Hugh P. Shanahan

20 papers Journal 16Unranked 3
YearRankTypeTitle / Venue / Authors
2026 J jnl
Building Responsible and Sustainable Open Data Literacy Skills for Early Career Researchers: A Decade of the SoRDS Programme.
Data Sci. J.
Shaily Gandhi, Steve Diggs, Marcela Alfaro Cordoba, Louise Bezuidenhout, Raphael Cobe, Sara El Jadid, Bianca Peterson, Robert Quick, Hugh P. Shanahan, Shanmugasundaram Venkataraman, Ekpe Okorafor, Veerle Van den Eynden
2025 J jnl
Institutional Policy Pathways for Supporting Research Software: Global Trends and Local Practices.
CoRR
Michelle Barker, Jeremy Cohen, Pedro Hernandez Serrano, Daniel S. Katz, Kim Martin, Dan Rudmann, Hugh P. Shanahan
2023 — conf
Foundational Data Science Training for Health Equity Researchers at Minority Serving Institutions: A SoRDS Event.
ICHI
Robert Quick, Marcela Alfaro Cordoba, Stephen Diggs, Raphael Cobe, Louise Bezuidenhout, Hugh P. Shanahan, Bianca Peterson
2023 J jnl
Intra-Exon Motif Correlations as a Proxy Measure for Mean Per-Tile Sequence Quality Data in RNA-Seq.
J. Comput. Biol.
Jamie J. Alnasir, Hugh P. Shanahan
2022 J jnl
Rethinking the A in FAIR Data: Issues of Data Access and Accessibility in Research.
Frontiers Res. Metrics Anal.
Hugh P. Shanahan, Louise Bezuidenhout
2021 J jnl
A School and a Network: CODATA-RDA Data Science Summer Schools Alumni Survey.
Data Sci. J.
Louise Bezuidenhout, Sara Drummond-Curtis, Bridget Walker, Hugh P. Shanahan, Marcela Alfaro Cordoba
2021 J jnl
Progress toward a comprehensive teaching approach to the FAIR data principles.
Patterns
Hugh P. Shanahan, Nancy Hoebelheinrich, Angus Whyte
2020 J jnl
"Ethics When You Least Expect It": A Modular Approach to Short Course Data Ethics Instruction.
Sci. Eng. Ethics
Louise Bezuidenhout, Robert Quick, Hugh P. Shanahan
2020 J jnl
Helping the Consumers and Producers of Standards, Repositories and Policies to Enable FAIR Data.
Data Intell.
Peter McQuilton, Dominique Batista, Oya Beyan, Ramón Granell, Simon J. Coles, Massimiliano Izzo, Allyson L. Lister, Robert Pergl, Philippe Rocca-Serra, Ben Schaap, Hugh P. Shanahan, Milo Thurston, Susanna-Assunta Sansone
2020 J jnl
The CODATA-RDA Data Steward School.
Int. J. Digit. Curation
Daniel Bangert, Joy Davidson, Steve Diggs, Marjan Grootveld, Hugh P. Shanahan, Shanmugasundaram Venkataraman
2020 J jnl
The application of Hadoop in structural bioinformatics.
Briefings Bioinform.
Jamie J. Alnasir, Hugh P. Shanahan
2019 J jnl
The FAIR Funder pilot programme to make it easy for funders to require and for grantees to produce FAIR Data.
CoRR
Peter Wittenburg, Hana Pergl Sustkova, Annalisa Montesanti, Margreet Bloemers, S. H. de Waard, Mark A. Musen, John B. Graybeal, Kristina M. Hettne, Annika Jacobsen, Robert Pergl, Rob W. W. Hooft, Christine Staiger, Celia W. G. van Gelder, Sebastiaan L. Knijnenburg, A. C. van Arkel, Bert Meerman, Mark D. Wilkinson, Susanna-Assunta Sansone, Philippe Rocca-Serra, Peter McQuilton, Alejandra N. González-Beltrán, G. J. C. Aben, Patrícia Henning, Maria Simone de Menezes Alencar, C. Ribeiro, C. R. L. Silva, Luís Fernando Sayão, Luana Sales, Viviane Veiga, Jefferson Lima, Simone Dib, Paula Xavier dos Santos, R. Murtinho, Jakob Tendel, B. F. Schaap, P. M. Brouwer, A. K. Gavai, Yamine Bouzembrak, Hans J. P. Marvin, Albert Mons, Tobias Kuhn, Alessa A. Gambardella, Ricardo de Miranda Azevedo, Vesa Muhonen, Mira van der Naald, N. W. Smit, M. J. Buys, Taco F. de Bruin, Fieke Schoots, H. J. E. Goodson, Henry S. Rzepa, Keith G. Jeffery, Hugh P. Shanahan, M. Axton, Veniamin Tkachenko, Anne Deslattes Mays, Natalie Meyers, Michael Conlon, Laurel L. Haak, Erik A. Schultes
2018 — conf
Systems Metagenomics: Applying Systems Biology Thinking to Human Microbiome Analysis.
CMSB
Golestan Sally Radwan, Hugh P. Shanahan
2018 J jnl
Transcriptomics: Quantifying Non-Uniform Read Distribution Using MapReduce.
Int. J. Found. Comput. Sci.
Jamie J. Alnasir, Hugh P. Shanahan
2017 J jnl
A Novel Method to Detect Bias in Short Read NGS Data.
J. Integr. Bioinform.
Jamie J. Alnasir, Hugh P. Shanahan
2017 J jnl
Biological Big Bytes: Integrative Analysis of Large Biological Datasets.
J. Integr. Bioinform.
Ming Chen, Andrew P. Harrison, Hugh P. Shanahan, Yuriy L. Orlov
2014 — ch.
An Overview of Gene Regulation.
Approaches in Integrative Bioinformatics
Andrew P. Harrison, Hugh P. Shanahan
2009 — conf
Can we improve on the identification of transcription factor binding sites?
KDD Workshop on Statistical and Relational Learning in Bioinformatics
Hugh P. Shanahan
2005 J jnl
HTHquery: a method for detecting DNA-binding proteins with a helix-turn-helix structural motif.
Bioinform.
Carles Ferrer-Costa, Hugh P. Shanahan, Susan Jones, Janet M. Thornton
2004 J jnl
An examination of the conservation of surface patch polarity for proteins.
Bioinform.
Hugh P. Shanahan, Janet M. Thornton