Heikki Hyyrö

42 papers B 6C 11Misc 4Journal 13Unranked 7
YearRankTypeTitle / Venue / Authors
2023 — conf
BeLLE: Multinational Research Collaboration on Bebras & ViLLE.
ITiCSE (2)
Heidi Kaarto, Heikki Hyyrö, Marika Parviainen
2018 J jnl
A hardness result and new algorithm for the longest common palindromic subsequence problem.
Inf. Process. Lett.
Shunsuke Inenaga, Heikki Hyyrö
2018 B conf
Computing longest common square subsequences.
CPM
Takafumi Inoue, Shunsuke Inenaga, Heikki Hyyrö, Hideo Bannai, Masayuki Takeda
2018 J jnl
Dynamic RLE-Compressed Edit Distance Tables Under General Weighted Cost Functions.
Int. J. Found. Comput. Sci.
Heikki Hyyrö, Shunsuke Inenaga
2018 — conf
GQA: Grammatical Question Answering for RDF Data.
SemWebEval@ESWC
Elizaveta Zimina, Jyrki Nummenmaa, Kalervo Järvelin, Jaakko Peltonen, Kostas Stefanidis, Heikki Hyyrö
2017 C conf
Mining Bit-Parallel LCS-length Algorithms.
SPIRE
Heikki Hyyrö
2016 J jnl
A hardness result and new algorithm for the longest common palindromic subsequence problem.
CoRR
Shunsuke Inenaga, Heikki Hyyrö
2016 B conf
Compacting a Dynamic Edit Distance Table by RLE Compression.
SOFSEM
Heikki Hyyrö, Shunsuke Inenaga
2015 J jnl
Dynamic edit distance table under a general weighted cost function.
J. Discrete Algorithms
Heikki Hyyrö, Kazuyuki Narisawa, Shunsuke Inenaga
2015 J jnl
Signal analysis and classification methods for the calcium transient data of stem cell-derived cardiomyocytes.
Comput. Biol. Medicine
Martti Juhola, Kirsi Penttinen, Henry Joutsijoki, Kirsi Varpa, Jyri Saarikoski, Jyrki Rasku, Harri Siirtola, Kati Iltanen, Jorma Laurikkala, Heikki Hyyrö, Jari A. K. Hyttinen, Katriina Aalto-Setälä
2014 — conf
On computation of calcium cycling anomalies in cardiomyocytes data.
EMBC
Martti Juhola, Henry Joutsijoki, Kirsi Varpa, Jyri Saarikoski, Jyrki Rasku, Kati Iltanen, Jorma Laurikkala, Heikki Hyyrö, Jorge Avalos-Salguero, Harri Siirtola, Kirsi Penttinen, Katriina Aalto-Setälä
2010 B conf
Dynamic Edit Distance Table under a General Weighted Cost Function.
SOFSEM
Heikki Hyyrö, Kazuyuki Narisawa, Shunsuke Inenaga
2009 Misc conf
An Input Sensitive Online Algorithm for LCS Computation.
PSC
Heikki Hyyrö
2009 C ed.
String Processing and Information Retrieval, 16th International Symposium, SPIRE 2009, Saariselkä, Finland, August 25-27, 2009, Proceedings
SPIRE
Jussi Karlgren, Jorma Tarhio, Heikki Hyyrö
2008 C conf
An Efficient Linear Space Algorithm for Consecutive Suffix Alignment under Edit Distance (Short Preliminary Paper).
SPIRE
Heikki Hyyrö
2008 J jnl
Improving the bit-parallel NFA of Baeza-Yates and Navarro for approximate string matching.
Inf. Process. Lett.
Heikki Hyyrö
2008 C conf
Notes on generating completely condensed d-neighborhoods.
IWOCA
Heikki Hyyrö
2006 J jnl
Bit-parallel Computation of Local Similarity Score Matrices with Unitary Weights.
Int. J. Found. Comput. Sci.
Heikki Hyyrö, Gonzalo Navarro
2006 C conf
Tighter Packed Bit-Parallel NFA for Approximate String Matching.
CIAA
Heikki Hyyrö
2005 J jnl
Bit-Parallel Witnesses and Their Applications to Approximate String Matching.
Algorithmica
Heikki Hyyrö, Gonzalo Navarro
2005 J jnl
Bit-parallel approximate string matching algorithms with transposition.
J. Discrete Algorithms
Heikki Hyyrö
2005 Misc conf
Bit-parallel computation of local similarity score matrices with unitary weights.
PSC
Heikki Hyyrö, Gonzalo Navarro
2005 B conf
Fast Bit-Vector Algorithms for Approximate String Matching Under Indel Distance.
SOFSEM
Heikki Hyyrö, Yoan J. Pinzón, Ayumi Shinohara
2005 J jnl
Increased bit-parallelism for approximate and multiple string matching.
ACM J. Exp. Algorithmics
Heikki Hyyrö, Kimmo Fredriksson, Gonzalo Navarro
2005 — conf
New Bit-Parallel Indel-Distance Algorithm.
WEA
Heikki Hyyrö, Yoan J. Pinzón, Ayumi Shinohara
2005 J jnl
On exact string matching of unique oligonucleotides.
Comput. Biol. Medicine
Heikki Hyyrö, Martti Juhola, Mauno Vihinen
2005 C conf
Restricted Transposition Invariant Approximate String Matching Under Edit Distance.
SPIRE
Heikki Hyyrö
2004 Misc conf
A Note on Bit-Parallel Alignment Computation.
PSC
Heikki Hyyrö
2004 C conf
An Improvement and an Extension on the Hybrid Index for Approximate String Matching.
SPIRE
Heikki Hyyrö
2004 J jnl
An O(N
IEEE ACM Trans. Comput. Biol. Bioinform.
Hideo Bannai, Heikki Hyyrö, Ayumi Shinohara, Masayuki Takeda, Kenta Nakai, Satoru Miyano
2004 B conf
Finding Optimal Pairs of Cooperative and Competing Patterns with Bounded Distance.
Discovery Science
Shunsuke Inenaga, Hideo Bannai, Heikki Hyyrö, Ayumi Shinohara, Masayuki Takeda, Kenta Nakai, Satoru Miyano
2004 C conf
Finding Optimal Pairs of Patterns.
WABI
Hideo Bannai, Heikki Hyyrö, Ayumi Shinohara, Masayuki Takeda, Kenta Nakai, Satoru Miyano
2004 — conf
Increased Bit-Parallelism for Approximate String Matching.
WEA
Heikki Hyyrö, Kimmo Fredriksson, Gonzalo Navarro
2004 — conf
On Bit-Parallel Processing of Multi-byte Text.
AIRS
Heikki Hyyrö, Jun Takaba, Ayumi Shinohara, Masayuki Takeda
2003 J jnl
A Bit-Vector Algorithm for Computing Levenshtein and Damerau Edit Distances.
Nord. J. Comput.
Heikki Hyyrö
2003 C conf
A Practical Index for Genome Searching.
SPIRE
Heikki Hyyrö, Gonzalo Navarro
2003 C conf
Bit-Parallel Approximate String Matching Algorithms with Transposition.
SPIRE
Heikki Hyyrö
2003 — —
Practical Methods for Approximate String Matching.
Heikki Hyyrö
2002 Misc conf
A Bit-Vector Algorithm for Computing Levenshtein and Damerau Edit Distances.
PSC
Heikki Hyyrö
2002 B conf
Faster Bit-Parallel Approximate String Matching.
CPM
Heikki Hyyrö, Gonzalo Navarro
2001 — conf
On Approximate String Matching of Unique Oligonucleotides.
MedInfo
Heikki Hyyrö, Mauno Vihinen, Martti Juhola
2001 C conf
On Using Two-Phase Filtering in Indexed Approximate String Matching with Application to Searching Unique Oligonucleotides.
SPIRE
Heikki Hyyrö