Ian P. Barrett

15 papers Journal 15

Year	Rank	Type	Title / Venue / Authors
2026	J	`jnl`	RP3Net: a deep learning model for predicting recombinant protein production in Bioinform. Evgeny Tankhilevich, Sergio Martínez Cuesta, Ian P. Barrett, Carolina Berg, Lovisa Holmberg Schiavone, Andrew R. Leach
2025	J	`jnl`	The role of graph topology in the performance of biomedical Knowledge Graph Completion models. Bioinform. Alberto Cattaneo, Stephen Bonner, Thomas Martynec, Edward R. Morrissey, Carlo Luschi, Ian P. Barrett, Daniel Justus
2024	J	`jnl`	The Role of Graph Topology in the Performance of Biomedical Knowledge Graph Completion Models. CoRR Alberto Cattaneo, Stephen Bonner, Thomas Martynec, Carlo Luschi, Ian P. Barrett, Daniel Justus
2022	J	`jnl`	A Knowledge Graph-Enhanced Tensor Factorisation Model for Discovering Drug Targets. IEEE ACM Trans. Comput. Biol. Bioinform. Cheng Ye, Rowan Swiers, Stephen Bonner, Ian P. Barrett
2022	J	`jnl`	A review of biomedical datasets relating to drug discovery: a knowledge graph perspective. Briefings Bioinform. Stephen Bonner, Ian P. Barrett, Cheng Ye, Rowan Swiers, Ola Engkvist, Andreas Bender, Charles Tapley Hoyt, William L. Hamilton
2022	J	`jnl`	Implications of topological imbalance for representation learning on biomedical knowledge graphs. Briefings Bioinform. Stephen Bonner, Ufuk Kirik, Ola Engkvist, Jian Tang, Ian P. Barrett
2021	J	`jnl`	A Review of Biomedical Datasets Relating to Drug Discovery: A Knowledge Graph Perspective. CoRR Stephen Bonner, Ian P. Barrett, Cheng Ye, Rowan Swiers, Ola Engkvist, Andreas Bender, William L. Hamilton
2021	J	`jnl`	Comparison of Chemical Structure and Cell Morphology Information for Multitask Bioactivity Predictions. J. Chem. Inf. Model. Maria-Anna Trapotsi, Lewis H. Mervin, Avid M. Afzal, Noé Sturm, Ola Engkvist, Ian P. Barrett, Andreas Bender
2021	J	`jnl`	Implications of Topological Imbalance for Representation Learning on Biomedical Knowledge Graphs. CoRR Stephen Bonner, Ufuk Kirik, Ola Engkvist, Jian Tang, Ian P. Barrett
2021	J	`jnl`	Predicting Potential Drug Targets Using Tensor Factorisation and Knowledge Graph Embeddings. CoRR Cheng Ye, Rowan Swiers, Stephen Bonner, Ian P. Barrett
2021	J	`jnl`	Probabilistic Random Forest improves bioactivity predictions close to the classification threshold by taking into account experimental uncertainty. J. Cheminformatics Lewis H. Mervin, Maria-Anna Trapotsi, Avid M. Afzal, Ian P. Barrett, Andreas Bender, Ola Engkvist
2021	J	`jnl`	Understanding the Performance of Knowledge Graph Embeddings in Drug Discovery. CoRR Stephen Bonner, Ian P. Barrett, Cheng Ye, Rowan Swiers, Ola Engkvist, William L. Hamilton
2018	J	`jnl`	Orthologue chemical space and its influence on target prediction. Bioinform. Lewis H. Mervin, Krishna C. Bulusu, Leen Kalash, Avid M. Afzal, Fredrik Svensson, Mike A. Firth, Ian P. Barrett, Ola Engkvist, Andreas Bender
2016	J	`jnl`	Kinase Inhibition Leads to Hormesis in a Dual Phosphorylation-Dephosphorylation Cycle. PLoS Comput. Biol. Peter Rashkov, Ian P. Barrett, Robert E. Beardmore, Claus Bendtsen, Ivana Gudelj
2011	J	`jnl`	Automatic extraction of angiogenesis bioprocess from text. Bioinform. Xinglong Wang, Iain McKendrick, Ian P. Barrett, Ian Dix, Tim French, Jun'ichi Tsujii, Sophia Ananiadou