Hosein Mohimani

13 papers A 1B 3C 1Journal 7Unranked 1
YearRankTypeTitle / Venue / Authors
2025 J jnl
Identifying variants of molecules through database search of mass spectra.
Nat. Comput. Sci.
Mustafa Guler, Benjamin Krummenacher, Thomas Hall, Meghana Tandon, Joshua Abrams, Sanjana Ravi, Peng Chen, Matthew Lauber, Bahar Behsaz, Hosein Mohimani
2024 J jnl
SPRINT Enables Interpretable and Ultra-Fast Virtual Screening against Thousands of Proteomes.
CoRR
Andrew T. McNutt, Abhinav Adduri, Caleb N. Ellington, Monica T. Dayao, Eric P. Xing, Hosein Mohimani, David Ryan Koes
2023 J jnl
AdenPredictor: accurate prediction of the adenylation domain specificity of nonribosomal peptide biosynthetic gene clusters in microbial genomes.
Bioinform.
Mihir Mongia, Romel Baral, Abhinav Adduri, Donghui Yan, Yudong Liu, Yuying Bian, Paul Kim, Bahar Behsaz, Hosein Mohimani
2021 J jnl
ForestDSH: a universal hash design for discrete probability distributions.
Data Min. Knowl. Discov.
Arash Gholami Davoodi, Sean Chang, Hyun Gon Yoo, Anubhav Baweja, Mihir Mongia, Hosein Mohimani
2021 J jnl
MS2Planner: improved fragmentation spectra coverage in untargeted mass spectrometry by iterative optimized data acquisition.
Bioinform.
Zeyuan Zuo, Liu Cao, Louis-Félix Nothias, Hosein Mohimani
2020 — conf
Efficient Database Search via Tensor Distribution Bucketing.
PAKDD (2)
Mihir Mongia, Benjamin Soudry, Arash Gholami Davoodi, Hosein Mohimani
2020 A conf
Measuring Mutual Information Between All Pairs of Variables in Subquadratic Complexity.
AISTATS
Mohsen Ferdosi, Arash Gholami Davoodi, Hosein Mohimani
2019 B conf
De Novo Peptide Sequencing Reveals a Vast Cyclopeptidome in Human Gut and Other Environments.
RECOMB
Bahar Behsaz, Hosein Mohimani, Alexey A. Gurevich, Andrey D. Prjibelski, Mark F. Fisher, Larry Smarr, Pieter C. Dorrestein, Joshua S. Mylne, Pavel A. Pevzner
2019 J jnl
Tree-wise Distribution Sensitive hashing: Efficient Maximum likelihood Classification by joint dimensionality reduction in known probabilistic settings.
CoRR
Arash Gholami Davoodi, Anubhav Baweja, Hosein Mohimani
2012 C conf
MS-DPR: An Algorithm for Computing Statistical Significance of Spectral Identifications of Non-linear Peptides.
WABI
Hosein Mohimani, Sangtae Kim, Pavel A. Pevzner
2011 B conf
Multiplex De Novo Sequencing of Peptide Antibiotics.
RECOMB
Hosein Mohimani, Wei-Ting Liu, Yu-Liang Yang, Susana P. Gaudêncio, William Fenical, Pieter C. Dorrestein, Pavel A. Pevzner
2011 J jnl
Multiplex De Novo Sequencing of Peptide Antibiotics.
J. Comput. Biol.
Hosein Mohimani, Wei-Ting Liu, Yu-Liang Yang, Susana P. Gaudêncio, William Fenical, Pieter C. Dorrestein, Pavel A. Pevzner
2010 B conf
Exact calculation of pattern probabilities.
ISIT
Jayadev Acharya, Hirakendu Das, Hosein Mohimani, Alon Orlitsky, Shengjun Pan