Helen M. Byrne

41 papers Journal 37Unranked 4

Year	Rank	Type	Title / Venue / Authors
2026	J	`jnl`	Topological model selection: a case-study in tumour-induced angiogenesis. Bioinform. Robert A. McDonald, Helen M. Byrne, Heather A. Harrington, Thomas Thorne, Bernadette J. Stolz
2025	J	`jnl`	Multiscale modelling shows how cell-ECM interactions impact ECM fibre alignment and cell detachment. PLoS Comput. Biol. Juan Arellano-Tintó, Daria Stepanova, Helen M. Byrne, Philip K. Maini, Tomás Alarcón
2025	J	`jnl`	Topology across scales on heterogeneous cell data. PLoS Comput. Biol. Maria Torras-Pérez, Iris H. R. Yoon, Praveen Weeratunga, Ling-Pei Ho, Helen M. Byrne, Ulrike Tillmann, Heather A. Harrington
2024	J	`jnl`	Algebraic identifiability of partial differential equation models. CoRR Helen M. Byrne, Heather A. Harrington, Alexey Ovchinnikov, Gleb Pogudin, Hamid Rahkooy, Pedro Soto
2024	J	`jnl`	Enhanced perfusion following exposure to radiotherapy: A theoretical investigation. PLoS Comput. Biol. Jakub Köry, Vedang Narain, Bernadette J. Stolz, Jakob Kaeppler, Bostjan Markelc, Ruth J. Muschel, Philip K. Maini, Joe Pitt-Francis, Helen M. Byrne
2024	J	`jnl`	Homogenization of Nonlinear Blood Flow in Periodic Networks: The Limit of Small Haematocrit Heterogeneity. Multiscale Model. Simul. Yaron Ben-Ami, Brian D. Wood, Joe Pitt-Francis, Philip K. Maini, Helen M. Byrne
2023	J	`jnl`	Quantification of spatial and phenotypic heterogeneity in an agent-based model of tumour-macrophage interactions. PLoS Comput. Biol. Joshua Adam Bull, Helen M. Byrne
2023	J	`jnl`	The shape of cancer relapse: Topological data analysis predicts recurrence in paediatric acute lymphoblastic leukaemia. PLoS Comput. Biol. Salvador Chulián, Bernadette J. Stolz, Álvaro Martínez-Rubio, Cristina Blázquez Goñi, Juan F. Rodríguez Gutiérrez, Teresa Caballero Velázquez, Águeda Molinos Quintana, Manuel Ramirez-Orellana, Ana Castillo Robleda, José Luis Fuster Soler, Alfredo Minguela Puras, María V. Martínez Sánchez, María Rosa, Víctor M. Pérez-García, Helen M. Byrne
2022	J	`jnl`	A Method to Coarse-Grain MultiAgent Stochastic Systems with Regions of Multistability. Multiscale Model. Simul. Daria Stepanova, Helen M. Byrne, Philip K. Maini, Tomás Alarcón
2022	J	`jnl`	Explicit physics-informed neural networks for nonlinear closure: The case of transport in tissues. J. Comput. Phys. Ehsan Taghizadeh, Helen M. Byrne, Brian D. Wood
2022	J	`jnl`	Multiscale Methods for Signal Selection in Single-Cell Data. Entropy Renee S. Hoekzema, Lewis Marsh, Otto Sumray, Thomas M. Carroll, Xin Lu, Helen M. Byrne, Heather A. Harrington
2022	J	`jnl`	Multiscale methods for signal selection in single-cell data. CoRR Renee S. Hoekzema, Lewis Marsh, Otto Sumray, Xin Lu, Helen M. Byrne, Heather A. Harrington
2022	J	`jnl`	Statistical and Topological Summaries Aid Disease Detection for Segmented Retinal Vascular Images. CoRR John T. Nardini, Charles W. J. Pugh, Helen M. Byrne
2022	J	`jnl`	The Hallmarks of Mathematical Oncology. Proc. IEEE Joshua Adam Bull, Helen M. Byrne
2021	J	`jnl`	A multiscale model of complex endothelial cell dynamics in early angiogenesis. PLoS Comput. Biol. Daria Stepanova, Helen M. Byrne, Philip K. Maini, Tomás Alarcón
2021	J	`jnl`	Topological data analysis distinguishes parameter regimes in the Anderson-Chaplain model of angiogenesis. PLoS Comput. Biol. John T. Nardini, Bernadette J. Stolz, Kevin B. Flores, Heather A. Harrington, Helen M. Byrne
2020	J	`jnl`	A Mathematical Framework for Developing Freezing Protocols in the Cryopreservation of Cells. SIAM J. Appl. Math. Mohit P. Dalwadi, Sarah L. Waters, Helen M. Byrne, Ian J. Hewitt
2020	J	`jnl`	Chaste: Cancer, Heart and Soft Tissue Environment. J. Open Source Softw. Fergus R. Cooper, Ruth E. Baker, Miguel O. Bernabeu, Rafel Bordas, Louise Bowler, Alfonso Bueno-Orovio, Helen M. Byrne, Valentina Carapella, Louie Cardone-Noott, Jonathan Cooper, Sara Dutta, Benjamin D. Evans, Alexander G. Fletcher, James A. Grogan, Wenxian Guo, Daniel G. Harvey, Maurice Hendrix, David Kay, Jochen Kursawe, Philip K. Maini, Beth McMillan, Gary R. Mirams, James M. Osborne, Pras Pathmanathan, Joe Pitt-Francis, Martin Robinson, Blanca Rodríguez, Raymond J. Spiteri, David Gavaghan
2020	J	`jnl`	Mathematical modelling reveals cellular dynamics within tumour spheroids. PLoS Comput. Biol. Joshua Adam Bull, Franziska Mech, Tom Quaiser, Sarah L. Waters, Helen M. Byrne
2019	—	`conf`	Decomposing the Parameter Space of Biological Networks via a Numerical Discriminant Approach. MC Heather A. Harrington, Dhagash Mehta, Helen M. Byrne, Jonathan D. Hauenstein
2018	J	`jnl`	The importance of geometry in the corneal micropocket angiogenesis assay. PLoS Comput. Biol. James A. Grogan, Anthony J. Connor, Joe Pitt-Francis, Philip K. Maini, Helen M. Byrne
2017	J	`jnl`	A hierarchical Bayesian model for understanding the spatiotemporal dynamics of the intestinal epithelium. PLoS Comput. Biol. Oliver J. Maclaren, Aimée Parker, Carmen Pin, Simon R. Carding, Alastair J. M. Watson, Alexander G. Fletcher, Helen M. Byrne, Philip K. Maini
2017	J	`jnl`	Predicting the Influence of Microvascular Structure On Tumor Response to Radiotherapy. IEEE Trans. Biomed. Eng. James A. Grogan, Bostjan Markelc, Anthony J. Connor, Ruth J. Muschel, Joe Pitt-Francis, Philip K. Maini, Helen M. Byrne
2017	J	`jnl`	The role of the Hes1 crosstalk hub in Notch-Wnt interactions of the intestinal crypt. PLoS Comput. Biol. Sophie K. Kay, Heather A. Harrington, Sarah Shepherd, Keith Brennan, Trevor Dale, James M. Osborne, David J. Gavaghan, Helen M. Byrne
2015	J	`jnl`	Hybrid approaches for multiple-species stochastic reaction-diffusion models. J. Comput. Phys. Fabian Spill, Pilar Guerrero, Tomás Alarcón, Philip K. Maini, Helen M. Byrne
2014	—	`conf`	Computational horizons in cancer (CHIC): Developing meta- and hyper-multiscale models and repositories for in Silico Oncology - A brief technical outline of the project. IARWISOI Georgios S. Stamatakos, Dimitra D. Dionysiou, Fay Misichroni, Norbert M. Graf, Stefaan W. Van Gool, Rainer Bohle, Feng Dong, Marco Viceconti, Kostas Marias, Vangelis Sakkalis, Nikolaus Forgó, Ravi Radhakrishnan, Helen M. Byrne, Caterina Guiot, Philippe Büchler, Elias Neri, Anca I. D. Bucur, Bernard de Bono, Debora Testi, Manolis Tsiknakis
2014	—	`conf`	Simulating tumour vasculature at multiple scales. IARWISOI James A. Grogan, Philip K. Maini, Joe Pitt-Francis, Helen M. Byrne
2013	J	`jnl`	Heat or mass transfer from a sphere in Stokes flow at low Péclet number. Appl. Math. Lett. Christopher G. Bell, Helen M. Byrne, Jonathan P. Whiteley, Sarah L. Waters
2013	J	`jnl`	Inference of the Genetic Network Regulating Lateral Root Initiation in Arabidopsis thaliana. IEEE ACM Trans. Comput. Biol. Bioinform. Daniele Muraro, Ute Voß, Michael Wilson, Malcolm Bennett, Helen M. Byrne, Ive De Smet, Charlie Hodgman, John R. King
2012	J	`jnl`	Qualitative analysis of an integro-differential equation model of periodic chemotherapy. Appl. Math. Lett. Harsh Vardhan Jain, Helen M. Byrne
2011	J	`jnl`	Techniques for analysing pattern formation in populations of stem cells and their progeny. BMC Bioinform. John A. Fozard, Glen R. Kirkham, Lee D. K. Buttery, John R. King, Oliver E. Jensen, Helen M. Byrne
2009	J	`jnl`	A Three Species Model to Simulate Application of Hyperbaric Oxygen Therapy to Chronic Wounds. PLoS Comput. Biol. Jennifer A. Flegg, Donald L. S. McElwain, Helen M. Byrne, Ian W. Turner
2009	J	`jnl`	Chaste: A test-driven approach to software development for biological modelling. Comput. Phys. Commun. Joe Pitt-Francis, Pras Pathmanathan, Miguel O. Bernabeu, Rafel Bordas, Jonathan Cooper, Alexander G. Fletcher, Gary R. Mirams, Philip J. Murray, James M. Osborne, Alex Walter, S. Jonathan Chapman, Alan Garny, Ingeborg M. M. van Leeuwen, Philip K. Maini, Blanca Rodríguez, Sarah L. Waters, Jonathan P. Whiteley, Helen M. Byrne, David Gavaghan
2008	J	`jnl`	A theoretical study of the response of vascular tumours to different types of chemotherapy. Math. Comput. Model. Jasmina Panovska, Helen M. Byrne, Philip K. Maini
2006	—	`conf`	Cancer disease: integrative modelling approaches. ISBI Helen M. Byrne, Markus R. Owen, Tomás Alarcón, Philip K. Maini
2006	J	`jnl`	Modelling the response of spatially structured tumours to chemotherapy: Drug kinetics. Math. Comput. Model. E. S. Norris, John R. King, Helen M. Byrne
2006	J	`jnl`	The impact of cell crowding and active cell movement on vascular tumour growth. Networks Heterog. Media Russell Betteridge, Markus R. Owen, Helen M. Byrne, Tomás Alarcón, Philip K. Maini
2005	J	`jnl`	A Multiple Scale Model for Tumor Growth. Multiscale Model. Simul. Tomás Alarcón, Helen M. Byrne, Philip K. Maini
2003	J	`jnl`	A two-phase model of solid tumour growth. Appl. Math. Lett. Helen M. Byrne, John R. King, D. L. Sean McElwain, Luigi Preziosi
2001	J	`jnl`	An analysis of a mathematical model of trophoblast invasion. Appl. Math. Lett. Helen M. Byrne, Mark A. J. Chaplain, Graeme J. Pettet, D. L. Sean McElwain
1994	J	`jnl`	Stable Solutions for a Catalytic Converter. SIAM J. Appl. Math. Helen M. Byrne, John Norbury