Halid Ziya Yerebakan

20 papers A* 1Journal 12Unranked 7

Year	Rank	Type	Title / Venue / Authors
2025	J	`jnl`	BodyGPS: Anatomical Positioning System. CoRR Halid Ziya Yerebakan, Kritika Iyer, Xueqi Guo, Yoshihisa Shinagawa, Gerardo Hermosillo Valadez
2025	J	`jnl`	Consistent Point Matching. CoRR Halid Ziya Yerebakan, Gerardo Hermosillo Valadez
2025	J	`jnl`	Fast Multi-Organ Fine Segmentation in CT Images with Hierarchical Sparse Sampling and Residual Transformer. CoRR Xueqi Guo, Halid Ziya Yerebakan, Yoshihisa Shinagawa, Kritika Iyer, Gerardo Hermosillo Valadez
2024	J	`jnl`	Automatic Mapping of Anatomical Landmarks from Free-Text Using Large Language Models: Insights from Llama-2. CoRR Mohamad Abdi, Gerardo Hermosillo Valadez, Halid Ziya Yerebakan
2024	—	`conf`	Real Time Multi Organ Classification on Computed Tomography Images. DEMI@MICCAI Halid Ziya Yerebakan, Yoshihisa Shinagawa, Gerardo Hermosillo Valadez
2024	J	`jnl`	Real Time Multi Organ Classification on Computed Tomography Images. CoRR Halid Ziya Yerebakan, Yoshihisa Shinagawa, Gerardo Hermosillo Valadez
2024	—	`conf`	SAMU: An Efficient and Promptable Foundation Model for Medical Image Segmentation. MedAGI@MICCAI Joseph Bae, Xueqi Guo, Halid Ziya Yerebakan, Yoshihisa Shinagawa, Sepehr Farhand
2023	—	`conf`	A Hierarchical Descriptor Framework for On-the-Fly Anatomical Location Matching Between Longitudinal Studies. MTSAIL/LEAF/AI4Treat/MMMI/REMIA@MICCAI Halid Ziya Yerebakan, Yoshihisa Shinagawa, Mahesh Ranganath, Simon Allen-Raffl, Gerardo Hermosillo Valadez
2023	J	`jnl`	A Hierarchical Descriptor Framework for On-the-Fly Anatomical Location Matching between Longitudinal Studies. CoRR Halid Ziya Yerebakan, Yoshihisa Shinagawa, Mahesh Ranganath, Simon Allen-Raffl, Gerardo Hermosillo Valadez
2023	J	`jnl`	Deep Generative Neural Embeddings for High Dimensional Data Visualization. CoRR Halid Ziya Yerebakan, Gerardo Hermosillo Valadez
2023	J	`jnl`	Enhancing Health Data Interoperability with Large Language Models: A FHIR Study. CoRR Yikuan Li, Hanyin Wang, Halid Ziya Yerebakan, Yoshihisa Shinagawa, Yuan Luo
2021	—	`conf`	MedTextSeg: A Deep Dual Sequential Model for Section Segmentation in Medical Reports. IEEE BigData Shaika Chowdhury, Halid Ziya Yerebakan, Yoshihisa Shinagawa, Philip S. Yu
2020	—	`conf`	False positive reduction of vasculature for pulmonary nodule detection. Computer-Aided Diagnosis Colin B. Hansen, Yiyuan Zhao, Halid Ziya Yerebakan, Luca Bogoni, Anna K. Jerebko
2020	J	`jnl`	Supervised Understanding of Word Embeddings. CoRR Halid Ziya Yerebakan, Parmeet S. Bhatia, Yoshihisa Shinagawa
2018	—	`conf`	Document Representation Learning for Patient History Visualization. COLING (Demos) Halid Ziya Yerebakan, Yoshihisa Shinagawa, Parmeet S. Bhatia, Yiqiang Zhan
2017	J	`jnl`	Partially collapsed parallel Gibbs sampler for Dirichlet process mixture models. Pattern Recognit. Lett. Halid Ziya Yerebakan, Murat Dundar
2016	J	`jnl`	Hierarchical Latent Word Clustering. CoRR Halid Ziya Yerebakan, Fitsum A. Reda, Yiqiang Zhan, Yoshihisa Shinagawa
2014	J	`jnl`	A Non-parametric Bayesian Model for Joint Cell Clustering and Cluster Matching: Identification of Anomalous Sample Phenotypes with Random Effects. BMC Bioinform. Murat Dundar, Ferit Akova, Halid Ziya Yerebakan, Bartek Rajwa
2014	A*	`conf`	Batch discovery of recurring rare classes toward identifying anomalous samples. KDD Murat Dundar, Halid Ziya Yerebakan, Bartek Rajwa
2014	—	`conf`	The Infinite Mixture of Infinite Gaussian Mixtures. NIPS Halid Ziya Yerebakan, Bartek Rajwa, Murat Dundar