Han Wang

27 papers A* 1A 1B 1Journal 24
YearRankTypeTitle / Venue / Authors
2026 J jnl
CoRR
Yuzhi Liu, Duo Zhang, Anyang Peng, Weinan E, Linfeng Zhang, Han Wang
2025 J jnl
J. Chem. Inf. Model.
Fengbo Yuan, Zhaohan Ding, Yun-Pei Liu, Kai Cao, Jiahao Fan, Cao Thang Nguyen, Yuzhi Zhang, Haidi Wang, Yixiao Chen, Jiameng Huang, Tongqi Wen, Mingkang Liu, Yifan Li, Yong-Bin Zhuang, Hao Yu, Ping Tuo, Yaotang Zhang, Yibo Wang, Linfeng Zhang, Han Wang, Jinzhe Zeng
2025 J jnl
J. Chem. Inf. Model.
Jinzhe Zeng, Timothy J. Giese, Duo Zhang, Han Wang, Darrin M. York
2025 J jnl
CoRR
Anyang Peng, Xinzijian Liu, Ming-Yu Guo, Linfeng Zhang, Han Wang
2025 J jnl
Mach. Learn. Sci. Technol.
Anyang Peng, Xinzijian Liu, Ming-Yu Guo, Linfeng Zhang, Han Wang
2025 J jnl
J. Chem. Inf. Model.
Jinzhe Zeng, Xingliang Peng, Yong-Bin Zhuang, Haidi Wang, Fengbo Yuan, Duo Zhang, Renxi Liu, Yingze Wang, Ping Tuo, Yuzhi Zhang, Yixiao Chen, Yifan Li, Cao Thang Nguyen, Jiameng Huang, Anyang Peng, Marián Rynik, Wei-Hong Xu, Zezhong Zhang, Xu-Yuan Zhou, Tao Chen, Jiahao Fan, Wanrun Jiang, Bowen Li, Denan Li, Haoxi Li, Wenshuo Liang, Ruihao Liao, Liping Liu, Chenxing Luo, Logan Ward, Kaiwei Wan, Junjie Wang, Pan Xiang, Chengqian Zhang, Jinchao Zhang, Rui Zhou, Jia-Xin Zhu, Linfeng Zhang, Han Wang
2024 J jnl
CoRR
Xinzijian Liu, Yanbo Han, Zhuoyuan Li, Jiahao Fan, Chengqian Zhang, Jinzhe Zeng, Yifan Shan, Yannan Yuan, Wei-Hong Xu, Yun-Pei Liu, Yuzhi Zhang, Tongqi Wen, Darrin M. York, Zhicheng Zhong, Hang Zheng, Jun Cheng, Linfeng Zhang, Han Wang
2023 J jnl
Comput. Phys. Commun.
Yixiao Chen, Linfeng Zhang, Han Wang, Weinan E
2022 J jnl
CoRR
Hao Xie, Zi-Hang Li, Han Wang, Linfeng Zhang, Lei Wang
2022 J jnl
CoRR
Duo Zhang, Hangrui Bi, Fu-Zhi Dai, Wanrun Jiang, Linfeng Zhang, Han Wang
2022 J jnl
CoRR
Wenfei Li, Qi Ou, Yixiao Chen, Yu Cao, Renxi Liu, Chunyi Zhang, Daye Zheng, Chun Cai, Xifan Wu, Han Wang, Mohan Chen, Linfeng Zhang
2022 J jnl
Nat. Comput. Sci.
Dongdong Wang, Yanze Wang, Junhan Chang, Linfeng Zhang, Han Wang, Weinan E
2022 B conf
PPoPP
Zhuoqiang Guo, Denghui Lu, Yujin Yan, Siyu Hu, Rongrong Liu, Guangming Tan, Ninghui Sun, Wanrun Jiang, Lijun Liu, Yixiao Chen, Linfeng Zhang, Mohan Chen, Han Wang, Weile Jia
2022 J jnl
CoRR
Zhuoqiang Guo, Denghui Lu, Yujin Yan, Siyu Hu, Rongrong Liu, Guangming Tan, Ninghui Sun, Wanrun Jiang, Lijun Liu, Yixiao Chen, Linfeng Zhang, Mohan Chen, Han Wang, Weile Jia
2021 J jnl
Comput. Phys. Commun.
Denghui Lu, Han Wang, Mohan Chen, Lin Lin, Roberto Car, Weinan E, Weile Jia, Linfeng Zhang
2020 J jnl
CoRR
Denghui Lu, Han Wang, Mohan Chen, Jiduan Liu, Lin Lin, Roberto Car, Weinan E, Weile Jia, Linfeng Zhang
2020 J jnl
Comput. Phys. Commun.
Yuzhi Zhang, Haidi Wang, Weijie Chen, Jinzhe Zeng, Linfeng Zhang, Han Wang, Weinan E
2020 J jnl
CoRR
Yixiao Chen, Linfeng Zhang, Han Wang, Weinan E
2020 A conf
SC
Weile Jia, Han Wang, Mohan Chen, Denghui Lu, Lin Lin, Roberto Car, Weinan E, Linfeng Zhang
2018 J jnl
CoRR
Linfeng Zhang, De-Ye Lin, Han Wang, Roberto Car, Weinan E
2018 J jnl
Comput. Phys. Commun.
Han Wang, Linfeng Zhang, Jiequn Han, Weinan E
2018 A* conf
NeurIPS
Linfeng Zhang, Jiequn Han, Han Wang, Wissam Saidi, Roberto Car, Weinan E
2017 J jnl
CoRR
Han Wang, Linfeng Zhang, Jiequn Han, Weinan E
2017 J jnl
CoRR
Linfeng Zhang, Jiequn Han, Han Wang, Roberto Car, Weinan E
2017 J jnl
Comput. Phys. Commun.
Xingyu Gao, Zeyao Mo, Jun Fang, Haifeng Song, Han Wang
2017 J jnl
CoRR
Linfeng Zhang, Han Wang, Weinan E
2007 J jnl
J. Comput. Phys.
Han Wang, Huazhong Tang
redb/extractors/pe_extractors/pe_signature.py
← Index redb/extractors/pe_extractors/pe_signature.py python
import inspect
import yara_x
from datetime import datetime, timezone
from signify.authenticode import SignedPEFile
from typing import Any, Dict, List, Tuple

from redb.extractors.enum import Tag
from redb.extractors.pe_extractor import PEExtractor
from redb.models.dataclasses import PECertificate, PESigner, PECodeSigningInfo


class PESignatureExtractor(PEExtractor):
    """
    RFC 3161 - Internet X.509 Public Key Infrastructure Time-Stamp Protocol (TSP)
    Section 2.4.2 defines the TSTInfo structure.
    https://tools.ietf.org/html/rfc3161#section-2.4.2

    Microsoft Authenticode Time Stamping Specification
    https://download.microsoft.com/download/9/c/5/9c5b2167-8017-4bae-9fde-d599bac8184a/Authenticode_PE.docx
    """

    def __init__(
        self,
        filepath,
        log,
        exporters=None,
        index_prefix=None,
        elastic_index=None,
        known_benign=False,
        known_malicious=False,
        pe=None,
    ):
        super().__init__(
            filepath,
            log,
            exporters,
            index_prefix,
            elastic_index,
            known_benign,
            known_malicious,
            pe,
        )
        self.elastic_index = self.index_prefix + "-pe_signature"
        self.log.debug(inspect.currentframe().f_code.co_name)
        self.code_signing_info = None

    def tag(self):
        return [Tag.PE_CERTIFICATE.value, Tag.PE_SIGNER.value, Tag.PE_SIGNATURE.value]

    def _extract_certificate_info(self, certificate):
        self.log.debug(inspect.currentframe().f_code.co_name)

        # YARA-X returns datetime objects directly, not Unix timestamps
        not_before = certificate["not_before"]
        not_after = certificate["not_after"]

        # Handle both datetime objects and Unix timestamps for compatibility
        if isinstance(not_before, datetime):
            valid_from = not_before.strftime("%Y-%m-%d %H:%M:%S")
        else:
            valid_from = datetime.fromtimestamp(int(not_before), timezone.utc).strftime("%Y-%m-%d %H:%M:%S")

        if isinstance(not_after, datetime):
            valid_to = not_after.strftime("%Y-%m-%d %H:%M:%S")
        else:
            valid_to = datetime.fromtimestamp(int(not_after), timezone.utc).strftime("%Y-%m-%d %H:%M:%S")

        return PECertificate(
            certificate_serial_number=certificate["serial"],
            certificate_subject=certificate["subject"],
            certificate_issuer=certificate["issuer"],
            certificate_valid_from=valid_from,
            certificate_valid_to=valid_to,
            certificate_thumbprint=certificate["thumbprint"].upper(),
            certificate_algorithm=certificate["algorithm"],
        )

    def _extract_signer_info(self, signer):
        self.log.debug(inspect.currentframe().f_code.co_name)

        # YARA-X returns datetime objects directly, not Unix timestamps
        not_before = signer["not_before"]
        not_after = signer["not_after"]

        # Handle both datetime objects and Unix timestamps for compatibility
        if isinstance(not_before, datetime):
            valid_from = not_before.strftime("%Y-%m-%d %H:%M:%S")
        else:
            valid_from = datetime.fromtimestamp(int(not_before), timezone.utc).strftime("%Y-%m-%d %H:%M:%S")

        if isinstance(not_after, datetime):
            valid_to = not_after.strftime("%Y-%m-%d %H:%M:%S")
        else:
            valid_to = datetime.fromtimestamp(int(not_after), timezone.utc).strftime("%Y-%m-%d %H:%M:%S")

        return PESigner(
            signer_serial_number=signer["serial"],
            signer_subject=signer["subject"],
            signer_issuer=signer["issuer"],
            signer_valid_from=valid_from,
            signer_valid_to=valid_to,
            signer_thumbprint=signer["thumbprint"].upper(),
            signer_algorithm=signer["algorithm"],
        )

    def _extract_signature_info(self):
        self.log.debug(inspect.currentframe().f_code.co_name)
        pe_rules = """
            import "pe"
            rule is_pe {
                condition: 
                    pe.is_pe
            }
        """
        rule = yara_x.compile(pe_rules)
        results = rule.scan(self.binary)
        yara_output = results.module_outputs

        signature_info = yara_output["pe"]["signatures"][0]
        number_of_certificates = signature_info["number_of_certificates"]
        signature_verified = signature_info["verified"]
        self.code_signing_info = PECodeSigningInfo(
            _id=self.sha256,
            signature_verified=signature_verified,
            number_of_certificates=int(number_of_certificates),
        )

        keys = signature_info.keys()
        if "certificates" in keys:
            self.log.debug("Extracting PE Signing Certificates")
            certificates = signature_info["certificates"]
            certificates_list = []
            for cert in certificates:
                cert_info = self._extract_certificate_info(cert)
                certificates_list.append(cert_info)
            self.code_signing_info.x509_certificates = certificates_list

        if "signer_info" in keys:
            self.log.debug("Extracting PE Signing Signer Info")
            signers = signature_info["signer_info"]["chain"]
            signers_list = []
            for signer in signers:
                sig = self._extract_signer_info(signer)
                signers_list.append(sig)
            self.code_signing_info.signers = signers_list

        if "countersignatures" in keys:
            self.log.debug("Extracting PE Signing Countersignatures")
            countersignatures = signature_info["countersignatures"][0]["chain"]
            countersigners_list = []
            for csigner in countersignatures:
                csig = self._extract_signer_info(csigner)
                countersigners_list.append(csig)
            self.code_signing_info.countersigners = countersigners_list

        with open(self.filepath, "rb") as f:
            self.log.debug("Extracting PE Signing spcSpOpusInfo")
            sig_pefile = SignedPEFile(f)
            try:
                spc_opusinfo = {}
                for signed_data in sig_pefile.signed_datas:
                    spc_opusinfo["ProgramName"] = signed_data.signer_info.program_name
                    spc_opusinfo["MoreInfo"] = signed_data.signer_info.more_info
                    self.code_signing_info.spcSpOpusInfo = spc_opusinfo

                    if signed_data.signer_info.countersigner is not None:
                        stime = signed_data.signer_info.countersigner.signing_time
                        self.code_signing_info.date_signed = stime.strftime(
                            "%Y-%m-%d %H:%M:%S"
                        )
            except Exception as e:
                self.log.error(
                    f"Error while extracting spcSpOpusInfo or signing date: {e}"
                )

    def extract(self):
        try:
            self.log.debug(inspect.currentframe().f_code.co_name)
            if self._is_signed():
                self._extract_signature_info()
                # self.export_to_elastic([self.code_signing_info])
                return self.code_signing_info
            return None
        except Exception as e:
            self.log.error(f"Error extracting PE Signature: {e}")
            return None

    # def prepare_export_data(self, exporter_type: str) -> Any:
    #     self.log.debug(inspect.currentframe().f_code.co_name)
    #     if exporter_type == "ElasticsearchExporter":
    #         return self.extract()
    #     elif exporter_type == "ClickHouseExporter":
    #         signing_info = self.extract()
    #         if signing_info is None:
    #             return None
                
    #         current_time = datetime.now(timezone.utc)
            
    #         # Prepare data for redb_pe_signatures table
    #         signatures_data = [[
    #             self.sha256,                                    # sha256
    #             self.md5,                                       # md5
    #             self.sha1,                                      # sha1
    #             signing_info.signature_verified,                # signature_verified
    #             datetime.strptime(signing_info.date_signed, "%Y-%m-%d %H:%M:%S") if signing_info.date_signed else None,  # date_signed
    #             signing_info.number_of_certificates,            # number_of_certificates
    #             signing_info.spcSpOpusInfo.get('ProgramName', None) if signing_info.spcSpOpusInfo else None,  # program_name
    #             signing_info.spcSpOpusInfo.get('MoreInfo', None) if signing_info.spcSpOpusInfo else None,    # more_info
    #             current_time                                    # analysis_date
    #         ]]

    #         certificates_data = []
            
    #         # Process signers
    #         if signing_info.signers:
    #             for signer in signing_info.signers:
    #                 certificates_data.append(self._prepare_certificate_data(signer, 'signer', current_time))
            
    #         # Process countersigners
    #         if signing_info.countersigners:
    #             for csigner in signing_info.countersigners:
    #                 certificates_data.append(self._prepare_certificate_data(csigner, 'countersigner', current_time))
            
    #         # Process x509 certificates
    #         if signing_info.x509_certificates:
    #             for cert in signing_info.x509_certificates:
    #                 certificates_data.append(self._prepare_certificate_data(cert, 'chain', current_time))
            
    #         return {
    #             'multi_table': True,
    #             'signatures': {
    #                 'table': 'redb_pe_signatures',
    #                 'data': signatures_data,
    #                 'column_names': [
    #                     'sha256', 'md5', 'sha1', 'signature_verified', 'date_signed',
    #                     'number_of_certificates', 'spcSpOpusInfo_program_name', 'spcSpOpusInfo_more_info', 'analysis_date'
    #                 ],
    #                 'column_type_names': [
    #                     'FixedString(64)', 'FixedString(32)', 'FixedString(40)',
    #                     'Boolean', 'DateTime64(3, \'UTC\')', 'UInt8',
    #                     'Nullable(String)', 'Nullable(String)', 'DateTime64(3, \'UTC\')'
    #                 ]
    #             },
    #             'certificates': {
    #                 'table': 'redb_pe_certificates',
    #                 'data': certificates_data,
    #                 'column_names': [
    #                     'sha256', 'md5', 'sha1', 'certificate_type', 'certificate_algorithm',
    #                     'certificate_issuer', 'certificate_subject', 'certificate_serial_number',
    #                     'certificate_thumbprint', 'certificate_valid_from', 'certificate_valid_to',
    #                     'analysis_date'
    #                 ],
    #                 'column_type_names': [
    #                     'FixedString(64)', 'FixedString(32)', 'FixedString(40)',
    #                     'Enum(\'signer\', \'countersigner\', \'chain\')', 'LowCardinality(String)',
    #                     'LowCardinality(String)', 'LowCardinality(String)', 'String',
    #                     'String', 'DateTime64(3, \'UTC\')', 'DateTime64(3, \'UTC\')',
    #                     'DateTime64(3, \'UTC\')'
    #                 ]
    #             }
    #         }

    # def _prepare_certificate_data(self, cert, cert_type: str, analysis_time: datetime) -> List:
    #     """Helper method to prepare certificate data for ClickHouse"""
    #     self.log.debug(inspect.currentframe().f_code.co_name)
    #     prefix = "certificate_" if hasattr(cert, "certificate_algorithm") else "signer_"
        
    #     # Get serial number and clean it up
    #     serial_number = getattr(cert, f"{prefix}serial_number")
    #     if serial_number:
    #         serial_number = serial_number.replace(':', '')
        
    #     return [
    #         self.sha256,                          # sha256
    #         self.md5,                             # md5
    #         self.sha1,                            # sha1
    #         cert_type,                            # certificate_type
    #         getattr(cert, f"{prefix}algorithm"),   # certificate_algorithm
    #         getattr(cert, f"{prefix}issuer"),     # certificate_issuer
    #         getattr(cert, f"{prefix}subject"),    # certificate_subject
    #         serial_number,                        # certificate_serial_number
    #         getattr(cert, f"{prefix}thumbprint"),  # certificate_thumbprint
    #         datetime.strptime(getattr(cert, f"{prefix}valid_from"), "%Y-%m-%d %H:%M:%S"),  # certificate_valid_from
    #         datetime.strptime(getattr(cert, f"{prefix}valid_to"), "%Y-%m-%d %H:%M:%S"),    # certificate_valid_to
    #         analysis_time                         # analysis_date
    #     ]
    def prepare_export_data(self, exporter_type: str) -> Any:
        self.log.debug(inspect.currentframe().f_code.co_name)
        if exporter_type == "ElasticsearchExporter":
            return self.extract()
        elif exporter_type == "ClickHouseExporter":
            signing_info = self.extract()
            if signing_info is None:
                return None
                
            current_time = datetime.now(timezone.utc)
            
            # Prepare data for redb_pe_signatures table
            signatures_data = [[
                self.sha256,                                    # sha256
                self.md5,                                       # md5
                self.sha1,                                      # sha1
                signing_info.signature_verified,                # signature_verified
                datetime.strptime(signing_info.date_signed, "%Y-%m-%d %H:%M:%S") if signing_info.date_signed else None,  # date_signed
                signing_info.number_of_certificates,            # number_of_certificates
                signing_info.spcSpOpusInfo.get('ProgramName', None) if signing_info.spcSpOpusInfo else None,  # program_name
                signing_info.spcSpOpusInfo.get('MoreInfo', None) if signing_info.spcSpOpusInfo else None,    # more_info
                current_time                                    # analysis_date
            ]]

            # Prepare data for redb_pe_certificates table
            certificates_data = []
            
            # Process signers
            if signing_info.signers:
                for signer in signing_info.signers:
                    certificates_data.append(self._prepare_certificate_data(signer, 'signer', current_time))
            
            # Process countersigners
            if signing_info.countersigners:
                for csigner in signing_info.countersigners:
                    certificates_data.append(self._prepare_certificate_data(csigner, 'countersigner', current_time))
            
            # Process x509 certificates
            if signing_info.x509_certificates:
                for cert in signing_info.x509_certificates:
                    certificates_data.append(self._prepare_certificate_data(cert, 'chain', current_time))
            
            return {
                'multi_table': True,
                'signatures': {
                    'table': 'redb_pe_signatures',
                    'data': signatures_data,
                    'column_names': [
                        'sha256', 'md5', 'sha1', 'signature_verified', 'date_signed',
                        'number_of_certificates', 'spcSpOpusInfo_program_name', 'spcSpOpusInfo_more_info', 'analysis_date'
                    ],
                    'column_type_names': [
                        'FixedString(64)', 'FixedString(32)', 'FixedString(40)',
                        'Boolean', 'DateTime64(3, \'UTC\')', 'UInt8',
                        'Nullable(String)', 'Nullable(String)', 'DateTime64(3, \'UTC\')'
                    ]
                },
                'certificates': {
                    'table': 'redb_pe_certificates',
                    'data': certificates_data,
                    'column_names': [
                        'sha256', 'md5', 'sha1', 'certificate_type', 'certificate_algorithm',
                        'certificate_issuer', 'certificate_subject', 'certificate_serial_number',
                        'certificate_thumbprint', 'certificate_valid_from', 'certificate_valid_to',
                        'analysis_date'
                    ],
                    'column_type_names': [
                        'FixedString(64)', 'FixedString(32)', 'FixedString(40)',
                        'Enum8(\'signer\' = 1, \'countersigner\' = 2, \'chain\' = 3)', 'LowCardinality(String)',
                        'LowCardinality(String)', 'LowCardinality(String)', 'String',
                        'String', 'DateTime64(3, \'UTC\')', 'DateTime64(3, \'UTC\')',
                        'DateTime64(3, \'UTC\')'
                    ]
                }
            }

    # def _prepare_certificate_data(self, cert, cert_type: str, analysis_time: datetime) -> List:
    #     """Helper method to prepare certificate data for ClickHouse"""
    #     self.log.debug(inspect.currentframe().f_code.co_name)
    #     prefix = "certificate_" if hasattr(cert, "certificate_algorithm") else "signer_"
        
    #     # Get serial number and clean it up - with strict handling
    #     serial_number = getattr(cert, f"{prefix}serial_number", "UNKNOWN")
    #     if not serial_number or not str(serial_number).strip():
    #         serial_number = "UNKNOWN"
    #     else:
    #         serial_number = serial_number.replace(':', '')
    #         if not serial_number.strip():  # Double check after cleaning
    #             serial_number = "UNKNOWN"
        
    #     return [
    #         self.sha256,                          # sha256
    #         self.md5,                             # md5
    #         self.sha1,                            # sha1
    #         cert_type,                            # certificate_type
    #         getattr(cert, f"{prefix}algorithm"),   # certificate_algorithm
    #         getattr(cert, f"{prefix}issuer"),     # certificate_issuer
    #         getattr(cert, f"{prefix}subject"),    # certificate_subject
    #         serial_number,                        # certificate_serial_number
    #         getattr(cert, f"{prefix}thumbprint"),  # certificate_thumbprint
    #         datetime.strptime(getattr(cert, f"{prefix}valid_from"), "%Y-%m-%d %H:%M:%S"),  # certificate_valid_from
    #         datetime.strptime(getattr(cert, f"{prefix}valid_to"), "%Y-%m-%d %H:%M:%S"),    # certificate_valid_to
    #         analysis_time                         # analysis_date
    #     ]

    def _prepare_certificate_data(self, cert, cert_type: str, analysis_time: datetime) -> List:
        """Helper method to prepare certificate data for ClickHouse"""
        self.log.debug(inspect.currentframe().f_code.co_name)
        prefix = "certificate_" if hasattr(cert, "certificate_algorithm") else "signer_"
        
        def clean_string(value, field_name):
            if value is None or (isinstance(value, str) and not value.strip()):
                self.log.warning(f"Empty or None value found for {field_name}")
                return "UNKNOWN"
            return str(value).strip()
        
        try:
            serial_number = getattr(cert, f"{prefix}serial_number", "UNKNOWN")
            serial_number = clean_string(serial_number, "serial_number")
            if serial_number != "UNKNOWN":
                serial_number = serial_number.replace(':', '')
        
            return [
                clean_string(self.sha256, "sha256"),
                clean_string(self.md5, "md5"),
                clean_string(self.sha1, "sha1"),
                cert_type,
                clean_string(getattr(cert, f"{prefix}algorithm"), "algorithm"),
                clean_string(getattr(cert, f"{prefix}issuer"), "issuer"),
                clean_string(getattr(cert, f"{prefix}subject"), "subject"),
                serial_number,
                clean_string(getattr(cert, f"{prefix}thumbprint"), "thumbprint"),
                datetime.strptime(getattr(cert, f"{prefix}valid_from"), "%Y-%m-%d %H:%M:%S"),
                datetime.strptime(getattr(cert, f"{prefix}valid_to"), "%Y-%m-%d %H:%M:%S"),
                analysis_time
            ]
        except Exception as e:
            self.log.error(f"Error preparing certificate data: {str(e)}")
            self.log.error(f"Certificate data that caused error: {cert}")
            raise

    def get_clickhouse_table(self) -> str:
        """Required by PEExtractor abstract base class"""
        return "redb_pe_signatures"  # Return the primary table

    def get_clickhouse_tables(self) -> Dict[str, str]:
        """Additional method for multi-table support"""
        return {
            'signatures': 'redb_pe_signatures',
            'certificates': 'redb_pe_certificates'
        }