Haoqi Sun

37 papers B 2C 2Journal 24Unranked 9
YearRankTypeTitle / Venue / Authors
2026 J jnl
Automated Electronic Health Record Phenotyping of Acute and Subacute Subdural Hematoma.
Algorithms
Gregory B. Hooke, Haoqi Sun, Catherine Clive, Spencer Boris, Niels Turley, Lydia Petersen, Jaden Searle, Bram Overmeer, Ali Han Yaramis, Karan Singh, Arjun Singh, Daniel Sumsion, Aditya Gupta, Manohar Ghanta, Valdery Moura Junior, Marta P. B. Fernandes, Katie L. Stone, Dennis Hwang, Lynn Marie Trotti, Gari D. Clifford, Umakanth Katwa, Shibani S. Mukerji, Sahar F. Zafar, Robert J. Thomas, M. Brandon Westover
2025 — conf
An Atlas of Electroencephalographic Infraslow Oscillation Features During Sleep in a Clinical Cohort.
BIBM
Ella Tianjing Luo, Haoqi Sun, Tingying Helen Zeng, Elizaveta Tremsina
2025 J jnl
Automated phenotyping of mild cognitive impairment and Alzheimer's disease and related dementias using electronic health records.
Int. J. Medical Informatics
Ruoqi Wei, Stephanie S. Buss, Rebecca Milde, Marta Fernandes, Daniel Sumsion, Elijah Davis, Wan-Yee Kong, Yiwen Xiong, Jet Veltink, Samvrit Rao, Tara M. Westover, Lydia Petersen, Niels Turley, Arjun Singh, Sudeshna Das, Valdery Moura Junior, Manohar Ghanta, Aditya Gupta, Jennifer Kim, Alice D. Lam, Katie L. Stone, Emmanuel Mignot, Dennis Hwang, Lynn Marie Trotti, Gari D. Clifford, Umakanth Katwa, Robert J. Thomas, Shibani Mukerji, Sahar F. Zafar, M. Brandon Westover, Haoqi Sun
2025 J jnl
Bridging Large Language Models and Single-Cell Transcriptomics in Dissecting Selective Motor Neuron Vulnerability.
CoRR
Douglas Jiang, Zilin Dai, Luxuan Zhang, Qiyi Yu, Haoqi Sun, Feng Tian
2025 J jnl
Continuous sleep depth index annotation with deep learning yields novel digital biomarkers for sleep health.
npj Digit. Medicine
Songchi Zhou, Ge Song, Haoqi Sun, Deyun Zhang, Yue Leng, M. Brandon Westover, Shenda Hong
2025 J jnl
Contrastive Learning Enhances Language Model Based Cell Embeddings for Low-Sample Single Cell Transcriptomics.
CoRR
Luxuan Zhang, Douglas Jiang, Qinglong Wang, Haoqi Sun, Feng Tian
2025 — conf
Functional Connectivity of Brain Wave During Sleep Onset Differentiates Autism Spectrum Disorder.
BIBM
Bryan K. Wang, Haoqi Sun, Mikhail Y. Shalaginov, Tingying Helen Zeng
2024 J jnl
Annotation of Sleep Depth Index with Scalable Deep Learning Yields Novel Digital Biomarkers for Sleep Health.
CoRR
Songchi Zhou, Ge Song, Haoqi Sun, Yue Leng, M. Brandon Westover, Shenda Hong
2024 J jnl
Contactless Polysomnography: What Radio Waves Tell Us about Sleep.
CoRR
Hao He, Chao Li, Wolfgang Ganglberger, Kaileigh Gallagher, Rumen Hristov, Michail Ouroutzoglou, Haoqi Sun, Jimeng Sun, M. Brandon Westover, Dina Katabi
2024 J jnl
Corrigendum to "Brain health scores to predict neurological outcomes from electronic health records" [Int. J. Med. Inform. (2023) 105270].
Int. J. Medical Informatics
Marta P. B. Fernandes, Haoqi Sun, Zeina Chemali, Shibani S. Mukerji, Lidia M. V. R. Moura, Sahar F. Zafar, Akshata Sonni, Alessandro Biffi, Jonathan Rosand, M. Brandon Westover
2023 J jnl
Brain health scores to predict neurological outcomes from electronic health records.
Int. J. Medical Informatics
Marta P. B. Fernandes, Haoqi Sun, Zeina Chemali, Shibani S. Mukerji, Lidia M. V. R. Moura, Sahar F. Zafar, Akshata Sonni, Alessandro Biffi, Jonathan Rosand, M. Brandon Westover
2023 J jnl
Classification of neurologic outcomes from medical notes using natural language processing.
Expert Syst. Appl.
Marta B. Fernandes, Navid Valizadeh, Haitham Alabsi, Syed A. Quadri, Ryan A. Tesh, Abigail A. Bucklin, Haoqi Sun, Aayushee Jain, Laura Brenner, Elissa M. Ye, Wendong Ge, Sarah I. Collens, Stacie Lin, Sudeshna Das, Gregory K. Robbins, Sahar F. Zafar, Shibani S. Mukerji, M. Brandon Westover
2022 J jnl
Age estimation from sleep studies using deep learning predicts life expectancy.
npj Digit. Medicine
Andreas Brink-Kjaer, Eileen B. Leary, Haoqi Sun, M. Brandon Westover, Katie L. Stone, Paul E. Peppard, Nancy E. Lane, Peggy M. Cawthon, Susan Redline, Poul Jennum, Helge B. D. Sørensen, Emmanuel Mignot
2022 J jnl
Automated Scoring of Respiratory Events in Sleep With a Single Effort Belt and Deep Neural Networks.
IEEE Trans. Biomed. Eng.
Thijs E. Nassi, Wolfgang Ganglberger, Haoqi Sun, Abigail A. Bucklin, Siddharth Biswal, Michel J. A. M. van Putten, Robert J. Thomas, M. Brandon Westover
2022 J jnl
How Machine Learning is Powering Neuroimaging to Improve Brain Health.
Neuroinformatics
Nalini M. Singh, Jordan B. Harrod, Sandya Subramanian, Mitchell B. Robinson, Ken Chang, Suheyla Cetin Karayumak, Adrian Vasile Dalca, Simon B. Eickhoff, Michael Fox, Loraine Franke, Polina Golland, Daniel Haehn, Juan Eugenio Iglesias, Lauren J. O'Donnell, Yangming Ou, Yogesh Rathi, Shan H. Siddiqi, Haoqi Sun, M. Brandon Westover, Susan L. Whitfield-Gabrieli, Randy L. Gollub
2022 J jnl
Why Interpretable Causal Inference is Important for High-Stakes Decision Making for Critically Ill Patients and How To Do It.
CoRR
Harsh Parikh, Kentaro Hoffman, Haoqi Sun, Wendong Ge, Jin Jing, Rajesh Amerineni, Lin Liu, Jimeng Sun, Sahar F. Zafar, Aaron Struck, Alexander Volfovsky, Cynthia Rudin, M. Brandon Westover
2021 J jnl
Automated Respiratory Event Detection Using Deep Neural Networks.
CoRR
Thijs E. Nassi, Wolfgang Ganglberger, Haoqi Sun, Abigail A. Bucklin, Siddharth Biswal, Michel J. A. M. van Putten, Robert J. Thomas, M. Brandon Westover
2021 — conf
Deep Learning Based Anomaly Detection for Muti-dimensional Time Series: A Survey.
CNCERT
Zhipeng Chen, Zhang Peng, Xueqiang Zou, Haoqi Sun
2021 J jnl
Sleep Apnea and Respiratory Anomaly Detection from a Wearable Band and Oxygen Saturation.
CoRR
Wolfgang Ganglberger, Abigail A. Bucklin, Ryan A. Tesh, Madalena Da Silva Cardoso, Haoqi Sun, Michael J. Leone, Luis Paixao, Ezhil Panneerselvam, Elissa M. Ye, B. Taylor Thompson, Oluwaseun Akeju, David Kuller, Robert J. Thomas, M. Brandon Westover
2020 — conf
A Task Execution Framework Based on Aging Indicator and SARIMI.
ISPA/BDCloud/SocialCom/SustainCom
Minghao Tang, Peng Zhang, Haoqi Sun, Lei Zhang
2020 J jnl
Adaptive Sedation Monitoring From EEG in ICU Patients With Online Learning.
IEEE Trans. Biomed. Eng.
Wei-Long Zheng, Haoqi Sun, Oluwaseun Akeju, M. Brandon Westover
2020 J jnl
Natural Language Processing to Detect Cognitive Concerns in Electronic Health Records Using Deep Learning.
CoRR
Zhuoqiao Hong, Colin G. Magdamo, Yi-han Sheu, Prathamesh Mohite, Ayush Noori, Elissa M. Ye, Wendong Ge, Haoqi Sun, Laura Brenner, Gregory K. Robbins, Shibani Mukerji, Sahar F. Zafar, Nicole Benson, Lidia M. V. R. Moura, John Hsu, Bradley T. Hyman, M. Brandon Westover, Deborah Blacker, Sudeshna Das
2019 J jnl
Automated tracking of level of consciousness and delirium in critical illness using deep learning.
npj Digit. Medicine
Haoqi Sun, Eyal Kimchi, Oluwaseun Akeju, Sunil Belur Nagaraj, Lauren M. McClain, David W. Zhou, Emily Boyle, Wei-Long Zheng, Wendong Ge, M. Brandon Westover
2019 — conf
Automatic Detection of General Anesthetic-States using ECG-Derived Autonomic Nervous System Features.
EMBC
Sam L. Polk, Kimia Kashkooli, Sunil Belur Nagaraj, Shubham Chamadia, James M. Murphy, Haoqi Sun, M. Brandon Westover, Riccardo Barbieri, Oluwaseun Akeju
2019 — conf
Drug-Specific Models Improve the Performance of an EEG-based Automated Brain-State Prediction System.
EMBC
Kimia Kashkooli, Sam L. Polk, Shubham Chamadia, Eunice Hahm, Breanna Ethridge, Jacob Gitlin, Reine Ibala, Jennifer Mekonnen, Juan Pedemonte, James M. Murphy, Haoqi Sun, M. Brandon Westover, Oluwaseun Akeju
2018 — conf
A Mean Field Model of Acute Hepatic Encephalopathy.
EMBC
Jiang-Ling Song, Haoqi Sun, Jing Jin, Luis Carlos, Lingya Chao, Sydney S. Cash, Rui Zhang, M. Brandon Westover
2018 — conf
Brain Monitoring of Sedation in the Intensive Care Unit Using a Recurrent Neural Network.
EMBC
Haoqi Sun, Sunil Belur Nagaraj, Oluwaseun Akeju, Patrick L. Purdon, M. Brandon Westover
2018 J jnl
Expert-level sleep scoring with deep neural networks.
J. Am. Medical Informatics Assoc.
Siddharth Biswal, Haoqi Sun, Balaji Goparaju, M. Brandon Westover, Jimeng Sun, Matt T. Bianchi
2018 J jnl
HAMLET: Interpretable Human And Machine co-LEarning Technique.
CoRR
Olivier Deiss, Siddharth Biswal, Jing Jin, Haoqi Sun, M. Brandon Westover, Jimeng Sun
2018 C conf
Predicting Ordinal Level of Sedation from the Spectrogram of Electroencephalography.
CW
Haoqi Sun, Sunil Belur Nagaraj, M. Brandon Westover
2018 — conf
You Snooze, You Win: The PhysioNet/Computing in Cardiology Challenge 2018.
CinC
Mohammad M. Ghassemi, Benjamin Moody, Li-Wei H. Lehman, Christopher Song, Qiao Li, Haoqi Sun, M. Brandon Westover, Gari D. Clifford
2017 B conf
Mobile EEG-based situation awareness recognition for air traffic controllers.
SMC
Lee Guan Yeo, Haoqi Sun, Yisi Liu, Fitri Trapsilawati, Olga Sourina, Chun-Hsien Chen, Wolfgang Müller-Wittig, Wei Tech Ang
2017 J jnl
SLEEPNET: Automated Sleep Staging System via Deep Learning.
CoRR
Siddharth Biswal, Joshua Kulas, Haoqi Sun, Balaji Goparaju, M. Brandon Westover, Matt T. Bianchi, Jimeng Sun
2016 J jnl
Learning Polychronous Neuronal Groups Using Joint Weight-Delay Spike-Timing-Dependent Plasticity.
Neural Comput.
Haoqi Sun, Olga Sourina, Guang-Bin Huang
2015 C conf
Estimating vigilance from EEG using manifold clustering guided by instantaneous lapse rate.
ICICS
Haoqi Sun, Yan Yang, Olga Sourina, Guang-Bin Huang, Felix Klanner, Cornelia Denk, Ralph H. Rasshofer
2015 B conf
Runtime detection of activated polychronous neuronal group towards its spatiotemporal analysis.
IJCNN
Haoqi Sun, Yan Yang, Olga Sourina, Guang-Bin Huang
2014 J jnl
iPEAP: integrating multiple omics and genetic data for pathway enrichment analysis.
Bioinform.
Haoqi Sun, Haiping Wang, Ruixin Zhu, Kailin Tang, Qin Gong, Juan Cui, Zhiwei Cao, Qi Liu