Henry van den Bedem

20 papers A* 1B 1C 4Journal 13Unranked 1

Year	Rank	Type	Title / Venue / Authors
2022	A*	`conf`	An efficient graph generative model for navigating ultra-large combinatorial synthesis libraries. NeurIPS Aryan Pedawi, Pawel Gniewek, Chaoyi Chang, Brandon M. Anderson, Henry van den Bedem
2022	J	`jnl`	An efficient graph generative model for navigating ultra-large combinatorial synthesis libraries. CoRR Aryan Pedawi, Pawel Gniewek, Chaoyi Chang, Brandon M. Anderson, Henry van den Bedem
2022	J	`jnl`	AtomNet PoseRanker: Enriching Ligand Pose Quality for Dynamic Proteins in Virtual High-Throughput Screens. J. Chem. Inf. Model. Kate A. Stafford, Brandon M. Anderson, Jon Sorenson, Henry van den Bedem
2022	J	`jnl`	Kinematic Vibrational Entropy Assessment and Analysis of SARS CoV-2 Main Protease. J. Chem. Inf. Model. Xiyu Chen, Sigrid Leyendecker, Henry van den Bedem
2020	C	`conf`	Sequence-guided protein structure determination using graph convolutional and recurrent networks. BIBE Po-Nan Li, Saulo Henrique Pires de Oliveira, Soichi Wakatsuki, Henry van den Bedem
2020	J	`jnl`	Sequence-guided protein structure determination using graph convolutional and recurrent networks. CoRR Po-Nan Li, Saulo Henrique Pires de Oliveira, Soichi Wakatsuki, Henry van den Bedem
2018	J	`jnl`	Collision-free poisson motion planning in ultra high-dimensional molecular conformation spaces. J. Comput. Chem. Rasmus Fonseca, Dominik Budday, Henry van den Bedem
2018	J	`jnl`	Kinematic Flexibility Analysis: Hydrogen Bonding Patterns Impart a Spatial Hierarchy of Protein Motion. CoRR Dominik Budday, Sigrid Leyendecker, Henry van den Bedem
2018	J	`jnl`	Kinematic Flexibility Analysis: Hydrogen Bonding Patterns Impart a Spatial Hierarchy of Protein Motion. J. Chem. Inf. Model. Dominik Budday, Sigrid Leyendecker, Henry van den Bedem
2017	—	`conf`	Fast, Clash-Free RNA Conformational Morphing using Molecular Junctions. BCB Amélie Héliou, Dominik Budday, Rasmus Fonseca, Henry van den Bedem
2017	J	`jnl`	Fast, clash-free RNA conformational morphing using molecular junctions. Bioinform. Amélie Héliou, Dominik Budday, Rasmus Fonseca, Henry van den Bedem
2016	J	`jnl`	Collision-Free Poisson Motion Planning in Ultra High-Dimensional Molecular Conformation Spaces. CoRR Rasmus Fonseca, Dominik Budday, Henry van den Bedem
2016	J	`jnl`	Probing RNA Native Conformational Ensembles with Structural Constraints. J. Comput. Biol. Rasmus Fonseca, Henry van den Bedem, Julie Bernauer
2015	J	`jnl`	Exposing Hidden Alternative Backbone Conformations in X-ray Crystallography Using qFit. PLoS Comput. Biol. Daniel A. Keedy, James S. Fraser, Henry van den Bedem
2015	B	`conf`	KGSrna: Efficient 3D Kinematics-Based Sampling for Nucleic Acids. RECOMB Rasmus Fonseca, Henry van den Bedem, Julie Bernauer
2015	J	`jnl`	Nullspace Sampling with Holonomic Constraints Reveals Molecular Mechanisms of Protein Gαs. PLoS Comput. Biol. Dimitar V. Pachov, Henry van den Bedem
2008	J	`jnl`	Efficient Algorithms to Explore Conformation Spaces of Flexible Protein Loops. IEEE ACM Trans. Comput. Biol. Bioinform. Peggy Yao, Ankur Dhanik, Nathan Marz, Ryan Propper, Charles Kou, Guanfeng Liu, Henry van den Bedem, Jean-Claude Latombe, Inbal Halperin-Landsberg, Russ B. Altman
2008	C	`conf`	Modeling Structural Heterogeneity in Proteins from X-Ray Data. WAFR Ankur Dhanik, Henry van den Bedem, Ashley Deacon, Jean-Claude Latombe
2007	C	`conf`	Efficient Algorithms to Explore Conformation Spaces of Flexible Protein Loops. WABI Ankur Dhanik, Peggy Yao, Nathan Marz, Ryan Propper, Charles Kou, Guanfeng Liu, Henry van den Bedem, Jean-Claude Latombe
2004	C	`conf`	Computing Protein Structures from Electron Density Maps: The Missing Fragment Problem. WAFR Itay Lotan, Henry van den Bedem, Ashley Deacon, Jean-Claude Latombe