Ira J. Kalet

13 papers Misc 5Journal 7Unranked 1
YearRankTypeTitle / Venue / Authors
2012 J jnl
J. Am. Medical Informatics Assoc.
Casimir A. Kulikowski, Edward H. Shortliffe, Leanne M. Currie, Peter L. Elkin, Lawrence E. Hunter, Todd R. Johnson, Ira J. Kalet, Leslie A. Lenert, Mark A. Musen, Judy G. Ozbolt, Jack W. Smith, Peter Tarczy-Hornoch, Jeffrey J. Williamson
2012 J jnl
J. Am. Medical Informatics Assoc.
Casey Lynnette Overby, Emily Beth Devine, Peter Tarczy-Hornoch, Ira J. Kalet
2010 J jnl
BMC Bioinform.
Casey Lynnette Overby, Peter Tarczy-Hornoch, Jim Hoath, Ira J. Kalet, David L. Veenstra
2009 J jnl
Artif. Intell. Medicine
Wade P. Smith, Jason N. Doctor, Jürgen Meyer, Ira J. Kalet, Mark H. Phillips
2009 J jnl
J. Biomed. Informatics
Ira J. Kalet, José L. V. Mejino Jr., Vania Wang, Mark Whipple, James F. Brinkley
2007 conf
ISBI
Chia-Chi Teng, Linda G. Shapiro, Ira J. Kalet, Carolyn M. Rutter, Rizwan Nurani
2006 Misc conf
AMIA
Noah Benson, Mark Whipple, Ira J. Kalet
2005 Misc conf
AMIA
Richard D. Boyce, Carol Collins, John R. Horn, Ira J. Kalet
2003 J jnl
J. Biomed. Informatics
Ira J. Kalet, Robert S. Giansiracusa, Jonathan Jacky, Drora Avitan
2002 Misc conf
AMIA
Ira J. Kalet, Mark Whipple, Silvia Pessah, Jerry Barker, Mary M. Austin-Seymour, Linda G. Shapiro
2002 Misc conf
AMIA
Chia-Chi Teng, Mary M. Austin-Seymour, Jerry Barker, Ira J. Kalet, Linda G. Shapiro, Mark Whipple
1999 Misc conf
AMIA
Ira J. Kalet, Jonn Wu, Matthew Lease, Mary M. Austin-Seymour, James F. Brinkley, Cornelius Rosse
1997 J jnl
J. Am. Medical Informatics Assoc.
Ira J. Kalet, Mary M. Austin-Seymour
redb/extractors/pe_extractors/pe_inconsistency_tests.py
← Index redb/extractors/pe_extractors/pe_inconsistency_tests.py python
import inspect
from redb.ext.spoof_check import (
    Result,
    checksum_test,
    duplicate_test,
    import_count_test,
    linker_test,
)
from redb.extractors.enum import Tag
from redb.extractors.pe_extractor import PEExtractor
from redb.models.dataclasses import (
    DotNetInconsistencyTests,
    PEInconsistencyTests,
)
from datetime import datetime, timezone
from typing import Any


class PEInconstistencyTestsExtractor(PEExtractor):
    """Collection of functions to perform features inconsistency tests

    A Test where the result is True means that there is an inconsistency.
    At the moments it runs a series of inconsistency tests on PE metadata from
    - spoof_check
    - pescanner
    - dotnetfile
    """

    def __init__(
        self,
        filepath,
        log,
        exporters=None,
        index_prefix=None,
        elastic_index=None,
        known_benign=False,
        known_malicious=False,
        pe=None,
        dotnet=None,
    ):
        super().__init__(
            filepath,
            log,
            exporters,
            index_prefix,
            elastic_index,
            known_benign,
            known_malicious,
            pe,
        )
        self.dotnet = dotnet if dotnet else None
        self.pe_inconsistency_tests = None
        self.dotnet_inconsistency_tests = None
        self.elastic_index = self.index_prefix + "-pe_inconsistency_tests"

    def tag(self):
        return [Tag.PE_INCONSISTENCY_TESTS.value, Tag.DOTNET_INCONSISTENCY_TESTS.value]

    def extract(self):
        self.log.debug(inspect.currentframe().f_code.co_name)
        tests_performed = False

        # Handle PE rich header tests
        try:
            rich_header = self.pe.parse_rich_header()
            if rich_header:
                self.pe_inconsistency_tests = PEInconsistencyTests(
                    test_rich_header_checksum=checksum_test(self.pe, rich_header) == Result.INVALID,
                    test_rich_header_duplicate=duplicate_test(self.pe, rich_header) == Result.INVALID,
                    test_rich_header_linker=linker_test(self.pe, rich_header) == Result.INVALID,
                    test_rich_header_import_count=import_count_test(self.pe, rich_header) == Result.INVALID,
                )
                tests_performed = True
            else:
                self.pe_inconsistency_tests = PEInconsistencyTests(
                    test_rich_header_checksum=None,
                    test_rich_header_duplicate=None,
                    test_rich_header_linker=None,
                    test_rich_header_import_count=None,
                )
        except Exception as e:
            self.log.error(f"Error processing rich header tests for {self.hash.sha256}: {e}")
            self.pe_inconsistency_tests = None

            # self.export_to_elastic([self.pe_inconsistency_tests])

        # Handle .NET tests
        try:
            if self._check_dotnet():
                if not self.dotnet:
                    self.dotnet, self.error = self._generate_dotnetfile_object()
                if self.error:
                    self.log.error(f"Error generating .NET object {self.hash.sha256}: {self.error}")
                self.dotnet_inconsistency_tests = DotNetInconsistencyTests(
                    test_dotnet_data_dir_hidden=self.dotnet.AntiMetadataAnalysis.is_dotnet_data_directory_hidden,
                    test_dotnet_extra_data=self.dotnet.AntiMetadataAnalysis.has_metadata_table_extra_data,
                    test_dotnet_fake_types=self.dotnet.AntiMetadataAnalysis.has_self_referenced_typeref_entries,
                    test_dotnet_invalid_type_ref=self.dotnet.AntiMetadataAnalysis.has_invalid_typeref_entries,
                    test_dotnet_fake_datastreams=self.dotnet.AntiMetadataAnalysis.has_fake_data_streams,
                    test_dotnet_extra_module_table=self.dotnet.AntiMetadataAnalysis.module_table_has_multiple_rows,
                    test_dotnet_extra_assembly_table=self.dotnet.AntiMetadataAnalysis.assembly_table_has_multiple_rows,
                    test_dotnet_invalid_strings_stream=self.dotnet.AntiMetadataAnalysis.has_invalid_strings_stream_entries,
                    test_dotnet_streams_mixed_case=self.dotnet.AntiMetadataAnalysis.has_mixed_case_stream_names,
                    test_dotnet_method_def_invalid_table=self.dotnet.AntiMetadataAnalysis.has_invalid_methoddef_entries,
                    test_dotnet_max_len_exceeding_strings=self.dotnet.AntiMetadataAnalysis.has_max_len_exceeding_strings,
                )
                tests_performed = True
        except Exception as e:
            self.log.error(f"Error processing .NET tests for {self.hash.sha256}: {e}")
            self.dotnet_inconsistency_tests = None

        # self.export_to_elastic([self.dotnet_inconsistency_tests])

        # If no tests were performed, return False to skip database insertion
        if not tests_performed:
            self.log.info("No inconsistency tests were performed.")
            return False

        return True

    def prepare_export_data(self, exporter_type: str) -> Any:
        if exporter_type == "ElasticsearchExporter":
            return [self.pe_inconsistency_tests, self.dotnet_inconsistency_tests]
        elif exporter_type == "ClickHouseExporter":
            current_time = datetime.now(timezone.utc)

            # For PE tests: if no rich header (all True), store NULL instead
            has_rich_header = any([
                hasattr(self.pe_inconsistency_tests, 'test_rich_header_checksum'),
                hasattr(self.pe_inconsistency_tests, 'test_rich_header_duplicate'),
                hasattr(self.pe_inconsistency_tests, 'test_rich_header_linker'),
                hasattr(self.pe_inconsistency_tests, 'test_rich_header_import_count')
            ])
            
            pe_tests = [
                None if not has_rich_header else self.pe_inconsistency_tests.test_rich_header_checksum,
                None if not has_rich_header else self.pe_inconsistency_tests.test_rich_header_duplicate,
                None if not has_rich_header else self.pe_inconsistency_tests.test_rich_header_linker,
                None if not has_rich_header else self.pe_inconsistency_tests.test_rich_header_import_count,
            ]
            
            # For .NET tests: if not a .NET file, store NULL instead of False
            dotnet_tests = [
                self.dotnet_inconsistency_tests.test_dotnet_data_dir_hidden if self.dotnet_inconsistency_tests else None,
                self.dotnet_inconsistency_tests.test_dotnet_extra_data if self.dotnet_inconsistency_tests else None,
                self.dotnet_inconsistency_tests.test_dotnet_fake_types if self.dotnet_inconsistency_tests else None,
                self.dotnet_inconsistency_tests.test_dotnet_invalid_type_ref if self.dotnet_inconsistency_tests else None,
                self.dotnet_inconsistency_tests.test_dotnet_fake_datastreams if self.dotnet_inconsistency_tests else None,
                self.dotnet_inconsistency_tests.test_dotnet_extra_module_table if self.dotnet_inconsistency_tests else None,
                self.dotnet_inconsistency_tests.test_dotnet_extra_assembly_table if self.dotnet_inconsistency_tests else None,
                self.dotnet_inconsistency_tests.test_dotnet_invalid_strings_stream if self.dotnet_inconsistency_tests else None,
                self.dotnet_inconsistency_tests.test_dotnet_streams_mixed_case if self.dotnet_inconsistency_tests else None,
                self.dotnet_inconsistency_tests.test_dotnet_method_def_invalid_table if self.dotnet_inconsistency_tests else None,
                self.dotnet_inconsistency_tests.test_dotnet_max_len_exceeding_strings if self.dotnet_inconsistency_tests else None,
            ]
            
            data = [[
                self.sha256,
                self.md5,
                self.sha1,
                *pe_tests,
                *dotnet_tests,
                current_time
            ]]

            column_names = [
                'sha256', 'md5', 'sha1',
                'test_rich_header_checksum', 'test_rich_header_duplicate', 'test_rich_header_linker', 'test_rich_header_import_count',
                'test_dotnet_data_dir_hidden', 'test_dotnet_extra_data',
                'test_dotnet_fake_types', 'test_dotnet_invalid_type_ref',
                'test_dotnet_fake_datastreams', 'test_dotnet_extra_module_table',
                'test_dotnet_extra_assembly_table', 'test_dotnet_invalid_strings_stream',
                'test_dotnet_streams_mixed_case', 'test_dotnet_method_def_invalid_table',
                'test_dotnet_max_len_exceeding_strings', 'analysis_date'
            ]
            
            column_type_names = [
                'FixedString(64)', 'FixedString(32)', 'FixedString(40)',
                'Nullable(Boolean)', 'Nullable(Boolean)', 'Nullable(Boolean)', 'Nullable(Boolean)',
                'Nullable(Boolean)', 'Nullable(Boolean)', 'Nullable(Boolean)', 'Nullable(Boolean)',
                'Nullable(Boolean)', 'Nullable(Boolean)', 'Nullable(Boolean)', 'Nullable(Boolean)',
                'Nullable(Boolean)', 'Nullable(Boolean)', 'Nullable(Boolean)',
                'DateTime64(3, \'UTC\')'
            ]

            if not data:
                return None

            return (data, column_names, column_type_names)

    def get_clickhouse_table(self) -> str:
        return "redb_pe_inconsistency_tests"