Hsuan-Cheng Huang

23 papers C 1Journal 20Unranked 2
YearRankTypeTitle / Venue / Authors
2026 J jnl
scDock: streamlining drug discovery targeting cell-cell communication via scRNA-seq analysis and molecular docking.
Bioinform.
Chen-Hao Huang, Yen-Jen Oyang, Hsuan-Cheng Huang, Hsueh-Fen Juan
2023 J jnl
BIC: a database for the transcriptional landscape of bacteria in cancer.
Nucleic Acids Res.
Kai-Pu Chen, Chia-Lang Hsu, Yen-Jen Oyang, Hsuan-Cheng Huang, Hsueh-Fen Juan
2023 J jnl
Context-dependent gene regulatory network reveals regulation dynamics and cell trajectories using unspliced transcripts.
Briefings Bioinform.
Yueh-Hua Tu, Hsueh-Fen Juan, Hsuan-Cheng Huang
2022 J jnl
Phylotranscriptomic patterns of network stochasticity and pathway dynamics during embryogenesis.
Bioinform.
Kuei-Yueh Ko, Cho-Yi Chen, Hsueh-Fen Juan, Hsuan-Cheng Huang
2021 J jnl
DockCoV2: a drug database against SARS-CoV-2.
Nucleic Acids Res.
Ting-Fu Chen, Yu-Chuan Chang, Yi Hsiao, Ko-Han Lee, Yu-Chun Hsiao, Yu-Hsiang Lin, Yi-Chin Ethan Tu, Hsuan-Cheng Huang, Chien-Yu Chen, Hsueh-Fen Juan
2020 — conf
Refined Prediction of Mouse and Human Actions Based on A Data-Selective Multiple-Stage Approach of 3D Convolutional Neural Networks.
TAAI
Chia-Ying Wu, Arthur Chun-Chieh Shih, Hsuan-Cheng Huang, Chun-Ping Yu, Chien-Chang Chen
2019 J jnl
Regulatory feedback loops bridge the human gene regulatory network and regulate carcinogenesis.
Briefings Bioinform.
Yun-Ru Chen, Hsuan-Cheng Huang, Chen-Ching Lin
2017 J jnl
DynaPho: a web platform for inferring the dynamics of time-series phosphoproteomics.
Bioinform.
Chia-Lang Hsu, Jiankai Wang, Pei-Chun Lu, Hsuan-Cheng Huang, Hsueh-Fen Juan
2015 J jnl
Circadian systems biology in Metazoa.
Briefings Bioinform.
Li-Ling Lin, Hsuan-Cheng Huang, Hsueh-Fen Juan
2014 J jnl
Mirin: identifying microRNA regulatory modules in protein-protein interaction networks.
Bioinform.
Ken-Chi Yang, Chia-Lang Hsu, Chen-Ching Lin, Hsueh-Fen Juan, Hsuan-Cheng Huang
2013 J jnl
ValidNESs: a database of validated leucine-rich nuclear export signals.
Nucleic Acids Res.
Szu-Chin Fu, Hsuan-Cheng Huang, Paul Horton, Hsueh-Fen Juan
2012 J jnl
Crosstalk between transcription factors and microRNAs in human protein interaction network.
BMC Syst. Biol.
Chen-Ching Lin, Ya-Jen Chen, Cho-Yi Chen, Yen-Jen Oyang, Hsueh-Fen Juan, Hsuan-Cheng Huang
2012 J jnl
Lengthening of 3′UTR increases with morphological complexity in animal evolution.
Bioinform.
Cho-Yi Chen, Shui-Tein Chen, Hsueh-Fen Juan, Hsuan-Cheng Huang
2011 J jnl
Coregulation of transcription factors and microRNAs in human transcriptional regulatory network.
BMC Bioinform.
Cho-Yi Chen, Shui-Tein Chen, Chiou-Shann Fuh, Hsueh-Fen Juan, Hsuan-Cheng Huang
2011 J jnl
Integrative network analysis reveals active microRNAs and their functions in gastric cancer.
BMC Syst. Biol.
Chien-Wei Tseng, Chen-Ching Lin, Chiung-Nien Chen, Hsuan-Cheng Huang, Hsueh-Fen Juan
2011 — conf
Prediction of Essential Genes by Mining Gene Ontology Semantics.
ISBRA
Yu-Cheng Liu, Po-I Chiu, Hsuan-Cheng Huang, Vincent S. Tseng
2010 J jnl
Dynamic functional modules in co-expressed protein interaction networks of dilated cardiomyopathy.
BMC Syst. Biol.
Chen-Ching Lin, Jen-Tsung Hsiang, Chia-Yi Wu, Yen-Jen Oyang, Hsueh-Fen Juan, Hsuan-Cheng Huang
2010 J jnl
Modularity of Escherichia coli sRNA regulation revealed by sRNA-target and protein network analysis.
BMC Bioinform.
Timothy H. Wu, Ian Chang, Lichieh Julie Chu, Hsuan-Cheng Huang, Wailap V. Ng
2008 J jnl
MeInfoText: associated gene methylation and cancer information from text mining.
BMC Bioinform.
Yu-Ching Fang, Hsuan-Cheng Huang, Hsueh-Fen Juan
2006 J jnl
An agent-based system to discover protein-protein interactions, identify protein complexes and proteins with multiple peptide mass fingerprints.
J. Comput. Chem.
Tzong-Yi Lee, Jorng-Tzong Horng, Hsueh-Fen Juan, Hsien-Da Huang, Li-Cheng Wu, Meng-Feng Tsai, Hsuan-Cheng Huang
2004 C conf
An Efficient Mechanism for Prediction of Protein-Ligand Interactions Based on Analysis of Protein Tertiary Substructures.
BIBE
Darby Tien-Hao Chang, Chien-Yu Chen, Yen-Jen Oyang, Hsueh-Fen Juan, Hsuan-Cheng Huang
2004 J jnl
GeneNetwork: an interactive tool for reconstruction of genetic networks using microarray data.
Bioinform.
Chia-Chin Wu, Hsuan-Cheng Huang, Hsueh-Fen Juan, Shui-Tein Chen
2004 J jnl
ProteMiner-SSM: a web server for efficient analysis of similar protein tertiary substructures.
Nucleic Acids Res.
Darby Tien-Hao Chang, Chien-Yu Chen, Wen-Chin Chung, Yen-Jen Oyang, Hsueh-Fen Juan, Hsuan-Cheng Huang