Hugues Richard

15 papers Journal 12Unranked 1
YearRankTypeTitle / Venue / Authors
2022 J jnl
ASES: visualizing evolutionary conservation of alternative splicing in proteins.
Bioinform.
Diego Javier Zea, Hugues Richard, Elodie Laine
2022 J jnl
CovRadar: continuously tracking and filtering SARS-CoV-2 mutations for genomic surveillance.
Bioinform.
Alice Wittig, Fábio Miranda, Martin Hölzer, Tom Altenburg, Jakub M. Bartoszewicz, Sebastian Beyvers, Marius A. Dieckmann, Ulrich Genske, Sven H. Giese, Melania Nowicka, Hugues Richard, Henning Schiebenhoefer, Anna-Juliane Schmachtenberg, Paul Sieben, Ming Tang, Julius Tembrockhaus, Bernhard Y. Renard, Stephan Fuchs
2022 — book
Statistical methods for analysing high throughput sequencing data. (Méthodes statistiques pour l'analyse des données de séquençage à haut débit).
Hugues Richard
2020 J jnl
Targeted domain assembly for fast functional profiling of metagenomic datasets with S3A.
Bioinform.
Laurent David, Riccardo Vicedomini, Hugues Richard, Alessandra Carbone
2018 J jnl
DiNAMO: highly sensitive DNA motif discovery in high-throughput sequencing data.
BMC Bioinform.
Chadi Saad, Laurent Noé, Hugues Richard, Julie Leclerc, Marie-Pierre Buisine, Hélène Touzet, Martin Figeac
2018 J jnl
Meet-U: Educating through research immersion.
PLoS Comput. Biol.
Nika Abdollahi, Alexandre Albani, Éric Anthony, Agnes Baud, Mélissa Cardon, Robert Clerc, Dariusz Czernecki, Romain Conte, Laurent David, Agathe Delaune, Samia Djerroud, Pauline Fourgoux, Nadège Guiglielmoni, Jeanne Laurentie, Nathalie Lehmann, Camille Lochard, Rémi Montagne, Vasiliki Myrodia, Vaitea Opuu, Elise Parey, Lélia Polit, Sylvain Privé, Chloé Quignot, Maria Ruiz-Cuevas, Mariam Sissoko, Nicolas Sompairac, Audrey Vallerix, Violaine Verrecchia, Marc Delarue, Raphaël Guérois, Yann Ponty, Sophie Sacquin-Mora, Alessandra Carbone, Christine Froidevaux, Stéphane Le Crom, Olivier Lespinet, Martin Weigt, Samer Abboud, Juliana S. Bernardes, Guillaume Bouvier, Chloé Dequeker, Arnaud Ferré, Patrick Fuchs, Gaëlle Lelandais, Pierre Poulain, Hugues Richard, Hugo Schweke, Elodie Laine, Anne Lopes
2017 — ch.
DNA-Seq Error Correction Based on Substring Indices.
Algorithms for Next-Generation Sequencing Data
David Weese, Marcel H. Schulz, Hugues Richard
2015 J jnl
Ulysses: accurate detection of low-frequency structural variations in large insert-size sequencing libraries.
Bioinform.
Alexandre Gillet-Markowska, Hugues Richard, Gilles Fischer, Ingrid Lafontaine
2014 J jnl
Fiona: a parallel and automatic strategy for read error correction.
Bioinform.
Marcel H. Schulz, David Weese, Manuel Holtgrewe, Viktoria Dimitrova, Sijia Niu, Knut Reinert, Hugues Richard
2014 J jnl
Parseq: reconstruction of microbial transcription landscape from RNA-Seq read counts using state-space models.
Bioinform.
Bogdan Mirauta, Pierre Nicolas, Hugues Richard
2013 — conf
Pardiff: Inference of Differential Expression at Base-Pair Level from RNA-Seq Experiments.
ICIAP Workshops
Bogdan Mirauta, Pierre Nicolas, Hugues Richard
2005 J jnl
seq++: analyzing biological sequences with a range of Markov-related models.
Bioinform.
Vincent Miele, Pierre-Yves Bourguignon, David Robelin, Grégory Nuel, Hugues Richard
2003 J jnl
SIC: a tool to detect short inverted segments in a biological sequence.
Nucleic Acids Res.
David Robelin, Hugues Richard, Bernard Prum
2003 J jnl
SPA: simple web tool to assess statistical significance of DNA patterns.
Nucleic Acids Res.
Hugues Richard, Grégory Nuel
2002 J jnl
Occurrence Probability of Structured Motifs in Random Sequences.
J. Comput. Biol.
Stéphane Robin, Jean-Jacques Daudin, Hugues Richard, Marie-France Sagot, Sophie Schbath