Homayoun Valafar

80 papers B 3C 2Misc 3Journal 50Unranked 18

Year	Rank	Type	Title / Venue / Authors
2025	J	`jnl`	Automated Vigilance State Classification in Rodents Using Machine Learning and Feature Engineering. CoRR Sankalp Jajee, Gaurav Kumar, Homayoun Valafar
2025	C	`conf`	Rep Smarter, Not Harder: AI Hypertrophy Coaching with Wearable Sensors and Edge Neural Networks. ICMLA Grant King, Musa Azeem, Savannah Noblitt, Ramtin Zand, Homayoun Valafar
2025	J	`jnl`	Rep Smarter, Not Harder: AI Hypertrophy Coaching with Wearable Sensors and Edge Neural Networks. CoRR Grant King, Musa Azeem, Savannah Noblitt, Ramtin Zand, Homayoun Valafar
2024	J	`jnl`	DataDock: An Open Source Data Hub for Research. CoRR Lexington Allen Whalen, Homayoun Valafar
2024	J	`jnl`	Dihedral Angle Adherence: Evaluating Protein Structure Predictions in the Absence of Experimental Data. CoRR Musa Azeem, Homayoun Valafar
2024	J	`jnl`	Toward Concurrent Identification of Human Activities with a Single Unifying Neural Network Classification: First Step. Sensors Andrew Smith, Musa Azeem, Chrisogonas O. Odhiambo, Pamela J. Wright, Hanim E. Diktas, Spencer Upton, Corby K. Martin, Brett Froeliger, Cynthia F. Corbett, Homayoun Valafar
2023	J	`jnl`	Automated Measurement of Vascular Calcification in Femoral Endarterectomy Patients Using Deep Learning. CoRR Alireza Bagheri Rajeoni, Breanna Pederson, Daniel G. Clair, Susan M. Lessner, Homayoun Valafar
2023	J	`jnl`	Comprehensive and user-analytics-friendly cancer patient database for physicians and researchers. CoRR Ali Firooz, Avery T. Funkhouser, Julie C. Martin, W. Jeffery Edenfield, Homayoun Valafar, Anna V. Blenda
2023	J	`jnl`	On Creating a Comprehensive Food Database. CoRR Lexington Allen Whalen, Brie Turner-McGrievy, Matthew McGrievy, Andrew Hester, Homayoun Valafar
2023	J	`jnl`	TransONet: Automatic Segmentation of Vasculature in Computed Tomographic Angiograms Using Deep Learning. CoRR Alireza Bagheri Rajeoni, Breanna Pederson, Ali Firooz, Hamed Abdollahi, Andrew K. Smith, Daniel G. Clair, Susan M. Lessner, Homayoun Valafar
2023	J	`jnl`	Wordification: A New Way of Teaching English Spelling Patterns. CoRR Lexington Allen Whalen, Nathan Bickel, Shash Comandur, Dalton Craven, Stanley Dubinsky, Homayoun Valafar
2023	J	`jnl`	nD-PDPA: nDimensional Probability Density Profile Analysis. CoRR Arjang Fahim, Stephanie Jimenez Irausquin, Homayoun Valafar
2022	J	`jnl`	Application of Dimensional Reduction in Artificial Neural Networks to Improve Emergency Department Triage During Chemical Mass Casualty Incidents. CoRR Nicholas D. Boltin, Joan Marie Culley, Homayoun Valafar
2022	—	`conf`	Application of machine learning for patient response prediction to cardiac resynchronization therapy. BCB Brendan E. Odigwe, Alireza Bagheri Rajeoni, Celestine I. Odigwe, Francis G. Spinale, Homayoun Valafar
2022	—	`conf`	Comprehensive and User-Analytics-Friendly Cancer Patient Database for Physicians and Researchers. CSCI Ali Firooz, Avery T. Funkhouser, Julie C. Martin, W. Jeffery Edenfield, Homayoun Valafar, Anna V. Blenda
2022	J	`jnl`	Human Activity Recognition on Time Series Accelerometer Sensor Data using LSTM Recurrent Neural Networks. CoRR Chrisogonas O. Odhiambo, Sanjoy Saha, Corby K. Martin, Homayoun Valafar
2022	—	`conf`	On Creating a Comprehensive Food Database. CSCI Lexington Allen Whalen, Brie Turner-McGrievy, Matthew McGrievy, Andrew Hester, Homayoun Valafar
2021	J	`jnl`	Application of Machine Learning in Early Recommendation of Cardiac Resynchronization Therapy. CoRR Brendan E. Odigwe, Francis G. Spinale, Homayoun Valafar
2021	—	`conf`	Application of Machine Learning to Sleep Stage Classification. CSCI Andrew Smith, Hardik Anand, Snezana Milosavljevic, Katherine M. Rentschler, Ana Pocivavsek, Homayoun Valafar
2021	J	`jnl`	Application of Machine Learning to Sleep Stage Classification. CoRR Andrew Smith, Hardik Anand, Snezana Milosavljevic, Katherine M. Rentschler, Ana Pocivavsek, Homayoun Valafar
2021	—	`conf`	Computational modeling of SARS-CoV-2 Nsp1 binding to human ribosomal 40S complex. BCB Linkel Boateng, Anita Nag, Homayoun Valafar
2021	J	`jnl`	MedSensor: Medication Adherence Monitoring Using Neural Networks on Smartwatch Accelerometer Sensor Data. CoRR Chrisogonas O. Odhiambo, Pamela J. Wright, Cindy Corbett, Homayoun Valafar
2021	J	`jnl`	REDCRAFT: A computational platform using residual dipolar coupling NMR data for determining structures of perdeuterated proteins in solution. PLoS Comput. Biol. Casey A. Cole, Nourhan S. Daigham, Gaohua Liu, Gaetano T. Montelione, Homayoun Valafar
2021	J	`jnl`	Structure Calculation and Reconstruction of Discrete State Dynamics from Residual Dipolar Couplings using REDCRAFT. CoRR Casey A. Cole, Rishi Mukhopadhyay, Hanin Omar, Mirko Hennig, Homayoun Valafar
2020	J	`jnl`	A Comparative study of Artificial Neural Networks Using Reinforcement learning and Multidimensional Bayesian Classification Using Parzen Density Estimation for Identification of GC-EIMS Spectra of Partially Methylated Alditol Acetates. CoRR Faramarz Valafar, Homayoun Valafar
2020	—	`conf`	A Preliminary Investigation in the Molecular Basis of Host Shutoff Mechanism in SARS-CoV. BCB Niharika Pandala, Casey A. Cole, Devaun McFarland, Anita Nag, Homayoun Valafar
2020	J	`jnl`	A Preliminary Investigation in the Molecular Basis of Host Shutoff Mechanism in SARS-CoV. CoRR Niharika Pandala, Casey A. Cole, Devaun McFarland, Anita Nag, Homayoun Valafar
2020	J	`jnl`	An AI model for Rapid and Accurate Identification of Chemical Agents in Mass Casualty Incidents. CoRR Nicholas D. Boltin, Daniel Vu, Bethany Janos, Alyssa Shofner, Joan Marie Culley, Homayoun Valafar
2020	J	`jnl`	An Investigation in Optimal Encoding of Protein Primary Sequence for Structure Prediction by Artificial Neural Networks. CoRR Aaron Hein, Casey A. Cole, Homayoun Valafar
2020	J	`jnl`	Assessing the Precision and Recall of msTALI as Applied to an Active-Site Study on Fold Families. CoRR Devaun McFarland, Homayoun Valafar
2020	J	`jnl`	Distributed Global Optimization (DGO). CoRR Homayoun Valafar, Okan K. Ersoy, Faramarz Valafar
2020	J	`jnl`	Identification of 1H-NMR Spectra of Xyloglucan Oligosaccharides: A Comparative Study of Artificial Neural Networks and Bayesian Classification Using Nonparametric Density Estimation. CoRR Faramarz Valafar, Homayoun Valafar, William S. York
2020	J	`jnl`	Increased usability, algorithmic improvements and incorporation of data mining for structure calculation of proteins with REDCRAFT software package. BMC Bioinform. Casey A. Cole, Caleb Parks, Julian Rachele, Homayoun Valafar
2020	J	`jnl`	Parallel Implementation of Distributed Global Optimization (DGO). CoRR Homayoun Valafar, Okan K. Ersoy, Faramarz Valafar
2020	J	`jnl`	Parallel, Self Organizing, Consensus Neural Networks. CoRR Homayoun Valafar, Faramarz Valafar, Okan K. Ersoy
2020	J	`jnl`	Process of Efficiently Parallelizing a Protein Structure Determination Algorithm. CoRR Michael Bryson, Xijiang Miao, Homayoun Valafar
2020	J	`jnl`	Recognition of Smoking Gesture Using Smart Watch Technology. CoRR Casey A. Cole, Bethany Janos, Dien Anshari, James F. Thrasher, Scott M. Strayer, Homayoun Valafar
2020	J	`jnl`	Reduction in the complexity of 1D 1H-NMR spectra by the use of Frequency to Information Transformation. CoRR Homayoun Valafar, Faramarz Valafar
2020	J	`jnl`	State Transition Modeling of the Smoking Behavior using LSTM Recurrent Neural Networks. CoRR Chrisogonas O. Odhiambo, Casey A. Cole, Alaleh Torkjazi, Homayoun Valafar
2020	J	`jnl`	TALI: Protein Structure Alignment Using Backbone Torsion Angles. CoRR Xijiang Miao, Michael G. Bryson, Homayoun Valafar
2019	J	`jnl`	Automated Analysis of Femoral Artery Calcification Using Machine Learning Techniques. CoRR Liang Zhao, Brendan E. Odigwe, Susan M. Lessner, Daniel G. Clair, Firas Mussa, Homayoun Valafar
2019	J	`jnl`	Automated Assignment of Backbone Resonances Using Residual Dipolar Couplings Acquired from a Protein with Known Structure. CoRR Paul Shealy, Rishi Mukhopadhyay, Stephen Smith, Homayoun Valafar
2019	J	`jnl`	Designing and executing a functional exercise to test a novel informatics tool for mass casualty triage. J. Am. Medical Informatics Assoc. Sara Belle Donevant, Erik Svendsen, Jane V. Richter, Abbas Tavakoli, Jean Craig, Nicholas D. Boltin, Homayoun Valafar, Salvatore DiNardi, Joan Marie Culley
2019	—	`conf`	Evaluating Precisicon and Recall through the Utility of msTALI via an Active Site Study on Fold Families. BIBM Devaun McFarland, Caroline Bullock, Homayoun Valafar
2019	J	`jnl`	Improvements of the REDCRAFT Software Package. CoRR Casey A. Cole, Caleb Parks, Julian Rachele, Homayoun Valafar
2019	J	`jnl`	Modelling of Sickle Cell Anemia Patients Response to Hydroxyurea using Artificial Neural Networks. CoRR Brendan E. Odigwe, Jesuloluwa S. Eyitayo, Celestine I. Odigwe, Homayoun Valafar
2019	J	`jnl`	PDBMine: A Reformulation of the Protein Data Bank to Facilitate Structural Data Mining. CoRR Casey A. Cole, Christopher Ott, Diego Valdes, Homayoun Valafar
2019	J	`jnl`	Protein Fold Family Recognition From Unassigned Residual Dipolar Coupling Data. CoRR Rishi Mukhopadhyay, Paul Shealy, Homayoun Valafar
2019	J	`jnl`	Using Residual Dipolar Couplings from Two Alignment Media to Detect Structural Homology. CoRR Ryan Yandle, Rishi Mukhopadhyay, Homayoun Valafar
2018	C	`conf`	Application of ensemble learning to the differential gene expression in left-right breast tumors. CIBCB Casey A. Cole, Kenneth L. Nesbitt, Homayoun Valafar
2017	—	`conf`	Resolving ambiguities in accelerometer data due to location of sensor on wrist in application to detection of smoking gesture. BHI Casey A. Cole, James F. Thrasher, Scott M. Strayer, Homayoun Valafar
2016	J	`jnl`	Social networks for improving healthy weight loss behaviors for overweight and obese adults: A randomized clinical trial of the social pounds off digitally (Social POD) mobile app. Int. J. Medical Informatics Sarah Hales, Gabrielle M. Turner-McGrievy, Sara Wilcox, Arjang Fahim, Rachel E. Davis, Michael N. Huhns, Homayoun Valafar
2014	J	`jnl`	Dynafold: a Dynamic Programming Approach to protein Backbone Structure determination from Minimal Sets of residual Dipolar couplings. J. Bioinform. Comput. Biol. Rishi Mukhopadhyay, Stephanie Jimenez Irausquin, Chris Schmidt, Homayoun Valafar
2013	J	`jnl`	Advances in the REDCAT software package. BMC Bioinform. Chris Schmidt, Stephanie Jimenez Irausquin, Homayoun Valafar
2012	J	`jnl`	Multiple structure alignment with msTALI. BMC Bioinform. Paul Shealy, Homayoun Valafar
2011	—	`conf`	An Artificial Neural Network Based Approach for Identification of Native Protein Structures Using an Extended Forcefield. BIBM Timothy Matthew Fawcett, Stephanie Jimenez Irausquin, Mikhail Simin, Homayoun Valafar
2009	—	`conf`	An Investigation in Aligning Multiple Protein Structures Using Biochemical and Biophysical Properties. BIOCOMP Paul Shealy, Homayoun Valafar
2009	—	`conf`	Using Residual Dipolar Couplings from Two Alignment Media to Detect Structural Homology. BIOCOMP Ryan Yandle, Rishi Mukhopadhyay, Homayoun Valafar
2008	—	`conf`	Automated Assignment of Backbone Resonances Using Residual Dipolar Couplings Acquired from a Protein with Known Structure. BIOCOMP Paul Shealy, Rishi Mukhopadhyay, Stephen Smith, Homayoun Valafar
2008	—	`conf`	Minimum Data Requirements and Supplemental Angle Constraints for Protein Structure Prediction with REDCRAFT. BIOCOMP Elizabeth Timko, Paul Shealy, Michael Bryson, Homayoun Valafar
2008	—	`conf`	Protein Fold Family Recognition From Unassigned Residual Dipolar Coupling Data. BIOCOMP Rishi Mukhopadhyay, Paul Shealy, Homayoun Valafar
2008	J	`jnl`	Tali: Local Alignment of protein Structures Using Backbone Torsion Angles. J. Bioinform. Comput. Biol. Xijiang Miao, Peter J. Waddell, Homayoun Valafar
2006	—	`ed.`	Proceedings of the 2006 International Conference on Bioinformatics & Computational Biology, BIOCOMP'06, Las Vegas, Nevada, USA, June 26-29, 2006 BIOCOMP Hamid R. Arabnia, Homayoun Valafar
2006	Misc	`conf`	Process of Efficiently Parallelizing a Protein Structure Determination Algorithm. PDPTA Michael Bryson, Xijiang Miao, Homayoun Valafar
2006	—	`conf`	TALI: Protein Structure Alignment Using Backbone Torsion Angles. BIOCOMP Xijiang Miao, Michael Bryson, Homayoun Valafar
2005	—	`ed.`	Proceedings of The 2005 International Conference on Mathematics and Engineering Techniques in Medicine and Biological Sciences, METMBS 2005, Las Vegas, Nevada, USA, June 20-23, 2005 METMBS Faramarz Valafar, Homayoun Valafar
2004	J	`jnl`	Distributed Global Optimization and its Development on the MultiRing Network. Neural Parallel Sci. Comput. Homayoun Valafar, Hamid R. Arabnia, Gita C. Williams
2004	—	`ed.`	Proceedings of the International Conference on Mathematics and Engineering Techniques in Medicine and Biological Scienes, METMBS '04, June 21-24, 2004, Las Vegas, Nevada, USA METMBS Faramarz Valafar, Homayoun Valafar
2004	—	`conf`	Residual Dipolar Couplings in High Throughput Backbone Solution Structure Determination of Proteins. METMBS Homayoun Valafar, Kristen L. Mayer, Peter D. LeBlond, Catherine Bougault, James H. Prestegard
2003	—	`ed.`	Proceedings of the International Conference on Mathematics and Engineering Techniques in Medicine and Biological Scienes, METMBS '03, June 23 - 26, 2003, Las Vegas, Nevada, USA METMBS Faramarz Valafar, Homayoun Valafar
2003	J	`jnl`	Rapid classification of a protein fold family using a statistical analysis of dipolar couplings. Bioinform. Homayoun Valafar, James H. Prestegard
2002	J	`jnl`	Data mining and knowledge discovery in proton nuclear magnetic resonance ( Knowl. Based Syst. Homayoun Valafar, Faramarz Valafar
2000	J	`jnl`	Predicting the effectiveness of hydroxyurea in individual sickle cell anemia patients. Artif. Intell. Medicine Homayoun Valafar, Faramarz Valafar, Alan Darvill, Peter Albersheim, Abdullah Kutlar, Kristy F. Woods, John Hardin
1999	Misc	`conf`	A Comparative Study of Artificial Neural Networks Using Reinforcement Learning and Multidimensional Bayesian Classification Using Parzen Density Estimation for Identification of GC-EIMS Spectra of Partially Methylated Alditol Acetates on the World Wide Web. IC-AI Faramarz Valafar, Homayoun Valafar
1999	B	`conf`	A comparative study of linear and quadratic discriminant classifier techniques for variable selection: a case study in predicting the effectiveness of hydroxyurea treatment of sickle cell anemia. IJCNN Saeid Roushanzamir, Homayoun Valafar, Faramarz Valafar
1999	Misc	`conf`	Identification of H-NMR Spectra of Xyloglucan Oligosaccharides: A Comparative Study of Artificial Neural Networks and Bayesian Classification Using Nonparametric Density Estimation. IC-AI Faramarz Valafar, Homayoun Valafar, William S. York
1999	B	`conf`	Parallel, self organizing, consensus neural networks. IJCNN Homayoun Valafar, Faramarz Valafar, Okan K. Ersoy
1999	B	`conf`	Prediction of a patient's response to a specific drug treatment using artificial neural networks. IJCNN Homayoun Valafar, Faramarz Valafar
1996	—	`conf`	Distributed global optimization (DGO). ICNN Homayoun Valafar, Okan K. Ersoy, Faramarz Valafar
1995	—	`conf`	Comparative studies of two neural network architectures for modeling of human speech production. ICNN Faramarz Valafar, Homayoun Valafar, Okan K. Ersoy, Richard G. Schwartz