Irene M. Ong

16 papers A* 1A 1B 4Misc 1Journal 5Unranked 4
YearRankTypeTitle / Venue / Authors
2025 J jnl
Bioinform.
Peng Liu, David Page, Paul Ahlquist, Irene M. Ong, Anthony Gitter
2025 conf
MLCB
Tapanmitra Ravi, Irene M. Ong
2024 J jnl
Bioinform.
Sean J. McIlwain, Anna Hoefges, Amy K. Erbe, Paul M. Sondel, Irene M. Ong
2023 J jnl
Bioinform.
Eli J. Larson, Melissa R. Pergande, Michelle E. Moss, Kalina J. Rossler, R. Kent Wenger, Boris Krichel, Harini Josyer, Jake A. Melby, David S. Roberts, Kyndalanne Pike, Zhuoxin Shi, Hsin-Ju Chan, Bridget Knight, Holden T. Rogers, Kyle A. Brown, Irene M. Ong, Kyowon Jeong, Michael T. Marty, Sean J. McIlwain, Ying Ge
2021 J jnl
Bioinform.
Zihao Zheng, Aisha M. Mergaert, Irene M. Ong, Miriam A. Shelef, Michael A. Newton
2016 conf
Image Perception, Observer Performance, and Technology Assessment
Yirong Wu, Craig K. Abbey, Jie Liu, Irene M. Ong, Peggy L. Peissig, Adedayo A. Onitilo, Jun Fan, Ming Yuan, Elizabeth S. Burnside
2016 J jnl
J. Mach. Learn. Res.
Jun Fan, Yirong Wu, Ming Yuan, David Page, Jie Liu, Irene M. Ong, Peggy L. Peissig, Elizabeth S. Burnside
2014 B conf
CBMS
António Gonçalves, Irene M. Ong, Jeffrey A. Lewis, Vítor Santos Costa
2014 B conf
CBMS
António Gonçalves, Irene M. Ong, Jeffrey A. Lewis, Vítor Santos Costa
2012 conf
ILP (Late Breaking Papers)
António Gonçalves, Irene M. Ong, Jeffrey A. Lewis, Vítor Santos Costa
2007 A* conf
IJCAI
Jesse Davis, Irene M. Ong, Jan Struyf, Elizabeth S. Burnside, David Page, Vítor Santos Costa
2006 Misc conf
Pacific Symposium on Biocomputing
C. David Page Jr., Irene M. Ong
2006 B conf
ILP
Irene M. Ong, Scott E. Topper, C. David Page Jr., Vítor Santos Costa
2005 conf
ECML
Irene M. Ong, Inês de Castro Dutra, David Page, Vítor Santos Costa
2004 B conf
ILP
Joseph Bockhorst, Irene M. Ong
2002 A conf
ISMB
Irene M. Ong, Jeremy D. Glasner, David Page
docker-build.sh
← Index docker-build.sh bash
#!/bin/bash

set -e

echo "Building REDB Docker image for linux/amd64 platform..."

# Function to tag the most recent <none> image
tag_unnamed_image() {
    local tag_name=$1
    local expected_size=$2
    
    # Get the most recent <none> image
    local image_id=$(docker images --filter "dangling=true" --format "{{.ID}}" | head -1)
    
    if [ -z "$image_id" ]; then
        echo "ERROR: No unnamed image found. Build may have failed."
        return 1
    fi
    
    local actual_size=$(docker images --format "table {{.ID}}\t{{.Size}}" | grep $image_id | awk '{print $2}')
    echo "Found image $image_id with size: $actual_size (expected: $expected_size)"
    
    # Tag the image
    echo "Tagging as $tag_name..."
    docker tag $image_id $tag_name
    
    return 0
}

# Build single unified image
echo ""
echo "Building REDB unified image - Supports both feature extraction and decompilation..."
echo "NOTE: If build hangs at 'exporting to image', press Ctrl+C - the image will still be created!"
echo ""

docker build --platform linux/amd64 -f Dockerfile -t redb:latest . || echo "Build interrupted (this is expected due to Docker Desktop bug)"

# Tag the image if it was built as unnamed
if docker images --filter "dangling=true" --format "{{.ID}}" | head -1 | grep -q "."; then
    tag_unnamed_image "redb:latest" "500MB"
fi

echo ""
echo "Docker build completed!"
echo ""
echo "Available images:"
docker images | grep redb

echo ""
echo "Image size:"
echo "REDB unified image: $(docker images redb:latest --format "{{.Size}}")"

echo ""
echo "Usage:"
echo "  Feature extraction: docker run redb:latest python3 start.py --nomad-job"
echo "  Decompilation:      docker run redb:latest python3 start.py --nomad-job --decompile"
echo "  Custom modules:     docker run redb:latest python3 start.py --nomad-job --modules BasicPropertiesExtractor,PEFeaturesExtractor"