Halima Bensmail

55 papers A 1B 4Misc 3Journal 32Unranked 15
YearRankTypeTitle / Venue / Authors
2025 J jnl
Tisslet tissues-based learning estimation for transcriptomics.
BMC Bioinform.
Ahmed Miloudi, Aisha Al-Qahtani, Thamanna Hashir, Mohamed Chikri, Halima Bensmail
2024 J jnl
ClustML: A measure of cluster pattern complexity in scatterplots learnt from human-labeled groupings.
Inf. Vis.
Mostafa M. Hamza, Ehsan Ullah, Abdelkader Baggag, Halima Bensmail, Michael Sedlmair, Michaël Aupetit
2023 — conf
A Novel Feature Extraction Technique for ECG Arrhythmia Classification Using ML.
DASC/PiCom/CBDCom/CyberSciTech
Mohammad Mominur Rahman, Ashhadul Islam, Skander Charni, Halima Bensmail, Thomas Hilbel, Samir Brahim Belhaouari
2023 J jnl
OutSingle: a novel method of detecting and injecting outliers in RNA-Seq count data using the optimal hard threshold for singular values.
Bioinform.
Edin Salkovic, Mohammad Amin Sadeghi, Abdelkader Baggag, Ahmed Gamal Rashed Salem, Halima Bensmail
2023 — conf
Progressive Fourier Transform (PFT): Enhancing Time-Frequency Representation of EEG signals for Stress and Seizure Detection.
BIBM
Nisreen Said Amer, Samir Brahim Belhaouari, Halima Bensmail
2022 J jnl
K Nearest Neighbor OveRsampling approach: An open source python package for data augmentation.
Softw. Impacts
Ashhadul Islam, Samir Brahim Belhaouari, Atiq ur Rehman, Halima Bensmail
2022 J jnl
KNNOR: An oversampling technique for imbalanced datasets.
Appl. Soft Comput.
Ashhadul Islam, Samir Brahim Belhaouari, Atiq ur Rehman, Halima Bensmail
2021 J jnl
A Novel Bayesian Outlier Score Based on the Negative Binomial Distribution for Detecting Aberrantly Expressed Genes in RNA-Seq Gene Expression Count Data.
IEEE Access
Edin Salkovic, Halima Bensmail
2021 J jnl
ClustRank: a Visual Quality Measure Trained on Perceptual Data for Sorting Scatterplots by Cluster Patterns.
CoRR
Mostafa M. Abbas, Ehsan Ullah, Abdelkader Baggag, Halima Bensmail, Michael Sedlmair, Michaël Aupetit
2021 J jnl
Computational prediction and interpretation of both general and specific types of promoters in Escherichia coli by exploiting a stacked ensemble-learning framework.
Briefings Bioinform.
Fuyi Li, Jinxiang Chen, Zongyuan Ge, Ya Wen, Yanwei Yue, Morihiro Hayashida, Abdelkader Baggag, Halima Bensmail, Jiangning Song
2021 J jnl
Data-driven enhancement of cubic phase stability in mixed-cation perovskites.
Mach. Learn. Sci. Technol.
Heesoo Park, Adnan Ali, Raghvendra Mall, Halima Bensmail, Stefano Sanvito, Fedwa El-Mellouhi
2020 J jnl
BCrystal: an interpretable sequence-based protein crystallization predictor.
Bioinform.
Abdurrahman Elbasir, Raghvendra Mall, Khalid Kunji, Reda Rawi, Zeyaul Islam, Gwo-Yu Chuang, Prasanna R. Kolatkar, Halima Bensmail
2020 J jnl
Comprehensive review and assessment of computational methods for predicting RNA post-transcriptional modification sites from RNA sequences.
Briefings Bioinform.
Zhen Chen, Pei Zhao, Fuyi Li, Yanan Wang, Alexander Ian Smith, Geoffrey I. Webb, Tatsuya Akutsu, Abdelkader Baggag, Halima Bensmail, Jiangning Song
2020 J jnl
Novel Multi Center and Threshold Ternary Pattern Based Method for Disease Detection Method Using Voice.
IEEE Access
Türker Tuncer, Sengül Dogan, Fatih Özyurt, Samir Brahim Belhaouari, Halima Bensmail
2020 J jnl
OutPyR: Bayesian inference for RNA-Seq outlier detection.
J. Comput. Sci.
Edin Salkovic, Mostafa M. Abbas, Samir Brahim Belhaouari, Khaoula Errafii, Halima Bensmail
2020 J jnl
PROSPECT: A web server for predicting protein histidine phosphorylation sites.
J. Bioinform. Comput. Biol.
Zhen Chen, Pei Zhao, Fuyi Li, André Leier, Tatiana T. Marquez-Lago, Geoffrey I. Webb, Abdelkader Baggag, Halima Bensmail, Jiangning Song
2019 J jnl
ClustMe: A Visual Quality Measure for Ranking Monochrome Scatterplots based on Cluster Patterns.
Comput. Graph. Forum
Mostafa M. Abbas, Michaël Aupetit, Michael Sedlmair, Halima Bensmail
2019 J jnl
DeepCrystal: a deep learning framework for sequence-based protein crystallization prediction.
Bioinform.
Abdurrahman Elbasir, Balasubramanian Moovarkumudalvan, Khalid Kunji, Prasanna R. Kolatkar, Raghvendra Mall, Halima Bensmail
2019 J jnl
KinVis: a visualization tool to detect cryptic relatedness in genetic datasets.
Bioinform.
Ehsan Ullah, Michaël Aupetit, Arun Das, Abhishek Patil, Nooral Al Muftah, Reda Rawi, Mohamad Saad, Halima Bensmail
2019 J jnl
Prediction of protein group function by iterative classification on functional relevance network.
Bioinform.
Ishita K. Khan, Aashish Jain, Reda Rawi, Halima Bensmail, Daisuke Kihara
2019 — conf
Toward Perception-Based Evaluation of Clustering Techniques for Visual Analytics.
IEEE VIS (Short Papers)
Michaël Aupetit, Michael Sedlmair, Mostafa M. Abbas, Abdelkader Baggag, Halima Bensmail
2018 J jnl
An unsupervised disease module identification technique in biological networks using novel quality metric based on connectivity, conductance and modularity.
F1000Research
Raghvendra Mall, Ehsan Ullah, Khalid Kunji, Michele Ceccarelli, Halima Bensmail
2018 — conf
DeepCrystal: A Deep Learning Framework for Sequence-based Protein Crystallization Prediction.
BIBM
Abdurrahman Elbasir, Balasubramanian Moovarkumudalvan, Khalid Kunji, Prasanna R. Kolatkar, Halima Bensmail, Raghvendra Mall
2018 J jnl
DeepSol: a deep learning framework for sequence-based protein solubility prediction.
Bioinform.
Sameer Khurana, Reda Rawi, Khalid Kunji, Gwo-Yu Chuang, Halima Bensmail, Raghvendra Mall
2018 — conf
ISaaC: Identifying Structural Relations in Biological Data with Copula-Based Kernel Dependency Measures.
IWBBIO (1)
Hossam Al Meer, Raghvendra Mall, Ehsan Ullah, Nasreddine Megrez, Halima Bensmail
2018 — conf
Microbiomarkers Discovery in Inflammatory Bowel Diseases using Network-Based Feature Selection.
BCB
Mostafa M. Abbas, Thanh Le, Halima Bensmail, Vasant G. Honavar, Yasser El-Manzalawy
2017 — conf
Advanced Computation of Sparse Precision Matrices for Big Data.
PAKDD (2)
Abdelkader Baggag, Halima Bensmail, Jaideep Srivastava
2017 — conf
An adaptive refinement for community detection methods for disease module identification in biological networks using novel metric based on connectivity, conductance & modularity.
BIBM
Raghvendra Mall, Ehsan Ullah, Khalid Kunji, Halima Bensmail, Michele Ceccarelli
2017 J jnl
Detection of statistically significant network changes in complex biological networks.
BMC Syst. Biol.
Raghvendra Mall, Luigi Cerulo, Halima Bensmail, Antonio Iavarone, Michele Ceccarelli
2017 — conf
Differential Community Detection in Paired Biological Networks.
BCB
Raghvendra Mall, Ehsan Ullah, Khalid Kunji, Fulvio D'Angelo, Halima Bensmail, Michele Ceccarelli
2017 — conf
Identification of cancer drug sensitivity biomarkers.
BIBM
Ehsan Ullah, Raghvendra Mall, Halima Bensmail, Reda Rawi, Saila Shama, Nooral Al Muftah, Ian Richard Thmpson
2016 B conf
A design study to identify inconsistencies in kinship information: The case of the 1000 Genomes project.
PacificVis
Michaël Aupetit, Ehsan Ullah, Reda Rawi, Halima Bensmail
2016 J jnl
COUSCOus: improved protein contact prediction using an empirical Bayes covariance estimator.
BMC Bioinform.
Reda Rawi, Raghvendra Mall, Khalid Kunji, Mohammed El Anbari, Michaël Aupetit, Ehsan Ullah, Halima Bensmail
2016 B conf
Denoised Kernel Spectral data Clustering.
IJCNN
Raghvendra Mall, Halima Bensmail, Rocco Langone, Carolina Varon, Johan A. K. Suykens
2016 — conf
Metabolomic Data Profiling for Diabetes Research in Qatar.
DEXA Workshops
Raghvendra Mall, Laure Berti-Équille, Halima Bensmail
2016 — conf
Statistical and Network Analysis of Metabolomics Data.
BCB
Ehsan Ullah, Raghvendra Mall, Reda Rawi, Halima Bensmail
2015 — conf
Residue-residue contact prediction in the HIV-1 envelope glycoprotein complex.
BIBM
Reda Rawi, Khalid Kunji, Abdelali Haoudi, Halima Bensmail
2015 B conf
Supervised Cross-Modal Factor Analysis for Multiple Modal Data Classification.
SMC
Jingbin Wang, Yihua Zhou, Kanghong Duan, Jim Jing-Yan Wang, Halima Bensmail
2014 Misc conf
COFADMM: A Computational Features Selection with Alternating Direction Method of Multipliers.
ICCS
Mohammed El Anbari, Sidra Alam, Halima Bensmail
2014 — conf
Computational Neuro-Modeling of Visual Memory: Multimodal Imaging and Analysis.
Brain Informatics and Health
Mohammed El Anbari, Nawel Nemmour, Othmane Bouhali, Reda Rawi, Ali Sheharyar, Halima Bensmail
2014 B conf
Domain transfer nonnegative matrix factorization.
IJCNN
Jim Jing-Yan Wang, Yijun Sun, Halima Bensmail
2014 J jnl
Feature selection and multi-kernel learning for sparse representation on a manifold.
Neural Networks
Jim Jing-Yan Wang, Halima Bensmail, Xin Gao
2014 J jnl
Unified framework for representing and ranking.
Pattern Recognit.
Jim Jing-Yan Wang, Halima Bensmail
2013 A conf
Cross-domain sparse coding.
CIKM
Jim Jing-Yan Wang, Halima Bensmail
2013 J jnl
Discriminative sparse coding on multi-manifolds.
Knowl. Based Syst.
Jim Jing-Yan Wang, Halima Bensmail, Nan Yao, Xin Gao
2013 J jnl
Joint learning and weighting of visual vocabulary for bag-of-feature based tissue classification.
Pattern Recognit.
Jim Jing-Yan Wang, Halima Bensmail, Xin Gao
2013 Misc conf
MetFlexo: An Automated Simulation of Realistic H
ICCS
Zeinab Atieh, Karsten Suhre, Halima Bensmail
2013 J jnl
Multiple graph regularized nonnegative matrix factorization.
Pattern Recognit.
Jim Jing-Yan Wang, Halima Bensmail, Xin Gao
2013 Misc conf
Primal-Dual Framework for Feature Selection using Least Squares Support Vector Machines.
COMAD
Raghvendra Mall, Johan A. K. Suykens, Mohammed El Anbari, Halima Bensmail
2012 J jnl
Multiple graph regularized protein domain ranking.
BMC Bioinform.
Jingyan Wang, Halima Bensmail, Xin Gao
2012 — conf
RAFNI: Robust Analysis of Functional NeuroImages with Non-normal α-Stable Error.
ICONIP (1)
Halima Bensmail, Samreen Anjum, Othmane Bouhali, Mohammed El Anbari
2005 J jnl
A novel approach for clustering proteomics data using Bayesian fast Fourier transform.
Bioinform.
Halima Bensmail, Jennifer Golek, Michelle M. Moody, O. John Semmes, Abdelali Haoudi
2005 J jnl
Clustering Gene Expression Data with Kernel Principal Components.
J. Bioinform. Comput. Biol.
Zhenqiu Liu, Dechang Chen, Halima Bensmail, Ying Xu
2003 J jnl
Model-based Clustering with Noise: Bayesian Inference and Estimation.
J. Classif.
Halima Bensmail, Jacqueline J. Meulman
1997 J jnl
Inference in model-based cluster analysis.
Stat. Comput.
Halima Bensmail, Gilles Celeux, Adrian E. Raftery, Christian P. Robert