Hanspeter Herzel

40 papers C 1Journal 27Unranked 12

Year	Rank	Type	Title / Venue / Authors
2019	J	`jnl`	Weak coupling between intracellular feedback loops explains dissociation of clock gene dynamics. PLoS Comput. Biol. Christoph Schmal, Daisuke Ono, Jihwan Myung, J. Patrick Pett, Sato Honma, Ken-ichi Honma, Hanspeter Herzel, Isao T. Tokuda
2018	J	`jnl`	Coherency of circadian rhythms in the SCN is governed by the interplay of two coupling factors. PLoS Comput. Biol. Isao T. Tokuda, Daisuke Ono, Sato Honma, Ken-ichi Honma, Hanspeter Herzel
2017	J	`jnl`	Moran's I quantifies spatio-temporal pattern formation in neural imaging data. Bioinform. Christoph Schmal, Jihwan Myung, Hanspeter Herzel, Grigory V. Bordyugov
2016	J	`jnl`	Feedback Loops of the Mammalian Circadian Clock Constitute Repressilator. PLoS Comput. Biol. J. Patrick Pett, Anja Korencic, Felix Wesener, Achim Kramer, Hanspeter Herzel
2015	J	`jnl`	Mining for novel candidate clock genes in the circadian regulatory network. BMC Syst. Biol. Anuprabha Bhargava, Hanspeter Herzel, Bharath Ananthasubramaniam
2014	J	`jnl`	Elucidating the adaptation and temporal coordination of metabolic pathways using in-silico evolution. Biosyst. Willi Gottstein, Stefan Müller, Hanspeter Herzel, Ralf Steuer
2014	J	`jnl`	Timing of Neuropeptide Coupling Determines Synchrony and Entrainment in the Mammalian Circadian Clock. PLoS Comput. Biol. Bharath Ananthasubramaniam, Erik D. Herzog, Hanspeter Herzel
2011	J	`jnl`	Tuning the Mammalian Circadian Clock: Robust Synergy of Two Loops. PLoS Comput. Biol. Angela Relógio, Pål O. Westermark, Thomas Wallach, Katja Schellenberg, Achim Kramer, Hanspeter Herzel
2010	J	`jnl`	Tumor Growth Rate Determines the Timing of Optimal Chronomodulated Treatment Schedules. PLoS Comput. Biol. Samuel Bernard, Branka Cajavec Bernard, Francis Lévi, Hanspeter Herzel
2009	J	`jnl`	Quantification of Circadian Rhythms in Single Cells. PLoS Comput. Biol. Pål O. Westermark, David K. Welsh, Hitoshi Okamura, Hanspeter Herzel
2008	J	`jnl`	Are we overestimating the number of cell-cycling genes? The impact of background models on time-series analysis. Bioinform. Matthias E. Futschik, Hanspeter Herzel
2008	J	`jnl`	Global parameter search reveals design principles of the mammalian circadian clock. BMC Syst. Biol. James C. W. Locke, Pål O. Westermark, Achim Kramer, Hanspeter Herzel
2007	—	`conf`	Are we Overestimating the Number of Cell-Cycling Genes? The Impact of Background Models. German Conference on Bioinformatics Matthias E. Futschik, Hanspeter Herzel
2007	J	`jnl`	Comparison of human protein-protein interaction maps. Bioinform. Matthias E. Futschik, Gautam Chaurasia, Hanspeter Herzel
2007	J	`jnl`	Flexible web-based integration of distributed large-scale human protein interaction maps. J. Integr. Bioinform. Gautam Chaurasia, Yasir Iqbal, Christian Hänig, Hanspeter Herzel, Erich E. Wanker, Matthias E. Futschik
2007	J	`jnl`	Functional and Transcriptional Coherency of Modules in the Human Protein Interaction Network . J. Integr. Bioinform. Matthias E. Futschik, Gautam Chaurasia, Anna Tschaut, Jenny Russ, M. Madan Babu, Hanspeter Herzel
2007	J	`jnl`	Synchronization-Induced Rhythmicity of Circadian Oscillators in the Suprachiasmatic Nucleus. PLoS Comput. Biol. Samuel Bernard, Didier Gonze, Branka Cajavec, Hanspeter Herzel, Achim Kramer
2007	J	`jnl`	UniHI: an entry gate to the human protein interactome. Nucleic Acids Res. Gautam Chaurasia, Yasir Iqbal, Christian Hänig, Hanspeter Herzel, Erich E. Wanker, Matthias E. Futschik
2006	—	`conf`	Comparison of Human Protein-Protein Interaction Maps. German Conference on Bioinformatics Matthias E. Futschik, Gautam Chaurasia, Erich E. Wanker, Hanspeter Herzel
2006	J	`jnl`	DNA Motifs and Sequence Periodicities. Silico Biol. Lokesh Kumar, Matthias E. Futschik, Hanspeter Herzel
2006	J	`jnl`	Mathematical Modeling Identifies Inhibitors of Apoptosis as Mediators of Positive Feedback and Bistability. PLoS Comput. Biol. Stefan Legewie, Nils Blüthgen, Hanspeter Herzel
2005	J	`jnl`	HuSiDa - the human siRNA database: an open-access database for published functional siRNA sequences and technical details of efficient transfer into recipient cells. Nucleic Acids Res. Matthias Truss, Maciej Swat, Szymon M. Kielbasa, Reinhold Schäfer, Hanspeter Herzel, Christian Hagemeier
2005	J	`jnl`	Measuring similarities between transcription factor binding sites. BMC Bioinform. Szymon M. Kielbasa, Didier Gonze, Hanspeter Herzel
2005	—	`conf`	Two-mass models of the bird syrinx. MAVEBA Riccardo Zaccarelli, Coen Elemans, W. Tecumseh Fitch, Hanspeter Herzel
2005	J	`jnl`	Ultrasensitization: Switch-Like Regulation of Cellular Signaling by Transcriptional Induction. PLoS Comput. Biol. Stefan Legewie, Nils Blüthgen, Reinhold Schäfer, Hanspeter Herzel
2004	J	`jnl`	Bifurcation analysis of the regulatory modules of the mammalian G1/S transition. Bioinform. Maciej Swat, Alexander E. Kel, Hanspeter Herzel
2004	—	`conf`	Genome-wide Analysis of Functions Regulated by Sets of Transcription Factors. German Conference on Bioinformatics Szymon M. Kielbasa, Nils Blüthgen, Hanspeter Herzel
2004	J	`jnl`	HOMGL - comparing genelists across species and with different accession numbers. Bioinform. Nils Blüthgen, Szymon M. Kielbasa, Branka Cajavec, Hanspeter Herzel
2003	—	`conf`	Modeling the G1/S transition in mammals -Bifurcation an alysis of elementary modules. German Conference on Bioinformatics Maciej Swat, Alexander E. Kel, Szymon M. Kielbasa, Hanspeter Herzel
2003	C	`conf`	Optimizing Property Codes in Protein Data Reveals Structural Characteristics. ICANN Olaf Weiss, Andreas Ziehe, Hanspeter Herzel
2001	J	`jnl`	Combining frequency and positional information to predict transcription factor binding sites. Bioinform. Szymon M. Kielbasa, Jan O. Korbel, Dieter Beule, Johannes Schuchhardt, Hanspeter Herzel
2000	—	`conf`	Finding Transcription Factor Binding Sites in Coregulated Genes by Exhaustive Sequence Search. German Conference on Bioinformatics Szymon M. Kielbasa, Jan O. Korbel, Dieter Beule, Johannes Schuchhardt, Hanspeter Herzel
2000	—	`conf`	Peptide Binding Landscapes. German Conference on Bioinformatics Johannes Schuchhardt, Liying Dong, Ulrich Hoffmüller, Achim Kramer, Jens Schneider-Mergener, Hanspeter Herzel
2000	—	`conf`	Reliability of Microarray Data and Clustering. German Conference on Bioinformatics Dieter Beule, Johannes Schuchhardt, Arif Malik, Holger Eickhoff, Hans Lehrach, Hanspeter Herzel
1999	J	`jnl`	10-11 bp periodicities in complete genomes reflect protein structure and DNA folding. Bioinform. Hanspeter Herzel, Olaf Weiss, Edward N. Trifonov
1999	—	`conf`	Mutual Information Analysis of Surrogate Gene Expression Data. German Conference on Bioinformatics Dirk Holste, Dieter Beule, Wolfram Liebermeister, Johannes Schuchhardt, Hanspeter Herzel
1998	—	`conf`	Property Codes in Sets of Protein Sequences. German Conference on Bioinformatics Olaf Weiss, Hanspeter Herzel
1998	—	`conf`	Sequence Periodicities in Complete Genomes Reflect Supercoiling. German Conference on Bioinformatics Hanspeter Herzel, Olaf Weiss, Edward N. Trifonov
1997	J	`jnl`	Modelling biphonation - The role of the vocal tract. Speech Commun. Patrick Mergell, Hanspeter Herzel
1991	—	`conf`	Evidence of chaos in phonatory samples. EUROSPEECH Hanspeter Herzel, J. Wendler