Hongzhe Guo

13 papers Journal 11Unranked 2
YearRankTypeTitle / Venue / Authors
2024 J jnl
SCancerRNA: Expression at the Single-cell Level and Interaction Resource of Non-coding RNA Biomarkers for Cancers.
Genom. Proteom. Bioinform.
Hongzhe Guo, Liyuan Zhang, Xinran Cui, Liang Cheng, Tianyi Zhao, Yadong Wang
2024 J jnl
miniSNV: accurate and fast single nucleotide variant calling from nanopore sequencing data.
Briefings Bioinform.
Miao Cui, Yadong Liu, Xian Yu, Hongzhe Guo, Tao Jiang, Yadong Wang, Bo Liu
2023 — conf
Comprehensive evaluation of RNA-seq alignment methods based on long-read sequencing data.
BIBM
Yadong Liu, Hongzhe Guo, Zhenhao Lu, Yadong Wang, Zhongyu Liu, Tao Jiang
2023 J jnl
Identifying cancer driver genes using a two-stage random walk with restart on a gene interaction network.
Comput. Biol. Medicine
Ping Meng, Guohua Wang, Hongzhe Guo, Tao Jiang
2023 J jnl
MLSpatial: A machine-learning method to reconstruct the spatial distribution of cells from scRNA-seq by extracting spatial features.
Comput. Biol. Medicine
Mengbo Zhu, Changjun Li, Kebo Lv, Hongzhe Guo, Rui Hou, Geng Tian, Jialiang Yang
2023 J jnl
Reply: Correspondence on NanoVar's performance outlined by Jiang T. et al. in 'Long-read sequencing settings for efficient structural variation detection based on comprehensive evaluation'.
BMC Bioinform.
Tao Jiang, Shiqi Liu, Hongzhe Guo
2022 J jnl
Evaluation of classification in single cell atac-seq data with machine learning methods.
BMC Bioinform.
Hongzhe Guo, Zhongbo Yang, Tao Jiang, Shiqi Liu, Yadong Wang, Zhe Cui
2022 J jnl
New quantum codes derived from images of cyclic codes.
Quantum Inf. Process.
Shixin Zhu, Hongzhe Guo, Xiaoshan Kai, Zhonghua Sun
2021 J jnl
Long-read sequencing settings for efficient structural variation detection based on comprehensive evaluation.
BMC Bioinform.
Tao Jiang, Shiqi Liu, Shuqi Cao, Yadong Liu, Zhe Cui, Yadong Wang, Hongzhe Guo
2021 J jnl
deGSM: Memory Scalable Construction Of Large Scale de Bruijn Graph.
IEEE ACM Trans. Comput. Biol. Bioinform.
Hongzhe Guo, Yilei Fu, Yan Gao, Junyi Li, Yadong Wang, Bo Liu
2019 J jnl
Fast read alignment with incorporation of known genomic variants.
BMC Medical Informatics Decis. Mak.
Hongzhe Guo, Bo Liu, Dengfeng Guan, Yilei Fu, Yadong Wang
2018 — conf
Fast variation-aware read alignment with deBGA-VARA.
BIBM
Hongzhe Guo, Bo Liu, Dengfeng Guan, Yilei Fu, Yadong Wang
2016 J jnl
deBGA: read alignment with de Bruijn graph-based seed and extension.
Bioinform.
Bo Liu, Hongzhe Guo, Michael Brudno, Yadong Wang