Hercules Dalianis

92 papers A 3B 11C 2Misc 8Journal 19Unranked 45

Year	Rank	Type	Title / Venue / Authors
2025	—	`conf`	Data-Constrained Synthesis of Training Data for De-Identification. ACL (1) Thomas Vakili, Aron Henriksson, Hercules Dalianis
2025	J	`jnl`	Data-Constrained Synthesis of Training Data for De-Identification. CoRR Thomas Vakili, Aron Henriksson, Hercules Dalianis
2025	—	`conf`	Implementing a Nordic-Baltic Federated Health Data Network: A Case Report. MedInfo Taridzo Chomutare, Aleksandar Babic, Laura-Maria Peltonen, Silja Elunurm, Peter Lundberg, Arne Jönsson, Emma Eneling, Ciprian-Virgil Gerstenberger, Troels Siggaard, Raivo Kolde, Oskar Jerdhaf, Martin Hansson, Alexandra Makhlysheva, Miroslav Muzny, Erik Ylipää, Søren Brunak, Hercules Dalianis
2025	Misc	`conf`	Instruction-Tuning LLaMA for Synthetic Medical Note Generation in Swedish and English. RANLP Lotta Kiefer, Jesujoba Alabi, Thomas Vakili, Hercules Dalianis, Dietrich Klakow
2025	J	`jnl`	Natural Language Processing for Electronic Health Records in Scandinavian Languages: Norwegian, Swedish, and Danish. CoRR Ashenafi Zebene Woldaregay, Jørgen Aarmo Lund, Phuong Dinh Ngo, Mariyam Tayefi, Per Joel Burman, Stine Hansen, Martin Hylleholt Sillesen, Hercules Dalianis, Robert Jenssen, Lindsetmo Rolf Ole, Karl Øyvind Mikalsen
2024	J	`jnl`	Artificial intelligence to improve clinical coding practice in Scandinavia: a crossover randomized controlled trial. CoRR Taridzo Chomutare, Therese Olsen Svenning, Miguel Angel Tejedor Hernandez, Phuong Dinh Ngo, Andrius Budrionis, Kaisa Markljung, Lill Irene Hind, Torbjørn Torsvik, Karl Øyvind Mikalsen, Aleksandar Babic, Hercules Dalianis
2024	J	`jnl`	Implementing a Nordic-Baltic Federated Health Data Network: a case report. CoRR Taridzo Chomutare, Aleksandar Babic, Laura-Maria Peltonen, Silja Elunurm, Peter Lundberg, Arne Jönsson, Emma Eneling, Ciprian-Virgil Gerstenberger, Troels Siggaard, Raivo Kolde, Oskar Jerdhaf, Martin Hansson, Alexandra Makhlysheva, Miroslav Muzny, Erik Ylipää, Søren Brunak, Hercules Dalianis
2023	—	`conf`	Using Membership Inference Attacks to Evaluate Privacy-Preserving Language Modeling Fails for Pseudonymizing Data. NoDaLiDa Thomas Vakili, Hercules Dalianis
2022	—	`conf`	Combining deep learning and fuzzy logic to predict rare ICD-10 codes from clinical notes. ICDH Taridzo Chomutare, Andrius Budrionis, Hercules Dalianis
2022	B	`conf`	Downstream Task Performance of BERT Models Pre-Trained Using Automatically De-Identified Clinical Data. LREC Thomas Vakili, Anastasios Lamproudis, Aron Henriksson, Hercules Dalianis
2022	B	`conf`	Evaluating Pretraining Strategies for Clinical BERT Models. LREC Anastasios Lamproudis, Aron Henriksson, Hercules Dalianis
2022	J	`jnl`	Implementation of specialised attention mechanisms: ICD-10 classification of Gastrointestinal discharge summaries in English, Spanish and Swedish. J. Biomed. Informatics Alberto Blanco, Sonja Remmer, Alicia Pérez, Hercules Dalianis, Arantza Casillas
2022	—	`conf`	Utility Preservation of Clinical Text After De-Identification. BioNLP@ACL Thomas Vakili, Hercules Dalianis
2022	—	`conf`	Vocabulary Modifications for Domain-adaptive Pretraining of Clinical Language Models. HEALTHINF Anastasios Lamproudis, Aron Henriksson, Hercules Dalianis
2021	—	`conf`	Applying and Sharing pre-trained BERT-models for Named Entity Recognition and Classification in Swedish Electronic Patient Records. NoDaLiDa Mila Grancharova, Hercules Dalianis
2021	—	`conf`	Are Clinical BERT Models Privacy Preserving? The Difficulty of Extracting Patient-Condition Associations. HUMAN@AAAI Fall Symposium Thomas Vakili, Hercules Dalianis
2021	—	`conf`	Creating and Evaluating a Synthetic Norwegian Clinical Corpus for De-Identification. NoDaLiDa Synnøve Bråthen, Wilhelm Wie, Hercules Dalianis
2021	—	`conf`	De-identification of Clinical Text for Secondary Use: Research Issues. HEALTHINF Hanna Berg, Aron Henriksson, Uno Fors, Hercules Dalianis
2021	Misc	`conf`	Developing a Clinical Language Model for Swedish: Continued Pretraining of Generic BERT with In-Domain Data. RANLP Anastasios Lamproudis, Aron Henriksson, Hercules Dalianis
2021	—	`conf`	HB Deid - HB De-identification tool demonstrator. NoDaLiDa Hanna Berg, Hercules Dalianis
2021	Misc	`conf`	Multi-label Diagnosis Classification of Swedish Discharge Summaries - ICD-10 Code Assignment Using KB-BERT. RANLP Sonja Remmer, Anastasios Lamproudis, Hercules Dalianis
2021	Misc	`conf`	On the Contribution of Per-ICD Attention Mechanisms to Classify Health Records in Languages with Fewer Resources than English. RANLP Alberto Blanco, Sonja Remmer, Alicia Pérez, Hercules Dalianis, Arantza Casillas
2021	—	`conf`	Terminology Expansion with Prototype Embeddings: Extracting Symptoms of Urinary Tract Infection from Clinical Text. HEALTHINF Mahbub Ul Alam, Aron Henriksson, Hideyuki Tanushi, Emil Thiman, Pontus Nauclér, Hercules Dalianis
2020	B	`conf`	A Semi-supervised Approach for De-identification of Swedish Clinical Text. LREC Hanna Berg, Hercules Dalianis
2020	—	`conf`	De-Identifying Swedish EHR Text Using Public Resources in the General Domain. MIE Taridzo Chomutare, Kassaye Yitbarek Yigzaw, Andrius Budrionis, Alexandra Makhlysheva, Fred Godtliebsen, Hercules Dalianis
2020	—	`conf`	Deep Learning from Heterogeneous Sequences of Sparse Medical Data for Early Prediction of Sepsis. HEALTHINF Mahbub Ul Alam, Aron Henriksson, John Karlsson Valik, Logan Morgan Ward, Pontus Nauclér, Hercules Dalianis
2020	—	`conf`	Detecting Adverse Drug Events from Swedish Electronic Health Records using Text Mining. MultiligualBIO@LREC Maria Bampa, Hercules Dalianis
2020	—	`conf`	The Impact of De-identification on Downstream Named Entity Recognition in Clinical Text. LOUHI@EMNLP Hanna Berg, Aron Henriksson, Hercules Dalianis
2019	—	`conf`	Building a De-identification System for Real Swedish Clinical Text Using Pseudonymised Clinical Text. LOUHI@EMNLP Hanna Berg, Taridzo Chomutare, Hercules Dalianis
2019	J	`jnl`	Knowledge patterns for online health portal development. Health Informatics J. Andrea Andrenucci, Hercules Dalianis, Sumithra Velupillai
2018	J	`jnl`	Clinical Natural Language Processing in languages other than English: opportunities and challenges. J. Biomed. Semant. Aurélie Névéol, Hercules Dalianis, Sumithra Velupillai, Guergana Savova, Pierre Zweigenbaum
2018	—	`book`	Clinical Text Mining - Secondary Use of Electronic Patient Records Hercules Dalianis
2018	J	`jnl`	Detecting hospital-acquired infections: A document classification approach using support vector machines and gradient tree boosting. Health Informatics J. Claudia Ehrentraut, Markus Ekholm, Hideyuki Tanushi, Jörg Tiedemann, Hercules Dalianis
2018	J	`jnl`	Ensembles for clinical entity extraction. Proces. del Leng. Natural Rebecka Weegar, Alicia Pérez, Hercules Dalianis, Koldo Gojenola, Arantza Casillas, Maite Oronoz
2017	—	`conf`	Detecting Protected Health Information in Heterogeneous Clinical Notes. MedInfo Aron Henriksson, Maria Kvist, Hercules Dalianis
2017	Misc	`conf`	Efficient Encoding of Pathology Reports Using Natural Language Processing. RANLP Rebecka Weegar, Jan F. Nygård, Hercules Dalianis
2017	J	`jnl`	Semi-supervised medical entity recognition: A study on Spanish and Swedish clinical corpora. J. Biomed. Informatics Alicia Pérez, Rebecka Weegar, Arantza Casillas, Koldo Gojenola, Maite Oronoz, Hercules Dalianis
2016	—	`conf`	Applying deep learning on electronic health records in Swedish to predict healthcare-associated infections. BioNLP@ACL Olof Jacobson, Hercules Dalianis
2016	—	`conf`	Development and Enhancement of a Stemmer for the Greek Language. PCI Georgios Ntais, Spyridon Saroukos, Eleni Berki, Hercules Dalianis
2016	J	`jnl`	Ensembles of randomized trees using diverse distributed representations of clinical events. BMC Medical Informatics Decis. Mak. Aron Henriksson, Jing Zhao, Hercules Dalianis, Henrik Boström
2016	—	`conf`	Pathology text mining - on Norwegian prostate cancer reports. ICDE Workshops Anders Dahl, Atilla Ozkan, Hercules Dalianis
2015	—	`conf`	Adverse Drug Event classification of health records using dictionary based pre-processing and machine learning. Louhi@EMNLP Stefanie Friedrich, Hercules Dalianis
2015	—	`conf`	Creating a rule based system for text mining of Norwegian breast cancer pathology reports. Louhi@EMNLP Rebecka Weegar, Hercules Dalianis
2015	—	`conf`	Exploration of Known and Unknown Early Symptoms of Cervical Cancer and Development of a Symptom Spectrum - Outline of a Data and Text Mining Based Approach. CAiSE Industry Track Claudia Ehrentratraut, Hercules Dalianis, Karin Sundström
2015	Misc	`conf`	Finding Cervical Cancer Symptoms in Swedish Clinical Text using a Machine Learning Approach and NegEx. AMIA Rebecka Weegar, Maria Kvist, Karin Sundström, Søren Brunak, Hercules Dalianis
2015	—	`conf`	HEALTH BANK - A Workbench for Data Science Applications in Healthcare. CAiSE Industry Track Hercules Dalianis, Aron Henriksson, Maria Kvist, Sumithra Velupillai, Rebecka Weegar
2015	J	`jnl`	Identifying adverse drug event information in clinical notes with distributional semantic representations of context. J. Biomed. Informatics Aron Henriksson, Maria Kvist, Hercules Dalianis, Martin Duneld
2015	J	`jnl`	Louhi 2014: Special issue on health text mining and information analysis. BMC Medical Informatics Decis. Mak. Sumithra Velupillai, Martin Duneld, Aron Henriksson, Maria Kvist, Maria Skeppstedt, Hercules Dalianis
2015	—	`conf`	Modeling electronic health records in ensembles of semantic spaces for adverse drug event detection. BIBM Aron Henriksson, Jing Zhao, Henrik Boström, Hercules Dalianis
2015	B	`conf`	Modeling heterogeneous clinical sequence data in semantic space for adverse drug event detection. DSAA Aron Henriksson, Jing Zhao, Henrik Boström, Hercules Dalianis
2014	J	`jnl`	Automatic recognition of disorders, findings, pharmaceuticals and body structures from clinical text: An annotation and machine learning study. J. Biomed. Informatics Maria Skeppstedt, Maria Kvist, Gunnar H. Nilsson, Hercules Dalianis
2014	Misc	`conf`	Clinical Natural Language Processing in Languages Other Than English. AMIA Aurélie Névéol, Hercules Dalianis, Guergana Savova, Pierre Zweigenbaum
2014	—	`ch.`	Clinical Text Retrieval - An Overview of Basic Building Blocks and Applications. Professional Search in the Modern World Hercules Dalianis
2014	J	`jnl`	Cue-based assertion classification for Swedish clinical text - Developing a lexicon for pyConTextSwe. Artif. Intell. Medicine Sumithra Velupillai, Maria Skeppstedt, Maria Kvist, Danielle L. Mowery, Brian E. Chapman, Hercules Dalianis, Wendy W. Chapman
2014	—	`conf`	Generating features for named entity recognition by learning prototypes in semantic space: The case of de-identifying health records. BIBM Aron Henriksson, Hercules Dalianis, Stewart Kowalski
2014	—	`ed.`	Proceedings of the 5th International Workshop on Health Text Mining and Information Analysis, Louhi@EACL 2014, Gothenburg, Sweden, April 27, 2014 Louhi@EACL Sumithra Velupillai, Martin Duneld, Maria Kvist, Hercules Dalianis, Maria Skeppstedt, Aron Henriksson
2013	—	`conf`	Automatic Clinical Text De-Identification: Is It Worth It, and Could It Work for Me? MedInfo Stéphane M. Meystre, Hercules Dalianis, John S. Aberdeen, Bradley A. Malin
2013	—	`conf`	Negation Scope Delimitation in Clinical Text Using Three Approaches: NegEx; PyConTextNLP and SynNeg. NODALIDA Hideyuki Tanushi, Hercules Dalianis, Martin Duneld, Maria Kvist, Maria Skeppstedt, Sumithra Velupillai
2013	—	`conf`	Using Text Prediction for Facilitating Input and Improving Readability of Clinical Text. MedInfo Magnus Ahltorp, Maria Skeppstedt, Hercules Dalianis, Maria Kvist
2012	—	`conf`	Natural Language Generation from SNOMED Specifications. CLEF (Online Working Notes/Labs/Workshop) Mattias Kanhov, Xuefeng Feng, Hercules Dalianis
2012	B	`conf`	Rule-based Entity Recognition and Coverage of SNOMED CT in Swedish Clinical Text. LREC Maria Skeppstedt, Maria Kvist, Hercules Dalianis
2011	J	`jnl`	Characteristics of Finnish and Swedish intensive care nursing narratives: a comparative analysis to support the development of clinical language technologies. J. Biomed. Semant. Helen Allvin, Elin Carlsson, Hercules Dalianis, Riitta Danielsson-Ojala, Vidas Daudaravicius, Martin Hassel, Dimitrios Kokkinakis, Heljä Lundgrén-Laine, Gunnar H. Nilsson, Øystein Nytrø, Sanna Salanterä, Maria Skeppstedt, Hanna Suominen, Sumithra Velupillai
2011	—	`conf`	Comparing Manual Text Patterns and Machine Learning for Classification of E-Mails for Automatic Answering by a Government Agency. CICLing (2) Hercules Dalianis, Jonas Sjöbergh, Eriks Sneiders
2011	—	`conf`	Factuality Levels of Diagnoses in Swedish Clinical Text. MIE Sumithra Velupillai, Hercules Dalianis, Maria Kvist
2011	J	`jnl`	Louhi 2010: Special issue on Text and Data Mining of Health Documents. J. Biomed. Semant. Hercules Dalianis, Martin Hassel, Sumithra Velupillai
2011	—	`conf`	User Centered Development of Automatic E-mail Answering for the Public Sector. HCITOCH Teresa Cerratto-Pargman, Ola Knutsson, E. Celikten, Eriks Sneiders, Hercules Dalianis
2010	—	`conf`	Characteristics and Analysis of Finnish and Swedish Clinical Intensive Care Nursing Narratives. Louhi@NAACL-HLT Helen Allvin, Elin Carlsson, Hercules Dalianis, Riitta Danielsson-Ojala, Vidas Daudaravicius, Martin Hassel, Dimitrios Kokkinakis, Heljä Lundgrén-Laine, Gunnar H. Nilsson, Øystein Nytrø, Sanna Salanterä, Maria Skeppstedt, Hanna Suominen, Sumithra Velupillai
2010	—	`conf`	Clustering E-Mails for the Swedish Social Insurance Agency - What Part of the E-Mail Thread Gives the Best Quality? IceTAL Hercules Dalianis, Magnus Rosell, Eriks Sneiders
2010	B	`conf`	Creating a Reusable English-Chinese Parallel Corpus for Bilingual Dictionary Construction. LREC Hercules Dalianis, Hao-chun Xing, Xin Zhang
2010	—	`conf`	Creating and evaluating a consensus for negated and speculative words in a Swedish clinical corpus. NeSp-NLP@ACL Hercules Dalianis, Maria Skeppstedt
2010	J	`jnl`	De-identifying Swedish clinical text - refinement of a gold standard and experiments with Conditional random fields. J. Biomed. Semant. Hercules Dalianis, Sumithra Velupillai
2010	B	`conf`	How Certain are Clinical Assessments? Annotating Swedish Clinical Text for (Un)certainties, Speculations and Negations. LREC Hercules Dalianis, Sumithra Velupillai
2010	B	`conf`	Influence of Module Order on Rule-Based De-identification of Personal Names in Electronic Patient Records Written in Swedish. LREC Elin Carlsson, Hercules Dalianis
2010	—	`ed.`	Proceedings of the Second Louhi Workshop on Text and Data Mining of Health Documents, Louhi@NAACL-HLT 2010, Los Angeles, CA, USA, June 5, 2010 Louhi@NAACL-HLT Hercules Dalianis, Martin Hassel, Gunnar H. Nilsson
2010	—	`conf`	Uncertainty Detection as Approximate Max-Margin Sequence Labelling. CoNLL Shared Task Oscar Täckström, Sumithra Velupillai, Martin Hassel, Gunnar Eriksson, Hercules Dalianis, Jussi Karlgren
2009	—	`conf`	Automatic training of lemmatization rules that handle morphological changes in pre-, in- and suffixes alike. ACL/IJCNLP Bart Jongejan, Hercules Dalianis
2009	—	`conf`	Data Migration Between Web Content Management Systems. MCIS Theodora Zarmpou, Hercules Dalianis, Maro Vlachopoulou
2009	J	`jnl`	Developing a standard for de-identifying electronic patient records written in Swedish: Precision, recall and F-measure in a manual and computerized annotation trial. Int. J. Medical Informatics Sumithra Velupillai, Hercules Dalianis, Martin Hassel, Gunnar H. Nilsson
2009	Misc	`conf`	Identification of Parallel Text Pairs Using Fingerprints. RANLP Martin Hassel, Hercules Dalianis
2009	—	`conf`	Is De-identification of Electronic Health Records Possible? OR Can We Use Health Record Corpora for Research? AAAI Fall Symposium: Virtual Healthcare Interaction Hercules Dalianis, Gunnar H. Nilsson, Sumithra Velupillai
2009	—	`conf`	Using Uplug and SiteSeeker to construct a cross language search engine for Scandinavian languages. NODALIDA Hercules Dalianis, Martin Rimka, Viggo Kann
2008	B	`conf`	Experiments to Investigate the Connection between Case Distribution and Topical Relevance of Search Terms in an Information Retrieval Setting. LREC Jussi Karlgren, Hercules Dalianis, Bart Jongejan
2006	B	`conf`	Hand-crafted versus Machine-learned Inflectional Rules: The Euroling-SiteSeeker Stemmer and CST's Lemmatiser. LREC Hercules Dalianis, Bart Jongejan
2005	—	`conf`	Improving search engine retrieval using a compound splitter for Swedish. NODALIDA Hercules Dalianis
2002	C	`conf`	Evaluating a Spelling Support in a Search Engine. NLDB Hercules Dalianis
2001	—	`conf`	Improving Precision in Information Retrieval for Swedish using Stemming. NODALIDA Johan Carlberger, Hercules Dalianis, Martin Duneld, Ola Knutsson
1997	A	`conf`	Explaining Conceptual Models - An Architecture and Design Principles. ER Hercules Dalianis, Paul Johannesson
1996	B	`conf`	On Lexical Aggregation and Ordering. INLG Hercules Dalianis, Eduard H. Hovy
1995	A	`conf`	Aggregation in the NL-generator of the Visual and Natural language Specification Tool. EACL Hercules Dalianis
1995	C	`conf`	Aggregation, Formal Specification and Natural Language Generation. NLDB Hercules Dalianis
1993	—	`conf`	Aggregation in Natural Language Generation. EWNLG Hercules Dalianis, Eduard H. Hovy
1992	A	`conf`	A Method for Validating a Conceptual Model by Natural Language Discourse Generation. CAiSE Hercules Dalianis