Harold R. Garner

27 papers A 1B 1Journal 25
YearRankTypeTitle / Venue / Authors
2021 A conf
Scaling Out a Combinatorial Algorithm for Discovering Carcinogenic Gene Combinations to Thousands of GPUs.
IPDPS
Sajal Dash, Qais Al-Hajri, Wu-chun Feng, Harold R. Garner, Ramu Anandakrishnan
2019 J jnl
CAGm: a repository of germline microsatellite variations in the 1000 genomes project.
Nucleic Acids Res.
Nicholas Kinney, Kyle Titus-Glover, Jonathan D. Wren, Robin T. Varghese, Pawel Michalak, Han Liao, Ramu Anandakrishnan, Arichanah Pulenthiran, Lin Kang, Harold R. Garner
2019 J jnl
Estimating the number of genetic mutations (hits) required for carcinogenesis based on the distribution of somatic mutations.
PLoS Comput. Biol.
Ramu Anandakrishnan, Robin T. Varghese, Nicholas Kinney, Harold R. Garner
2018 J jnl
Quantifying medical student clinical experiences via an ICD Code Logging App.
Int. J. Medical Informatics
Fred Rawlins, Cameron Sumpter, Dean Sutphin, Harold R. Garner
2014 J jnl
BioFlow: a web based workflow management software for design and execution of genomics pipelines.
Source Code Biol. Medicine
Harold R. Garner, Ashwin Puthige
2014 J jnl
Discretized Gaussian mixture for genotyping of microsatellite loci containing homopolymer runs.
Bioinform.
Hongseok Tae, Dong-Yun Kim, John McCormick, Robert E. Settlage, Harold R. Garner
2014 J jnl
EvoCor: a platform for predicting functionally related genes using phylogenetic and expression profiles.
Nucleic Acids Res.
W. James Dittmar, Lauren McIver, Pawel Michalak, Harold R. Garner, Gregorio Valdez
2014 J jnl
Updating microbial genomic sequences: improving accuracy & innovation.
BioData Min.
Hongseok Tae, Enusha Karunasena, Jasmin H. Bavarva, Harold R. Garner
2013 J jnl
ReviSTER: an automated pipeline to revise misaligned reads to simple tandem repeats.
Bioinform.
Hongseok Tae, Kevin W. McMahon, Robert E. Settlage, Jasmin H. Bavarva, Harold R. Garner
2010 J jnl
Identifying duplicate content using statistically improbable phrases.
Bioinform.
Mounir Errami, Zhaohui Sun, Angela C. George, Tara C. Long, Michael A. Skinner, Jonathan D. Wren, Harold R. Garner
2009 J jnl
Application of multiple statistical tests to enhance mass spectrometry-based biomarker discovery.
BMC Bioinform.
Niclas Chiang Tan, Wayne G. Fisher, Kevin P. Rosenblatt, Harold R. Garner
2009 J jnl
Déjà vu: a database of highly similar citations in the scientific literature.
Nucleic Acids Res.
Mounir Errami, Zhaohui Sun, Tara C. Long, Angela C. George, Harold R. Garner
2008 J jnl
Déjà vu - A study of duplicate citations in Medline.
Bioinform.
Mounir Errami, Justin M. Hicks, Wayne G. Fisher, David Trusty, Jonathan D. Wren, Tara C. Long, Harold R. Garner
2008 J jnl
Exhaustive prediction of disease susceptibility to coding base changes in the human genome.
BMC Bioinform.
Vinayak Kulkarni, Mounir Errami, Robert Barber, Harold R. Garner
2007 J jnl
A Robust Biomarker Discovery Pipeline for High-Performance Mass Spectrometry Data.
J. Bioinform. Comput. Biol.
Wayne G. Fisher, Kevin P. Rosenblatt, David A. Fishman, Gordon R. Whiteley, Alvydas Mikulskis, Scott A. Kuzdzal, Mary F. Lopez, Niclas Chiang Tan, Dwight C. German, Harold R. Garner
2007 J jnl
Clustering microarray-derived gene lists through implicit literature relationships.
Bioinform.
Mark F. Burkart, Jonathan D. Wren, Jason I. Herschkowitz, Charles M. Perou, Harold R. Garner
2007 J jnl
eTBLAST: a web server to identify expert reviewers, appropriate journals and similar publications.
Nucleic Acids Res.
Mounir Errami, Jonathan D. Wren, Justin M. Hicks, Harold R. Garner
2007 J jnl
sIR: siRNA Information Resource, a web-based tool for siRNA sequence design and analysis and an open access siRNA database.
BMC Bioinform.
Jyoti K. Shah, Harold R. Garner, Michael A. White, David S. Shames, John D. Minna
2006 J jnl
Text similarity: an alternative way to search MEDLINE.
Bioinform.
James Lewis, Stephan Ossowski, Justin M. Hicks, Mounir Errami, Harold R. Garner
2005 J jnl
Biomedical term mapping databases.
Nucleic Acids Res.
Jonathan D. Wren, Jeffrey T. Chang, James Pustejovsky, Eytan Adar, Harold R. Garner, Russ B. Altman
2005 J jnl
Evidence for the regulation of alternative splicing via complementary DNA sequence repeats.
Bioinform.
Yun Lian, Harold R. Garner
2004 J jnl
Knowledge discovery by automated identification and ranking of implicit relationships.
Bioinform.
Jonathan D. Wren, Raffi Bekeredjian, Jelena A. Stewart, Ralph V. Shohet, Harold R. Garner
2004 J jnl
Shared relationship analysis: ranking set cohesion and commonalities within a literature-derived relationship network.
Bioinform.
Jonathan D. Wren, Harold R. Garner
2002 J jnl
ARROGANT: an application to manipulate large gene collections.
Bioinform.
Amit V. Kulkarni, Noelle Sevilir Williams, Yun Lian, Jonathan D. Wren, David Mittelman, Alexander Pertsemlidis, Harold R. Garner
2002 B conf
Applied computational genomics: polymorphism prediction, data mining and genomic analysis.
RECOMB
Harold R. Garner
2002 J jnl
SIGNAL-Sequence Information and GeNomic AnaLysis.
Comput. Methods Programs Biomed.
Jonathan D. Wren, David A. Mittelman, Harold R. Garner
2000 J jnl
MAD: a suite of tools for microarray data management and processing.
Bioinform.
Birong Liao, Walker Hale, Charles B. Epstein, Ronald A. Butow, Harold R. Garner