HyeongSik Kim

31 papers A* 1A 1B 1C 1Misc 1Journal 11Unranked 14
YearRankTypeTitle / Venue / Authors
2025 — conf
Over-Generation and Compaction: A Prompting Strategy for Procedural Text Adaptation with Large Language Models.
EMNLP (Findings)
HyeongSik Kim, Xu Yanheng, Chaoqun Dong, Fei Du
2024 J jnl
Structured Prompt Interrogation and Recursive Extraction of Semantics (SPIRES): a method for populating knowledge bases using zero-shot learning.
Bioinform.
J. Harry Caufield, Harshad Hegde, Vincent Emonet, Nomi L. Harris, Marcin P. Joachimiak, Nicolas Matentzoglu, HyeongSik Kim, Sierra A. T. Moxon, Justin T. Reese, Melissa A. Haendel, Peter N. Robinson, Christopher J. Mungall
2023 — conf
A Textual Dataset for Situated Proactive Response Selection.
ACL (1)
Naoki Otani, Jun Araki, HyeongSik Kim, Eduard H. Hovy
2023 — conf
A simple standard for ontological mappings 2023: updates on data model, collaborations and tooling.
OM@ISWC
Nicolas Matentzoglu, Ian Braun, Anita R. Caron, Damien Goutte-Gattat, Benjamin M. Gyori, Nomi L. Harris, Emily Hartley, Harshad B. Hegde, Sven Hertling, Charles Tapley Hoyt, HyeongSik Kim, Huanyu Li, James A. McLaughlin, Cássia Trojahn, Nicole A. Vasilevsky, Christopher J. Mungall
2023 J jnl
Gene Set Summarization using Large Language Models.
CoRR
Marcin P. Joachimiak, J. Harry Caufield, Nomi L. Harris, HyeongSik Kim, Christopher J. Mungall
2023 J jnl
MapperGPT: Large Language Models for Linking and Mapping Entities.
CoRR
Nicolas Matentzoglu, J. Harry Caufield, Harshad B. Hegde, Justin T. Reese, Sierra A. T. Moxon, HyeongSik Kim, Nomi L. Harris, Melissa A. Haendel, Christopher J. Mungall
2023 J jnl
Structured prompt interrogation and recursive extraction of semantics (SPIRES): A method for populating knowledge bases using zero-shot learning.
CoRR
J. Harry Caufield, Harshad Hegde, Vincent Emonet, Nomi L. Harris, Marcin P. Joachimiak, Nicolas Matentzoglu, HyeongSik Kim, Sierra A. T. Moxon, Justin T. Reese, Melissa A. Haendel, Peter N. Robinson, Christopher J. Mungall
2022 J jnl
A Simple Standard for Sharing Ontological Mappings (SSSOM).
Database J. Biol. Databases Curation
Nicolas Matentzoglu, James P. Balhoff, Susan M. Bello, Chris Bizon, Matthew H. Brush, Tiffany J. Callahan, Christopher G. Chute, William D. Duncan, Chris T. A. Evelo, Davera Gabriel, John B. Graybeal, Alasdair J. G. Gray, Benjamin M. Gyori, Melissa A. Haendel, Henriette Harmse, Nomi L. Harris, Ian Harrow, Harshad Hegde, Amelia L. Hoyt, Charles Tapley Hoyt, Dazhi Jiao, Ernesto Jiménez-Ruiz, Simon Jupp, HyeongSik Kim, Sebastian Köhler, Thomas Liener, Qinqin Long, James Malone, James A. McLaughlin, Julie A. McMurry, Sierra A. T. Moxon, Monica C. Munoz-Torres, David Osumi-Sutherland, James A. Overton, Bjoern Peters, Tim E. Putman, Núria Queralt-Rosinach, Kent A. Shefchek, Harold Solbrig, Anne E. Thessen, Tania Tudorache, Nicole A. Vasilevsky, Alex H. Wagner, Christopher J. Mungall
2022 — conf
A simple standard for ontological mappings 2022: updates of data model and outlook.
OM@ISWC
Nicolas Matentzoglu, Joe E. Flack, John B. Graybeal, Nomi L. Harris, Harshad B. Hegde, Charles Tapley Hoyt, HyeongSik Kim, Sabrina Toro, Nicole A. Vasilevsky, Christopher J. Mungall
2022 Misc conf
EaT-PIM: Substituting Entities in Procedural Instructions Using Flow Graphs and Embeddings.
ISWC
Sola S. Shirai, HyeongSik Kim
2022 J jnl
Ontology Development Kit: a toolkit for building, maintaining and standardizing biomedical ontologies.
Database J. Biol. Databases Curation
Nicolas Matentzoglu, Damien Goutte-Gattat, Shawn Zheng Kai Tan, James P. Balhoff, Seth Carbon, Anita R. Caron, William D. Duncan, Joe E. Flack, Melissa A. Haendel, Nomi L. Harris, William R. Hogan, Charles Tapley Hoyt, Rebecca C. Jackson, HyeongSik Kim, Hüseyin Kir, Martin Larralde, Julie A. McMurry, James A. Overton, Bjoern Peters, Clare Pilgrim, Raymund Stefancsik, Sofia M. C. Robb, Sabrina Toro, Nicole A. Vasilevsky, Ramona L. Walls, Christopher J. Mungall, David Osumi-Sutherland
2022 J jnl
Ontology Development Kit: a toolkit for building, maintaining, and standardising biomedical ontologies.
CoRR
Nicolas Matentzoglu, Damien Goutte-Gattat, Shawn Zheng Kai Tan, James P. Balhoff, Seth Carbon, Anita R. Caron, William D. Duncan, Joe E. Flack, Melissa A. Haendel, Nomi L. Harris, William R. Hogan, Charles Tapley Hoyt, Rebecca C. Jackson, HyeongSik Kim, Hüseyin Kir, Martin Larralde, Julie A. McMurry, James A. Overton, Bjoern Peters, Clare Pilgrim, Raymund Stefancsik, Sofia M. C. Robb, Sabrina Toro, Nicole A. Vasilevsky, Ramona L. Walls, Christopher J. Mungall, David Osumi-Sutherland
2021 J jnl
A Simple Standard for Sharing Ontological Mappings (SSSOM).
CoRR
Nicolas Matentzoglu, James P. Balhoff, Susan M. Bello, Chris Bizon, Matthew H. Brush, Tiffany J. Callahan, Christopher G. Chute, William D. Duncan, Chris T. A. Evelo, Davera Gabriel, John B. Graybeal, Alasdair J. G. Gray, Benjamin M. Gyori, Melissa A. Haendel, Henriette Harmse, Nomi L. Harris, Ian Harrow, Harshad Hegde, Amelia L. Hoyt, Charles Tapley Hoyt, Dazhi Jiao, Ernesto Jiménez-Ruiz, Simon Jupp, HyeongSik Kim, Sebastian Köhler, Thomas Liener, Qinqin Long, James Malone, James A. McLaughlin, Julie A. McMurry, Sierra A. T. Moxon, Monica C. Munoz-Torres, David Osumi-Sutherland, James A. Overton, Bjoern Peters, Tim E. Putman, Núria Queralt-Rosinach, Kent A. Shefchek, Harold Solbrig, Anne E. Thessen, Tania Tudorache, Nicole A. Vasilevsky, Alex H. Wagner, Christopher J. Mungall
2021 — conf
Neuro-Symbolic Deductive Reasoning for Cross-Knowledge Graph Entailment.
AAAI Spring Symposium: Combining Machine Learning with Knowledge Engineering
Monireh Ebrahimi, Md. Kamruzzaman Sarker, Federico Bianchi, Ning Xie, Aaron Eberhart, Derek Doran, HyeongSik Kim, Pascal Hitzler
2019 A conf
Semantic query transformations for increased parallelization in distributed knowledge graph query processing.
SC
HyeongSik Kim, Abhisha Bhattacharyya, Kemafor Anyanwu
2018 C conf
Scalable Exploratory Search on Knowledge Graphs Using Apache Spark.
WETICE
Avimanyu Mukhopadhyay, HyeongSik Kim, Kemafor Anyanwu
2017 — conf
A semantics-aware storage framework for scalable processing of knowledge graphs on Hadoop.
IEEE BigData
HyeongSik Kim, Padmashree Ravindra, Kemafor Anyanwu
2017 A* conf
Type-based Semantic Optimization for Scalable RDF Graph Pattern Matching.
WWW
HyeongSik Kim, Padmashree Ravindra, Kemafor Anyanwu
2016 B conf
Optimization of Complex SPARQL Analytical Queries.
EDBT
Padmashree Ravindra, HyeongSik Kim, Kemafor Anyanwu
2016 J jnl
Scalable Ontological Query Processing over Semantically Integrated Life Science Datasets using MapReduce.
CoRR
HyeongSik Kim, Kemafor Anyanwu
2015 — conf
Rewriting complex SPARQL analytical queries for efficient cloud-based processing.
IEEE BigData
Padmashree Ravindra, HyeongSik Kim, Kemafor Anyanwu
2014 — conf
A Semantics-Oriented Storage Model for Big Heterogeneous RDF Data.
ISWC (Posters & Demos)
HyeongSik Kim, Padmashree Ravindra, Kemafor Anyanwu
2014 — ch.
Algebraic Optimization of RDF Graph Pattern Queries on MapReduce.
Large Scale and Big Data
Kemafor Anyanwu, Padmashree Ravindra, HyeongSik Kim
2013 J jnl
Algebraic Optimization for Processing Graph Pattern Queries in the Cloud.
IEEE Internet Comput.
Kemafor Anyanwu, HyeongSik Kim, Padmashree Ravindra
2013 — conf
Optimizing RDF(S) queries on cloud platforms.
WWW (Companion Volume)
HyeongSik Kim, Padmashree Ravindra, Kemafor Anyanwu
2013 — conf
Optimizing queries over semantically integrated datasets on MapReduce platforms.
IEEE BigData
HyeongSik Kim, Kemafor Anyanwu
2013 — conf
Scaling concurrency of personalized Semantic search over Large RDF data.
IEEE BigData
Haizhou Fu, HyeongSik Kim, Kemafor Anyanwu
2012 — conf
Scan-Sharing for Optimizing RDF Graph Pattern Matching on MapReduce.
IEEE CLOUD
HyeongSik Kim, Padmashree Ravindra, Kemafor Anyanwu
2012 — conf
To nest or not to nest, when and how much: representing intermediate results of graph pattern queries in MapReduce based processing.
SWIM
Padmashree Ravindra, HyeongSik Kim, Kemafor Anyanwu
2011 — conf
An Intermediate Algebra for Optimizing RDF Graph Pattern Matching on MapReduce.
ESWC (2)
Padmashree Ravindra, HyeongSik Kim, Kemafor Anyanwu
2011 J jnl
From SPARQL to MapReduce: The Journey Using a Nested TripleGroup Algebra.
Proc. VLDB Endow.
HyeongSik Kim, Padmashree Ravindra, Kemafor Anyanwu