Huixiao Hong

45 papers Journal 40Unranked 5
YearRankTypeTitle / Venue / Authors
2024 J jnl
Editorial: Big data and artificial intelligence for genomics and therapeutics - Proceedings of the 19th Annual Meeting of the MidSouth Computational Biology and Bioinformatics Society (MCBIOS).
Frontiers Bioinform.
Huixiao Hong, Inimary Toby-Ogundeji, Robert J. Doerksen, Zhaohui Steve Qin
2023 J jnl
RxNorm for drug name normalization: a case study of prescription opioids in the FDA adverse events reporting system.
Frontiers Bioinform.
Huyen Le, Ru Chen, Stephen C. Harris, Hong Fang, Beverly Lyn-Cook, Huixiao Hong, Weigong Ge, Paul Rogers, Weida Tong, Wen Zou
2022 J jnl
An autoencoder-based deep learning method for genotype imputation.
Frontiers Artif. Intell.
Meng Song, Jonathan Greenbaum, Joseph Luttrell IV, Weihua Zhou, Chong Wu, Zhe Luo, Chuan Qiu, Lan Juan Zhao, Kuan-Jui Su, Qing Tian, Hui Shen, Huixiao Hong, Ping Gong, Xinghua Shi, Hong-Wen Deng, Chaoyang Zhang
2022 J jnl
Editorial: Unleashing Innovation on Precision Public Health-Highlights From the MCBIOS and MAQC 2021 Joint Conference.
Frontiers Artif. Intell.
Ramin Homayouni, Huixiao Hong, Prashanti Manda, Bindu Nanduri, Inimary T. Toby
2021 — conf
Discovering Drug-Drug Associations in the FDA Adverse Event Reporting System Database with Data Mining Approaches.
BIBM
Weizhong Zhao, Huyen Le, James J. Chen, Hesha J. Duggirala, Richard Forshee, Taxiarchis Botsis, Henry Francis, Huixiao Hong, Weida Tong, Yi-Ting Hwang, Wen Zou
2021 J jnl
Predictive Models to Identify Small Molecule Activators and Inhibitors of Opioid Receptors.
J. Chem. Inf. Model.
Srilatha Sakamuru, Jinghua Zhao, Menghang Xia, Huixiao Hong, Anton Simeonov, Iosif I. Vaisman, Ruili Huang
2021 — conf
Text Fingerprinting and Topic Mining in the Prescription Opioid Use Literature.
BIBM
Huyen Le, Junxiu Zhou, Weizhong Zhao, Roger Perkins, Weigong Ge, Beverly Lyn-Cook, Henry Francis, Huixiao Hong, Weida Tong, Wen Zou
2020 J jnl
Development of a Nicotinic Acetylcholine Receptor nAChR α7 Binding Activity Prediction Model.
J. Chem. Inf. Model.
Sugunadevi Sakkiah, Carmine Leggett, Bohu Pan, Wenjing Guo, Luis G. Valerio, Huixiao Hong
2020 J jnl
Structure-activity relationship-based chemical classification of highly imbalanced Tox21 datasets.
J. Cheminformatics
Gabriel Idakwo, Sundar Thangapandian, Joseph Luttrell IV, Yan Li, Nan Wang, Zhaoxian Zhou, Huixiao Hong, Bei Yang, Chaoyang Zhang, Ping Gong
2019 J jnl
Correction to: Similarities and differences between variants called with human reference genome HG19 or HG38.
BMC Bioinform.
Bohu Pan, Rebecca Kusko, Wenming Xiao, Yuanting Zheng, Zhichao Liu, Chunlin Xiao, Sugunadevi Sakkiah, Wenjing Guo, Ping Gong, Chaoyang Zhang, Weigong Ge, Leming Shi, Weida Tong, Huixiao Hong
2019 J jnl
Similarities and differences between variants called with human reference genome HG19 or HG38.
BMC Bioinform.
Bohu Pan, Rebecca Kusko, Wenming Xiao, Yuanting Zheng, Zhichao Liu, Chunlin Xiao, Sugunadevi Sakkiah, Wenjing Guo, Ping Gong, Chaoyang Zhang, Weigong Ge, Leming Shi, Weida Tong, Huixiao Hong
2018 J jnl
Comparative toxicogenomics of three insensitive munitions constituents 2, 4-dinitroanisole, nitroguanidine and nitrotriazolone in the soil nematode Caenorhabditis elegans.
BMC Syst. Biol.
Ping Gong, Keri B. Donohue, Anne M. Mayo, Yuping Wang, Huixiao Hong, Mitchell S. Wilbanks, Natalie D. Barker, Xin Guan, Kurt A. Gust
2018 J jnl
In Silico Pharmacoepidemiologic Evaluation of Drug-Induced Cardiovascular Complications Using Combined Classifiers.
J. Chem. Inf. Model.
Chuipu Cai, Jiansong Fang, Pengfei Guo, Qi Wang, Huixiao Hong, Javid Moslehi, Feixiong Cheng
2017 J jnl
Deep learning architectures for multi-label classification of intelligent health risk prediction.
BMC Bioinform.
Andrew S. Maxwell, Runzhi Li, Bei Yang, Heng Weng, Aihua Ou, Huixiao Hong, Zhaoxian Zhou, Ping Gong, Chaoyang Zhang
2017 — conf
Development of Nicotinic Acetylcholine Receptor nAChR α7 Binding Activity Prediction Model: Coupling Machine Learning with Competitive Molecular Docking.
BCB
Huixiao Hong, Carmine Leggett, Suguna Sakkiah
2017 J jnl
Individualized network-based drug repositioning infrastructure for precision oncology in the panomics era.
Briefings Bioinform.
Feixiong Cheng, Huixiao Hong, Sheng-Yong Yang, Yuquan Wei
2016 J jnl
A novel procedure on next generation sequencing data analysis using text mining algorithm.
BMC Bioinform.
Weizhong Zhao, James J. Chen, Roger Perkins, Yuping Wang, Zhichao Liu, Huixiao Hong, Weida Tong, Wen Zou
2016 J jnl
Erratum to: A novel procedure on next generation sequencing data analysis using text mining algorithm.
BMC Bioinform.
Weizhong Zhao, James J. Chen, Roger Perkins, Yuping Wang, Zhichao Liu, Huixiao Hong, Weida Tong, Wen Zou
2016 — conf
Factorial analysis of error correction performance using simulated next-generation sequencing data.
BIBM
Isaac Akogwu, Nan Wang, Chaoyang Zhang, Hwanseok Choi, Huixiao Hong, Ping Gong
2015 J jnl
Understanding and predicting binding between human leukocyte antigens (HLAs) and peptides by network analysis.
BMC Bioinform.
Heng Luo, Hao Ye, Hui Wen Ng, Leming Shi, Weida Tong, William Mattes, Donna Mendrick, Huixiao Hong
2014 J jnl
Competitive molecular docking approach for predicting estrogen receptor subtype α agonists and antagonists.
BMC Bioinform.
Hui Wen Ng, Wenqian Zhang, Mao Shu, Heng Luo, Weigong Ge, Roger Perkins, Weida Tong, Huixiao Hong
2014 J jnl
Whole genome sequencing of 35 individuals provides insights into the genetic architecture of Korean population.
BMC Bioinform.
Wenqian Zhang, Joe Meehan, Zhenqiang Su, Hui Wen Ng, Mao Shu, Heng Luo, Weigong Ge, Roger Perkins, Weida Tong, Huixiao Hong
2013 J jnl
Estimating relative noise to signal in DNA microarray data.
Int. J. Bioinform. Res. Appl.
Huixiao Hong, Qilong Hong, Jie Liu, Weida Tong, Leming Shi
2013 J jnl
Homology modeling, molecular docking, and molecular dynamics simulations elucidated α-fetoprotein binding modes.
BMC Bioinform.
Jie Shen, Wenqian Zhang, Hong Fang, Roger Perkins, Weida Tong, Huixiao Hong
2010 J jnl
Evaluation of gene expression data generated from expired Affymetrix GeneChip
BMC Bioinform.
Zhining Wen, Charles Wang, Quan Shi, Ying Huang, Zhenqiang Su, Huixiao Hong, Weida Tong, Leming Shi
2010 J jnl
The EDKB: an established knowledge base for endocrine disrupting chemicals.
BMC Bioinform.
Don Ding, Lei Xu, Hong Fang, Huixiao Hong, Roger Perkins, Steve Harris, Edward D. Bearden, Leming Shi, Weida Tong
2010 J jnl
Two new ArrayTrack libraries for personalized biomedical research.
BMC Bioinform.
Joshua Xu, Carolyn Wise, Vijayalakshmi Varma, Hong Fang, Baitang Ning, Huixiao Hong, Weida Tong, Jim Kaput
2009 — conf
Accurate Prediction and Recognition of Subfamilies of G Protein-Coupled Receptors from Amino Acid Sequences.
BIOCOMP
Huixiao Hong, Qilong Hong, Weida Tong
2009 J jnl
The Accurate Prediction of Protein Family from Amino Acid Sequence by Measuring Features of Sequence Fragments.
J. Comput. Biol.
Huixiao Hong, Qilong Hong, Roger Perkins, Leming M. Shi, Hong Fang, Zhenqiang Su, Yvonne P. Dragan, James C. Fuscoe, Weida Tong
2008 J jnl
Assessing batch effects of genotype calling algorithm BRLMM for the Affymetrix GeneChip Human Mapping 500 K array set using 270 HapMap samples.
BMC Bioinform.
Huixiao Hong, Zhenqiang Su, Weigong Ge, Leming M. Shi, Roger Perkins, Hong Fang, Joshua Xu, James J. Chen, Tao Han, Jim Kaput, James C. Fuscoe, Weida Tong
2008 J jnl
Mold
J. Chem. Inf. Model.
Huixiao Hong, Qian Xie, Weigong Ge, Feng Qian, Hong Fang, Leming Shi, Zhenqiang Su, Roger Perkins, Weida Tong
2008 J jnl
Very Important Pool (VIP) genes - an application for microarray-based molecular signatures.
BMC Bioinform.
Zhenqiang Su, Huixiao Hong, Hong Fang, Leming M. Shi, Roger Perkins, Weida Tong
2007 J jnl
Consensus analysis of multiple classifiers using non-repetitive variables: Diagnostic application to microarray gene expression data.
Comput. Biol. Chem.
Zhenqiang Su, Huixiao Hong, Roger Perkins, Xueguang Shao, Wensheng Cai, Weida Tong
2006 J jnl
Spec2D: A Structure Elucidation System Based on
J. Chem. Inf. Model.
Hideyuki Masui, Huixiao Hong
2005 J jnl
Bioinformatics approaches for cross-species liver cancer analysis based on microarray gene expression profiling.
BMC Bioinform.
Hong Fang, Weida Tong, Roger Perkins, Leming M. Shi, Huixiao Hong, X. Cao, Qian Xie, S. H. Yim, J. M. Ward, Henry C. Pitot, Yvonne P. Dragan
2005 J jnl
Cross-platform comparability of microarray technology: Intra-platform consistency and appropriate data analysis procedures are essential.
BMC Bioinform.
Leming M. Shi, Weida Tong, Hong Fang, Uwe Scherf, Jing Han, Raj K. Puri, Felix W. Frueh, Federico M. Goodsaid, Lei Guo, Zhenqiang Su, Tao Han, James C. Fuscoe, Z. Alex Xu, Tucker A. Patterson, Huixiao Hong, Qian Xie, Roger Perkins, James J. Chen, Daniel A. Casciano
2005 J jnl
Decision Forest Analysis of 61 Single Nucleotide Polymorphisms in a Case-Control Study of Esophageal Cancer; a novel method.
BMC Bioinform.
Qian Xie, Luke D. Ratnasinghe, Huixiao Hong, Roger Perkins, Ze-Zhong Tang, Nan Hu, Philip R. Taylor, Weida Tong
2005 J jnl
Microarray scanner calibration curves: characteristics and implications.
BMC Bioinform.
Leming M. Shi, Weida Tong, Zhenqiang Su, Tao Han, Jing Han, Raj K. Puri, Hong Fang, Felix W. Frueh, Federico M. Goodsaid, Lei Guo, William S. Branham, James J. Chen, Z. Alex Xu, Stephen C. Harris, Huixiao Hong, Qian Xie, Roger Perkins, James C. Fuscoe
2005 J jnl
Quality control and quality assessment of data from surface-enhanced laser desorption/ionization (SELDI) time-of flight (TOF) mass spectrometry (MS).
BMC Bioinform.
Huixiao Hong, Yvonne P. Dragan, Joshua Epstein, Candee Teitel, Bangzheng Chen, Qian Xie, Hong Fang, Leming M. Shi, Roger Perkins, Weida Tong
2003 J jnl
Decision Forest: Combining the Predictions of Multiple Independent Decision Tree Models.
J. Chem. Inf. Comput. Sci.
Weida Tong, Huixiao Hong, Hong Fang, Qian Xie, Roger Perkins
1995 J jnl
ESSESA: An expert system for structure elucidation from spectra, 6. Substructure constraints from analysis of 13C-NMR spectra.
J. Chem. Inf. Comput. Sci.
Huixiao Hong, Han Yinling, Xin Xinquan, Shi Yufeng
1994 J jnl
ESSESA: An Expert System for Structure Elucidation from Spectra. 4. Canonical Representation of Structures.
J. Chem. Inf. Comput. Sci.
Huixiao Hong, Xin Xinquan
1994 J jnl
ESSESA: An Expert System for Structure Elucidation from Spectra. 5. Substructure Constraints from Analysis of First-Order 1H-NMR Spectra.
J. Chem. Inf. Comput. Sci.
Huixiao Hong, Xin Xinquan
1992 J jnl
ESSESA: An expert system for structure elucidation from spectra. 3. LNSCS for chemical knowledge representation.
J. Chem. Inf. Comput. Sci.
Huixiao Hong, Xin Xinquan
1990 J jnl
ESSESA: an expert system for elucidation of structures from spectra. 1. Knowledge base of infrared spectra and analysis and interpretation programs.
J. Chem. Inf. Comput. Sci.
Huixiao Hong, Xin Xinquan