Huifeng Zhao

22 papers A* 1B 2Journal 18Unranked 1
YearRankTypeTitle / Venue / Authors
2025 J jnl
Benchmarking AI-powered docking methods from the perspective of virtual screening.
Nat. Mac. Intell.
Shukai Gu, Chao Shen, Xujun Zhang, Huiyong Sun, Heng Cai, Hao Luo, Huifeng Zhao, Bo Liu, Hongyan Du, Yihao Zhao, Chenggong Fu, Silong Zhai, Yafeng Deng, Huanxiang Liu, Tingjun Hou, Yu Kang
2025 J jnl
Deep lead optimization enveloped in protein pocket and its application in designing potent and selective ligands targeting LTK protein.
Nat. Mac. Intell.
Shicheng Chen, Odin Zhang, Chenran Jiang, Huifeng Zhao, Xujun Zhang, Mengting Chen, Yun Liu, Qun Su, Zhenxing Wu, Xinyue Wang, Wanglin Qu, Yuanyi Ye, Xin Chai, Ning Wang, Tianyue Wang, Yuan An, Guanlin Wu, Qianqian Yang, Jiean Chen, Wei Xie, Haitao Lin, Dan Li, Chang-Yu Hsieh, Yong Huang, Yu Kang, Tingjun Hou, Peichen Pan
2025 J jnl
Durian: A Comprehensive Benchmark for Structure-Based 3D Molecular Generation.
J. Chem. Inf. Model.
Dou Nie, Huifeng Zhao, Odin Zhang, Gaoqi Weng, Hui Zhang, Jieyu Jin, Haitao Lin, Yufei Huang, Liwei Liu, Dan Li, Tingjun Hou, Yu Kang
2025 J jnl
ECloudGen: leveraging electron clouds as a latent variable to scale up structure-based molecular design.
Nat. Comput. Sci.
Odin Zhang, Jieyu Jin, Zhenxing Wu, Jintu Zhang, Po Yuan, Yuntao Yu, Haitao Lin, Haiyang Zhong, Xujun Zhang, Chenqing Hua, Weibo Zhao, Zhengshuo Zhang, Kejun Ying, Yufei Huang, Huifeng Zhao, Yu Kang, Peichen Pan, Jike Wang, Dong Guo, Shuangjia Zheng, Chang-Yu Hsieh, Tingjun Hou
2025 J jnl
Improving the predictive performance of binding affinities and poses for protein-cyclic peptide complexes through fine-tuned MM/PBSA(GBSA)-based methods.
Briefings Bioinform.
Huifeng Zhao, Jianxiang Huang, Gaoqi Weng, Dejun Jiang, Renling Hu, Yu Kang, Tingjun Hou
2025 J jnl
Multi-Dimensional Analysis of Dairy Production Costs and Optimization of Consumption Reduction Strategies Based on Deep Learning and Causal reasoning.
IEEE Access
Xin Liu, Yuanpei Cui, Yanan Zhang, Huifeng Zhao
2025 J jnl
PepPCBench is a Comprehensive Benchmarking Framework for Protein-Peptide Complex Structure Prediction.
J. Chem. Inf. Model.
Silong Zhai, Huifeng Zhao, Jike Wang, Shaolong Lin, Tiantao Liu, Shukai Gu, Dejun Jiang, Huanxiang Liu, Yu Kang, Xiaojun Yao, Tingjun Hou
2024 J jnl
Comprehensive Evaluation of 10 Docking Programs on a Diverse Set of Protein-Cyclic Peptide Complexes.
J. Chem. Inf. Model.
Huifeng Zhao, Dejun Jiang, Chao Shen, Jintu Zhang, Xujun Zhang, Xiaorui Wang, Dou Nie, Tingjun Hou, Yu Kang
2024 J jnl
Deep Geometry Handling and Fragment-wise Molecular 3D Graph Generation.
CoRR
Odin Zhang, Yufei Huang, Shichen Cheng, Mengyao Yu, Xujun Zhang, Haitao Lin, Yundian Zeng, Mingyang Wang, Zhenxing Wu, Huifeng Zhao, Zaixi Zhang, Chenqing Hua, Yu Kang, Sunliang Cui, Peichen Pan, Chang-Yu Hsieh, Tingjun Hou
2024 J jnl
Deep Lead Optimization: Leveraging Generative AI for Structural Modification.
CoRR
Odin Zhang, Haitao Lin, Hui Zhang, Huifeng Zhao, Yufei Huang, Yuansheng Huang, Dejun Jiang, Chang-Yu Hsieh, Peichen Pan, Tingjun Hou
2024 J jnl
Leveraging language model for advanced multiproperty molecular optimization via prompt engineering.
Nat. Mac. Intell.
Zhenxing Wu, Odin Zhang, Xiaorui Wang, Li Fu, Huifeng Zhao, Jike Wang, Hongyan Du, Dejun Jiang, Yafeng Deng, Dong-Sheng Cao, Chang-Yu Hsieh, Tingjun Hou
2024 A* conf
PPFLOW: Target-Aware Peptide Design with Torsional Flow Matching.
ICML
Haitao Lin, Odin Zhang, Huifeng Zhao, Dejun Jiang, Lirong Wu, Zicheng Liu, Yufei Huang, Stan Z. Li
2024 J jnl
PPFlow: Target-aware Peptide Design with Torsional Flow Matching.
CoRR
Haitao Lin, Odin Zhang, Huifeng Zhao, Dejun Jiang, Lirong Wu, Zicheng Liu, Yufei Huang, Stan Z. Li
2024 J jnl
Token-Mol 1.0: Tokenized drug design with large language model.
CoRR
Jike Wang, Rui Qin, Mingyang Wang, Meijing Fang, Yangyang Zhang, Yuchen Zhu, Qun Su, Qiaolin Gou, Chao Shen, Odin Zhang, Zhenxing Wu, Dejun Jiang, Xujun Zhang, Huifeng Zhao, Xiaozhe Wan, Zhourui Wu, Liwei Liu, Yu Kang, Chang-Yu Hsieh, Tingjun Hou
2023 J jnl
Infinite Physical Monkey: Do Deep Learning Methods Really Perform Better in Conformation Generation?
CoRR
Haotian Zhang, Jintu Zhang, Huifeng Zhao, Dejun Jiang, Yafeng Deng
2023 J jnl
Learning on topological surface and geometric structure for 3D molecular generation.
Nat. Comput. Sci.
Odin Zhang, Tianyue Wang, Gaoqi Weng, Dejun Jiang, Ning Wang, Xiaorui Wang, Huifeng Zhao, Jialu Wu, Ercheng Wang, Guangyong Chen, Yafeng Deng, Peichen Pan, Yu Kang, Chang-Yu Hsieh, Tingjun Hou
2022 J jnl
ANFIS-EKF-Based Single-Beacon Localization Algorithm for AUV.
Remote. Sens.
Wanlong Zhao, Huifeng Zhao, Gongliang Liu, Guoyao Zhang
2022 B conf
High Myopia Detection Method On Fundus Images Based On Curriculum Learning.
COMPSAC
Huifeng Zhao, Zhilong Ma, Yu Guan, Jianqiang Li, Yu-Chih Wei
2021 J jnl
A Novel Factor Graph and Cubature Kalman Filter Integrated Algorithm for Single-Transponder-Aided Cooperative Localization.
Entropy
Wanlong Zhao, Huifeng Zhao, Deyue Zou, Lu Liu
2021 B conf
A Single Beacon-aided Cooperative Localization Algorithm based on Maximum Correntropy Criterion.
IWCMC
Wanlong Zhao, Huifeng Zhao, Lu Liu
2021 J jnl
Dairy brand loyalty measurement model based on machine learning clustering algorithm.
J. Intell. Fuzzy Syst.
Xiujuan Liu, Huifeng Zhao
2009 — conf
Study on Application of Data Mining Technology to Modern Logistics Management Decision.
IFITA (3)
Congna Quan, Huifeng Zhao, Bo Li