Herman van Vlijmen

13 papers Journal 13
YearRankTypeTitle / Venue / Authors
2025 J jnl
Combining Bayesian and Evidential Uncertainty Quantification for Improved Bioactivity Modeling.
J. Chem. Inf. Model.
Bola Khalil, Kajetan Schweighofer, Natalia Dyubankova, Gerard J. P. van Westen, Herman van Vlijmen
2022 J jnl
The Impact of Experimental and Calculated Error on the Performance of Affinity Predictions.
J. Chem. Inf. Model.
Gary Tresadern, Kanaka Tatikola, Javier Cabrera, Lingle Wang, Robert Abel, Herman van Vlijmen, Helena Geys
2020 J jnl
Assessment of the Fragment Docking Program SEED.
J. Chem. Inf. Model.
Kenneth Goossens, Berthold Wroblowski, Cassiano Langini, Herman van Vlijmen, Amedeo Caflisch, Hans De Winter
2020 J jnl
The Need of Industry to Go FAIR.
Data Intell.
Herman van Vlijmen, Albert Mons, Arne Waalkens, Wouter Franke, Arie Baak, Gerbrand Ruiter, Christine R. Kirkpatrick, Luiz Olavo Bonino da Silva Santos, Bert Meerman, Renger Jellema, Derk L. Arts, Martijn G. Kersloot, Sebastiaan L. Knijnenburg, Scott J. Lusher, Rudi Verbeeck, Jean-Marc Neefs
2019 J jnl
Limitations of Ligand-Only Approaches for Predicting the Reactivity of Covalent Inhibitors.
J. Chem. Inf. Model.
Angus Voice, Gary Tresadern, Herman van Vlijmen, Adrian J. Mulholland
2018 J jnl
Large-Scale Validation of Mixed-Solvent Simulations to Assess Hotspots at Protein-Protein Interaction Interfaces.
J. Chem. Inf. Model.
Phani Ghanakota, Herman van Vlijmen, Woody Sherman, Thijs Beuming
2017 J jnl
Computational chemistry at Janssen.
J. Comput. Aided Mol. Des.
Herman van Vlijmen, Renee L. DesJarlais, Tara Mirzadegan
2016 J jnl
Collaborating to improve the use of free-energy and other quantitative methods in drug discovery.
J. Comput. Aided Mol. Des.
Bradley Sherborne, Veerabahu Shanmugasundaram, Alan C. Cheng, Clara D. Christ, Renee L. DesJarlais, José S. Duca, Richard A. Lewis, Deborah A. Loughney, Eric S. Manas, Georgia B. McGaughey, Catherine E. Peishoff, Herman van Vlijmen
2015 J jnl
QQ-SNV: single nucleotide variant detection at low frequency by comparing the quality quantiles.
BMC Bioinform.
Koen Van der Borght, Kim Thys, Yves Wetzels, Lieven Clement, Bie M. P. Verbist, Joke Reumers, Herman van Vlijmen, Jeroen Aerssens
2014 J jnl
Multi-model inference using mixed effects from a linear regression based genetic algorithm.
BMC Bioinform.
Koen Van der Borght, Geert Verbeke, Herman van Vlijmen
2012 J jnl
Cheminformatics.
Commun. ACM
Jörg K. Wegner, Aaron D. Sterling, Rajarshi Guha, Andreas Bender, Jean-Loup Faulon, Janna Hastings, Noel M. O'Boyle, John P. Overington, Herman van Vlijmen, Egon L. Willighagen
2011 J jnl
Cross-validated stepwise regression for identification of novel non-nucleoside reverse transcriptase inhibitor resistance associated mutations.
BMC Bioinform.
Koen Van der Borght, Elke Van Craenenbroeck, Pierre Lecocq, Margriet Van Houtte, Barbara Van Kerckhove, Lee Bacheler, Geert Verbeke, Herman van Vlijmen
2002 J jnl
3D QSAR (COMFA) of a series of potent and highly selective VLA-4 antagonists.
J. Comput. Aided Mol. Des.
Juswinder Singh, Herman van Vlijmen, Wen-Cherng Lee, Yusheng Liao, Ko-Chung Lin, Humayun Ateeq, Julio Cuervo, Craig Zimmerman, Charles Hammond, Michael Karpusas, Rex Palmer, Tapan Chattopadhyay, Steven P. Adams