Hamish McWilliam

25 papers Journal 25
YearRankTypeTitle / Venue / Authors
2015 J jnl
The EBI Search engine: providing search and retrieval functionality for biological data from EMBL-EBI.
Nucleic Acids Res.
Silvano Squizzato, Young Mi Park, Nicola Buso, Tamer Gur, Andrew Peter Cowley, Weizhong Li, Mahmut Uludag, Sangya Pundir, Jennifer A. Cham, Hamish McWilliam, Rodrigo Lopez
2015 J jnl
The EMBL-EBI bioinformatics web and programmatic tools framework.
Nucleic Acids Res.
Weizhong Li, Andrew Peter Cowley, Mahmut Uludag, Tamer Gur, Hamish McWilliam, Silvano Squizzato, Young Mi Park, Nicola Buso, Rodrigo Lopez
2014 J jnl
Assembly information services in the European Nucleotide Archive.
Nucleic Acids Res.
Nima Pakseresht, Blaise T. F. Alako, Clara Amid, Ana Cerdeño-Tárraga, Iain Cleland, Richard Gibson, Neil Goodgame, Tamer Gur, Mikyung Jang, Simon Kay, Rasko Leinonen, Weizhong Li, Xin Liu, Rodrigo Lopez, Hamish McWilliam, Arnaud Oisel, Swapna Pallreddy, Sheila Plaister, Rajesh Radhakrishnan, Stéphane Rivière, Marc Rossello, Alexander Senf, Nicole Silvester, Dimitriy Smirnov, Silvano Squizzato, Petra ten Hoopen, Ana Luisa Toribio, Daniel Vaughan, Vadim Zalunin, Guy Cochrane
2014 J jnl
InterProScan 5: genome-scale protein function classification.
Bioinform.
Philip Jones, David Binns, Hsin-Yu Chang, Matthew Fraser, Weizhong Li, Craig McAnulla, Hamish McWilliam, John Maslen, Alex L. Mitchell, Gift Nuka, Sebastien Pesseat, Antony F. Quinn, Amaia Sangrador-Vegas, Maxim Scheremetjew, Siew-Yit Yong, Rodrigo Lopez, Sarah Hunter
2013 J jnl
Analysis Tool Web Services from the EMBL-EBI.
Nucleic Acids Res.
Hamish McWilliam, Weizhong Li, Mahmut Uludag, Silvano Squizzato, Young Mi Park, Nicola Buso, Andrew Peter Cowley, Rodrigo Lopez
2013 J jnl
EDAM: an ontology of bioinformatics operations, types of data and identifiers, topics and formats.
Bioinform.
Jon C. Ison, Matús Kalas, Inge Jonassen, Dan M. Bolser, Mahmut Uludag, Hamish McWilliam, James Malone, Rodrigo Lopez, Steve Pettifer, Peter M. Rice
2013 J jnl
Facing growth in the European Nucleotide Archive.
Nucleic Acids Res.
Guy Cochrane, Blaise T. F. Alako, Clara Amid, Lawrence Bower, Ana Cerdeño-Tárraga, Iain Cleland, Richard Gibson, Neil Goodgame, Mikyung Jang, Simon Kay, Rasko Leinonen, Xiu Lin, Rodrigo Lopez, Hamish McWilliam, Arnaud Oisel, Nima Pakseresht, Swapna Pallreddy, Young Mi Park, Sheila Plaister, Rajesh Radhakrishnan, Stéphane Rivière, Marc Rossello, Alexander Senf, Nicole Silvester, Dimitriy Smirnov, Petra ten Hoopen, Ana Luisa Toribio, Daniel Vaughan, Vadim Zalunin
2013 J jnl
IPD - the Immuno Polymorphism Database.
Nucleic Acids Res.
James Robinson, Jason A. Halliwell, Hamish McWilliam, Rodrigo Lopez, Steven G. E. Marsh
2013 J jnl
The Annotation-enriched non-redundant patent sequence databases.
Database J. Biol. Databases Curation
Weizhong Li, Bartosz Kondratowicz, Hamish McWilliam, Stephane Nauche, Rodrigo Lopez
2013 J jnl
The IMGT/HLA database.
Nucleic Acids Res.
James Robinson, Jason A. Halliwell, Hamish McWilliam, Rodrigo Lopez, Peter Parham, Steven G. E. Marsh
2012 J jnl
PSI-Search: iterative HOE-reduced profile SSEARCH searching.
Bioinform.
Weizhong Li, Hamish McWilliam, Mickael Goujon, Andrew Peter Cowley, Rodrigo Lopez, William R. Pearson
2011 J jnl
The IMGT/HLA database.
Nucleic Acids Res.
James Robinson, Kavita Mistry, Hamish McWilliam, Rodrigo Lopez, Peter Parham, Steven G. E. Marsh
2010 J jnl
A new bioinformatics analysis tools framework at EMBL-EBI.
Nucleic Acids Res.
Mickael Goujon, Hamish McWilliam, Weizhong Li, Franck Valentin, Silvano Squizzato, Juri Paern, Rodrigo Lopez
2010 J jnl
Fast and efficient searching of biological data resources - using EB-eye.
Briefings Bioinform.
Franck Valentin, Silvano Squizzato, Mickael Goujon, Hamish McWilliam, Juri Paern, Rodrigo Lopez
2010 J jnl
IPD - the Immuno Polymorphism Database.
Nucleic Acids Res.
James Robinson, Kavita Mistry, Hamish McWilliam, Rodrigo Lopez, Steven G. E. Marsh
2010 J jnl
Improvements to services at the European Nucleotide Archive.
Nucleic Acids Res.
Rasko Leinonen, Ruth Akhtar, Ewan Birney, James K. Bonfield, Lawrence Bower, Matthew Corbett, Ying Cheng, Fehmi Demiralp, Nadeem Faruque, Neil Goodgame, Richard Gibson, Gemma Hoad, Christopher I. Hunter, Mikyung Jang, Steven Leonard, Quan Lin, Rodrigo Lopez, Michael Maguire, Hamish McWilliam, Sheila Plaister, Rajesh Radhakrishnan, Siamak Sobhany, Guy Slater, Petra ten Hoopen, Franck Valentin, Robert Vaughan, Vadim Zalunin, Daniel R. Zerbino, Guy Cochrane
2010 J jnl
Non-redundant patent sequence databases with value-added annotations at two levels.
Nucleic Acids Res.
Weizhong Li, Hamish McWilliam, Ana Richart de la Torre, Adam Grodowski, Irina Benediktovich, Mickael Goujon, Stephane Nauche, Rodrigo Lopez
2009 J jnl
Petabyte-scale innovations at the European Nucleotide Archive.
Nucleic Acids Res.
Guy Cochrane, Ruth Akhtar, James K. Bonfield, Lawrence Bower, Fehmi Demiralp, Nadeem Faruque, Richard Gibson, Gemma Hoad, Tim J. P. Hubbard, Christopher I. Hunter, Mikyung Jang, Szilveszter Juhos, Rasko Leinonen, Steven Leonard, Quan Lin, Rodrigo Lopez, Dariusz Lorenc, Hamish McWilliam, Gaurab Mukherjee, Sheila Plaister, Rajesh Radhakrishnan, Stephen Robinson, Siamak Sobhany, Petra ten Hoopen, Robert Vaughan, Vadim Zalunin, Ewan Birney
2009 J jnl
The IMGT/HLA database.
Nucleic Acids Res.
James Robinson, Matthew J. Waller, Sylvie C. Fail, Hamish McWilliam, Rodrigo Lopez, Peter Parham, Steven G. E. Marsh
2009 J jnl
Web services at the European Bioinformatics Institute-2009.
Nucleic Acids Res.
Hamish McWilliam, Franck Valentin, Mickael Goujon, Weizhong Li, Menaka Narayanasamy, Jenny Martin, Teresa Miyar, Rodrigo Lopez
2008 J jnl
Priorities for nucleotide trace, sequence and annotation data capture at the Ensembl Trace Archive and the EMBL Nucleotide Sequence Database.
Nucleic Acids Res.
Guy Cochrane, Ruth Akhtar, Philippe Aldebert, Nicola Althorpe, Alastair Baldwin, Kirsty Bates, Sumit Bhattacharyya, James K. Bonfield, Lawrence Bower, Paul Browne, Matias Castro, Tony Cox, Fehmi Demiralp, Ruth Y. Eberhardt, Nadeem Faruque, Gemma Hoad, Mikyung Jang, Tamara Kulikova, Alberto Labarga, Rasko Leinonen, Steven Leonard, Quan Lin, Rodrigo Lopez, Dariusz Lorenc, Hamish McWilliam, Gaurab Mukherjee, Francesco Nardone, Sheila Plaister, Stephen Robinson, Siamak Sobhany, Robert Vaughan, Dan Wu, Weimin Zhu, Rolf Apweiler, Tim J. P. Hubbard, Ewan Birney
2007 J jnl
Clustal W and Clustal X version 2.0.
Bioinform.
Mark A. Larkin, Gordon Blackshields, Nigel P. Brown, R. Chenna, Paul A. McGettigan, Hamish McWilliam, Franck Valentin, Iain M. Wallace, Andreas Wilm, Rodrigo Lopez, Julie Dawn Thompson, Toby J. Gibson, Desmond G. Higgins
2007 J jnl
EMBL Nucleotide Sequence Database in 2006.
Nucleic Acids Res.
Tamara Kulikova, Ruth Akhtar, Philippe Aldebert, Nicola Althorpe, Mikael Andersson, Alastair Baldwin, Kirsty Bates, Sumit Bhattacharyya, Lawrence Bower, Paul Browne, Matias Castro, Guy Cochrane, Karyn Duggan, Ruth Y. Eberhardt, Nadeem Faruque, Gemma Hoad, Carola Kanz, Charles Lee, Rasko Leinonen, Quan Lin, Vincent Lombard, Rodrigo Lopez, Dariusz Lorenc, Hamish McWilliam, Gaurab Mukherjee, Francesco Nardone, Maria Pilar Garcia Pastor, Sheila Plaister, Siamak Sobhany, Peter Stoehr, Robert Vaughan, Dan Wu, Weimin Zhu, Rolf Apweiler
2006 J jnl
EMBL Nucleotide Sequence Database: developments in 2005.
Nucleic Acids Res.
Guy Cochrane, Philippe Aldebert, Nicola Althorpe, Mikael Andersson, Wendy Baker, Alastair Baldwin, Kirsty Bates, Sumit Bhattacharyya, Paul Browne, Alexandra van den Broek, Matias Castro, Karyn Duggan, Ruth Y. Eberhardt, Nadeem Faruque, John Gamble, Carola Kanz, Tamara Kulikova, Charles Lee, Rasko Leinonen, Quan Lin, Vincent Lombard, Rodrigo Lopez, Michelle McHale, Hamish McWilliam, Gaurab Mukherjee, Francesco Nardone, Maria Pilar Garcia Pastor, Siamak Sobhany, Peter Stoehr, Katerina Tzouvara, Robert Vaughan, Dan Wu, Weimin Zhu, Rolf Apweiler
2000 J jnl
UK CropNet: a collection of databases and bioinformatics resources for crop plant genomics.
Nucleic Acids Res.
Jo L. Dicks, Mary Anderson, Linda Cardle, Sam Cartinhour, Matthew Couchman, Guy Davenport, Jeremy Dickson, Mike Gale, David F. Marshall, Sean T. May, Hamish McWilliam, Andrew O'Malia, Helen Ougham, Martin Trick, Sean Walsh, Robbie Waugh