Hannes L. Röst

14 papers Journal 13
YearRankTypeTitle / Venue / Authors
2026 J jnl
RISK: a next-generation tool for biological network annotation and visualization.
Bioinform.
Ira Horecka, Hannes L. Röst
2024 J jnl
FraGNNet: A Deep Probabilistic Model for Mass Spectrum Prediction.
CoRR
Adamo Young, Fei Wang, David S. Wishart, Bo Wang, Hannes L. Röst, Russ Greiner
2024 J jnl
OpenMS WebApps: Building User-Friendly Solutions for MS Analysis.
CoRR
Tom David Müller, Arslan Siraj, Axel Walter, Jihyung Kim, Samuel Wein, Johannes von Kleist, Ayesha Feroz, Matteo Pilz, Kyowon Jeong, Justin Cyril Sing, Joshua Charkow, Hannes L. Röst, Timo Sachsenberg
2024 J jnl
Tandem mass spectrum prediction for small molecules using graph transformers.
Nat. Mac. Intell.
Adamo Young, Hannes L. Röst, Bo Wang
2021 J jnl
MassFormer: Tandem Mass Spectrum Prediction with Graph Transformers.
CoRR
Adamo Young, Bo Wang, Hannes L. Röst
2021 J jnl
mspack: efficient lossless and lossy mass spectrometry data compression.
Bioinform.
Felix Hanau, Hannes L. Röst, Idoia Ochoa
2020 J jnl
Peak Detection On Data Independent Acquisition Mass Spectrometry Data With Semisupervised Convolutional Transformers.
CoRR
Leon L. Xu, Hannes L. Röst
2018 J jnl
Recommendations for the packaging and containerizing of bioinformatics software.
F1000Research
Björn A. Grüning, Olivier Sallou, Pablo A. Moreno, Felipe da Veiga Leprevost, Hervé Ménager, Dan Søndergaard, Hannes L. Röst, Timo Sachsenberg, Brian O'Connor, Fábio Madeira, Victoria Dominguez Del Angel, Michael R. Crusoe, Susheel Varma, Daniel J. Blankenberg, Rafael C. Jiménez, Daniel Blankenberg, Yasset Pérez-Riverol
2017 J jnl
BioContainers: an open-source and community-driven framework for software standardization.
Bioinform.
Felipe da Veiga Leprevost, Björn A. Grüning, Saulo Aflitos, Hannes L. Röst, Julian Uszkoreit, Harald Barsnes, Marc Vaudel, Pablo A. Moreno, Laurent Gatto, Jonas Weber, Mingze Bai, Rafael C. Jiménez, Timo Sachsenberg, Julianus Pfeuffer, Roberto Vera Alvarez, Johannes Griss, Alexey I. Nesvizhskii, Yasset Pérez-Riverol
2016 — ch.
Chapter 10. Data Analysis for Data Independent Acquisition.
Proteome Informatics
Pedro Navarro, Marco Trevisan-Herraz, Hannes L. Röst
2015 J jnl
DIANA - algorithmic improvements for analysis of data-independent acquisition MS data.
Bioinform.
Johan Teleman, Hannes L. Röst, George Rosenberger, Uwe Schmitt, Lars Malmström, Johan Malmström, Fredrik Levander
2015 J jnl
Efficient visualization of high-throughput targeted proteomics experiments: TAPIR.
Bioinform.
Hannes L. Röst, George Rosenberger, Ruedi Aebersold, Lars Malmström
2015 J jnl
Statistical elimination of spectral features with large between-run variation enhances quantitative protein-level conclusions in experiments with data-independent spectral acquisition.
BMC Bioinform.
Lin-Yang Cheng, Yansheng Liu, Ching-Yun Chang, Hannes L. Röst, Ruedi Aebersold, Olga Vitek
2014 J jnl
aLFQ: an R-package for estimating absolute protein quantities from label-free LC-MS/MS proteomics data.
Bioinform.
George Rosenberger, Christina Ludwig, Hannes L. Röst, Ruedi Aebersold, Lars Malmström