Ilene Karsch-Mizrachi

43 papers Journal 43
YearRankTypeTitle / Venue / Authors
2023 J jnl
GenBank 2023 update.
Nucleic Acids Res.
Eric W. Sayers, Mark Cavanaugh, Karen Clark, Kim D. Pruitt, Stephen T. Sherry, Linda Yankie, Ilene Karsch-Mizrachi
2022 J jnl
GenBank.
Nucleic Acids Res.
Eric W. Sayers, Mark Cavanaugh, Karen Clark, Kim D. Pruitt, Conrad L. Schoch, Stephen T. Sherry, Ilene Karsch-Mizrachi
2022 J jnl
Rapid automated validation, annotation and publication of SARS-CoV-2 sequences to GenBank.
Database J. Biol. Databases Curation
Beverly A. Underwood, Linda Yankie, Eric P. Nawrocki, Vasuki Palanigobu, Sergiy Gotvyanskyy, Vincent D. Calhoun, Michael Kornbluh, Thomas G. Smith, Lydia Fleischmann, Denis Sinyakov, Colleen J. Bollin, Ilene Karsch-Mizrachi
2021 J jnl
GenBank.
Nucleic Acids Res.
Eric W. Sayers, Mark Cavanaugh, Karen Clark, Kim D. Pruitt, Conrad L. Schoch, Stephen T. Sherry, Ilene Karsch-Mizrachi
2021 J jnl
Ribovore: ribosomal RNA sequence analysis for GenBank submissions and database curation.
BMC Bioinform.
Alejandro A. Schäffer, Richard McVeigh, Barbara Robbertse, Conrad L. Schoch, Anjanette Johnston, Beverly A. Underwood, Ilene Karsch-Mizrachi, Eric P. Nawrocki
2021 J jnl
The international nucleotide sequence database collaboration.
Nucleic Acids Res.
Masanori Arita, Ilene Karsch-Mizrachi, Guy Cochrane
2020 J jnl
GenBank.
Nucleic Acids Res.
Eric W. Sayers, Mark Cavanaugh, Karen Clark, James Ostell, Kim D. Pruitt, Ilene Karsch-Mizrachi
2020 J jnl
NCBI Taxonomy: a comprehensive update on curation, resources and tools.
Database J. Biol. Databases Curation
Conrad L. Schoch, Stacy Ciufo, Michael Domrachev, Carol L. Hotton, Sivakumar Kannan, Rogneda Khovanskaya, Detlef Leipe, Richard McVeigh, Kathleen O'Neill, Barbara Robbertse, Shobha Sharma, Vladimir Soussov, John P. Sullivan, Lu Sun, Seán Turner, Ilene Karsch-Mizrachi
2020 J jnl
VADR: validation and annotation of virus sequence submissions to GenBank.
BMC Bioinform.
Alejandro A. Schäffer, Eneida Hatcher, Linda Yankie, Lara Shonkwiler, J. Rodney Brister, Ilene Karsch-Mizrachi, Eric P. Nawrocki
2019 J jnl
GenBank.
Nucleic Acids Res.
Eric W. Sayers, Mark Cavanaugh, Karen Clark, James Ostell, Kim D. Pruitt, Ilene Karsch-Mizrachi
2019 J jnl
The NCBI BioCollections Database.
Database J. Biol. Databases Curation
Shobha Sharma, Stacy Ciufo, Elena Starchenko, Dakshesh Darji, Larry Chlumsky, Ilene Karsch-Mizrachi, Conrad L. Schoch
2018 J jnl
GenBank.
Nucleic Acids Res.
Dennis A. Benson, Mark Cavanaugh, Karen Clark, Ilene Karsch-Mizrachi, James Ostell, Kim D. Pruitt, Eric W. Sayers
2018 J jnl
The NCBI BioCollections Database.
Database J. Biol. Databases Curation
Shobha Sharma, Stacy Ciufo, Elena Starchenko, Dakshesh Darji, Larry Chlumsky, Ilene Karsch-Mizrachi, Conrad L. Schoch
2018 J jnl
The international nucleotide sequence database collaboration.
Nucleic Acids Res.
Ilene Karsch-Mizrachi, Toshihisa Takagi, Guy Cochrane
2018 J jnl
VecScreen_plus_taxonomy: imposing a tax(onomy) increase on vector contamination screening.
Bioinform.
Alejandro A. Schäffer, Eric P. Nawrocki, Yoon Choi, Paul A. Kitts, Ilene Karsch-Mizrachi, Richard McVeigh
2017 J jnl
GenBank.
Nucleic Acids Res.
Dennis A. Benson, Mark Cavanaugh, Karen Clark, Ilene Karsch-Mizrachi, David J. Lipman, James Ostell, Eric W. Sayers
2016 J jnl
GenBank.
Nucleic Acids Res.
Karen Clark, Ilene Karsch-Mizrachi, David J. Lipman, James Ostell, Eric W. Sayers
2016 J jnl
The International Nucleotide Sequence Database Collaboration.
Nucleic Acids Res.
Guy Cochrane, Ilene Karsch-Mizrachi, Toshihisa Takagi
2015 J jnl
GenBank.
Nucleic Acids Res.
Dennis A. Benson, Karen Clark, Ilene Karsch-Mizrachi, David J. Lipman, James Ostell, Eric W. Sayers
2014 J jnl
GenBank.
Nucleic Acids Res.
Dennis A. Benson, Karen Clark, Ilene Karsch-Mizrachi, David J. Lipman, James Ostell, Eric W. Sayers
2013 J jnl
GenBank.
Nucleic Acids Res.
Dennis A. Benson, Mark Cavanaugh, Karen Clark, Ilene Karsch-Mizrachi, David J. Lipman, James Ostell, Eric W. Sayers
2013 J jnl
The International Nucleotide Sequence Database Collaboration.
Nucleic Acids Res.
Yasukazu Nakamura, Guy Cochrane, Ilene Karsch-Mizrachi
2012 J jnl
BioProject and BioSample databases at NCBI: facilitating capture and organization of metadata.
Nucleic Acids Res.
Tanya Barrett, Karen Clark, Robert Gevorgyan, Vyatcheslav Gorelenkov, Eugene Gribov, Ilene Karsch-Mizrachi, Michael Kimelman, Kim D. Pruitt, Sergei Resenchuk, Tatiana A. Tatusova, Eugene Yaschenko, James Ostell
2012 J jnl
Database resources of the National Center for Biotechnology Information.
Nucleic Acids Res.
Eric W. Sayers, Tanya Barrett, Dennis A. Benson, Evan Bolton, Stephen H. Bryant, Kathi Canese, Vyacheslav Chetvernin, Deanna M. Church, Michael DiCuccio, Scott Federhen, Michael Feolo, Ian M. Fingerman, Lewis Y. Geer, Wolfgang Helmberg, Yuri Kapustin, Sergey Krasnov, David Landsman, David J. Lipman, Zhiyong Lu, Thomas L. Madden, Tom Madej, Donna R. Maglott, Aron Marchler-Bauer, Vadim Miller, Ilene Karsch-Mizrachi, James Ostell, Anna R. Panchenko, Lon Phan, Kim D. Pruitt, Gregory D. Schuler, Edwin Sequeira, Stephen T. Sherry, Martin Shumway, Karl Sirotkin, Douglas J. Slotta, Alexandre Souvorov, Grigory Starchenko, Tatiana A. Tatusova, Lukas Wagner, Yanli Wang, W. John Wilbur, Eugene Yaschenko, Jian Ye
2012 J jnl
GenBank.
Nucleic Acids Res.
Dennis A. Benson, Ilene Karsch-Mizrachi, Karen Clark, David J. Lipman, James Ostell, Eric W. Sayers
2012 J jnl
Recent advances in biocuration: Meeting Report from the fifth International Biocuration Conference.
Database J. Biol. Databases Curation
Pascale Gaudet, Cecilia N. Arighi, Frederic B. Bastian, Alex Bateman, Judith A. Blake, J. Michael Cherry, Peter D'Eustachio, Robert D. Finn, Michelle G. Giglio, Lynette Hirschman, Renate Kania, William Klimke, Maria Jesus Martin, Ilene Karsch-Mizrachi, Monica C. Munoz-Torres, Darren A. Natale, Claire O'Donovan, B. F. Francis Ouellette, Kim D. Pruitt, Marc Robinson-Rechavi, Susanna-Assunta Sansone, Paul N. Schofield, Granger G. Sutton, Kimberly Van Auken, Sona Vasudevan, Cathy H. Wu, Jasmine Young, Raja Mazumder
2012 J jnl
The International Nucleotide Sequence Database Collaboration.
Nucleic Acids Res.
Ilene Karsch-Mizrachi, Yasukazu Nakamura, Guy Cochrane
2011 J jnl
GenBank.
Nucleic Acids Res.
Dennis A. Benson, Ilene Karsch-Mizrachi, David J. Lipman, James Ostell, Eric W. Sayers
2011 J jnl
The International Nucleotide Sequence Database Collaboration.
Nucleic Acids Res.
Guy Cochrane, Ilene Karsch-Mizrachi, Yasukazu Nakamura
2011 J jnl
Towards BioDBcore: a community-defined information specification for biological databases.
Database J. Biol. Databases Curation
Pascale Gaudet, Amos Bairoch, Dawn Field, Susanna-Assunta Sansone, Chris F. Taylor, Teresa K. Attwood, Alex Bateman, Judith A. Blake, Carol J. Bult, J. Michael Cherry, Rex L. Chisholm, Guy Cochrane, Charles E. Cook, Janan T. Eppig, Michael Y. Galperin, Robert Gentleman, Carole A. Goble, Takashi Gojobori, John M. Hancock, Douglas G. Howe, Tadashi Imanishi, Janet Kelso, David Landsman, Suzanna E. Lewis, Ilene Karsch-Mizrachi, Sandra E. Orchard, B. F. Francis Ouellette, Shoba Ranganathan, Lorna J. Richardson, Philippe Rocca-Serra, Paul N. Schofield, Damian Smedley, Christopher Southan, Tin Wee Tan, Tatiana A. Tatusova, Patricia L. Whetzel, Owen White, Chisato Yamasaki
2011 J jnl
Towards BioDBcore: a community-defined information specification for biological databases.
Nucleic Acids Res.
Pascale Gaudet, Amos Bairoch, Dawn Field, Susanna-Assunta Sansone, Chris F. Taylor, Teresa K. Attwood, Alex Bateman, Judith A. Blake, Carol J. Bult, J. Michael Cherry, Rex L. Chisholm, Guy Cochrane, Charles E. Cook, Janan T. Eppig, Michael Y. Galperin, Robert Gentleman, Carole A. Goble, Takashi Gojobori, John M. Hancock, Douglas G. Howe, Tadashi Imanishi, Janet Kelso, David Landsman, Suzanna E. Lewis, Ilene Karsch-Mizrachi, Sandra E. Orchard, B. F. Francis Ouellette, Shoba Ranganathan, Lorna J. Richardson, Philippe Rocca-Serra, Paul N. Schofield, Damian Smedley, Christopher Southan, Tin Wee Tan, Tatiana A. Tatusova, Patricia L. Whetzel, Owen White, Chisato Yamasaki
2010 J jnl
GenBank.
Nucleic Acids Res.
Dennis A. Benson, Ilene Karsch-Mizrachi, David J. Lipman, James Ostell, Eric W. Sayers
2009 J jnl
Database resources of the National Center for Biotechnology Information.
Nucleic Acids Res.
Eric W. Sayers, Tanya Barrett, Dennis A. Benson, Stephen H. Bryant, Kathi Canese, Vyacheslav Chetvernin, Deanna M. Church, Michael DiCuccio, Ron Edgar, Scott Federhen, Michael Feolo, Lewis Y. Geer, Wolfgang Helmberg, Yuri Kapustin, David Landsman, David J. Lipman, Thomas L. Madden, Donna R. Maglott, Vadim Miller, Ilene Karsch-Mizrachi, James Ostell, Kim D. Pruitt, Gregory D. Schuler, Edwin Sequeira, Stephen T. Sherry, Martin Shumway, Karl Sirotkin, Alexandre Souvorov, Grigory Starchenko, Tatiana A. Tatusova, Lukas Wagner, Eugene Yaschenko, Jian Ye
2009 J jnl
GenBank.
Nucleic Acids Res.
Dennis A. Benson, Ilene Karsch-Mizrachi, David J. Lipman, James Ostell, Eric W. Sayers
2008 J jnl
GenBank.
Nucleic Acids Res.
Dennis A. Benson, Ilene Karsch-Mizrachi, David J. Lipman, James Ostell, David L. Wheeler
2007 J jnl
GenBank.
Nucleic Acids Res.
Dennis A. Benson, Ilene Karsch-Mizrachi, David J. Lipman, James Ostell, David L. Wheeler
2006 J jnl
GenBank.
Nucleic Acids Res.
Dennis A. Benson, Ilene Karsch-Mizrachi, David J. Lipman, James Ostell, David L. Wheeler
2005 J jnl
GenBank.
Nucleic Acids Res.
Dennis A. Benson, Ilene Karsch-Mizrachi, David J. Lipman, James Ostell, David L. Wheeler
2004 J jnl
GenBank: update.
Nucleic Acids Res.
Dennis A. Benson, Ilene Karsch-Mizrachi, David J. Lipman, James Ostell, David L. Wheeler
2003 J jnl
GenBank.
Nucleic Acids Res.
Dennis A. Benson, Ilene Karsch-Mizrachi, David J. Lipman, James Ostell, David L. Wheeler
2002 J jnl
GenBank.
Nucleic Acids Res.
Dennis A. Benson, Ilene Karsch-Mizrachi, David J. Lipman, James Ostell, Barbara A. Rapp, David L. Wheeler
2000 J jnl
GenBank.
Nucleic Acids Res.
Dennis A. Benson, Ilene Karsch-Mizrachi, David J. Lipman, James Ostell, Barbara A. Rapp, David L. Wheeler
1999 J jnl
Complete genomes in WWW Entrez: data representation and analysis.
Bioinform.
Tatiana A. Tatusova, Ilene Karsch-Mizrachi, James Ostell