Hakim Tafer

15 papers Journal 11Unranked 4
YearRankTypeTitle / Venue / Authors
2014 J jnl
The genome of the recently domesticated crop plant sugar beet (
Nat.
Juliane C. Dohm, André E. Minoche, Daniela Holtgräwe, Salvador Capella-Gutiérrez, Falk Zakrzewski, Hakim Tafer, Oliver Rupp, Thomas Rosleff Sörensen, Ralf Stracke, Richard Reinhardt, Alexander Goesmann, Thomas Kraft, Britta Schulz, Peter F. Stadler, Thomas Schmidt, Toni Gabaldón, Hans Lehrach, Bernd Weisshaar, Heinz Himmelbauer
2014 J jnl
snoStrip: a snoRNA annotation pipeline.
Bioinform.
Sebastian Bartschat, Stephanie Kehr, Hakim Tafer, Peter F. Stadler, Jana Hertel
2013 J jnl
The RNAsnp web server: predicting SNP effects on local RNA secondary structure.
Nucleic Acids Res.
Radhakrishnan Sabarinathan, Hakim Tafer, Stefan E. Seemann, Ivo L. Hofacker, Peter F. Stadler, Jan Gorodkin
2011 J jnl
Fast accessibility-based prediction of RNA-RNA interactions.
Bioinform.
Hakim Tafer, Fabian Amman, Florian Eggenhofer, Peter F. Stadler, Ivo L. Hofacker
2011 — conf
MicroRNA or Not MicroRNA?
BSB
David Langenberger, Sebastian Bartschat, Jana Hertel, Steve Hoffmann, Hakim Tafer, Peter F. Stadler
2011 J jnl
PLEXY: efficient target prediction for box C/D snoRNAs.
Bioinform.
Stephanie Kehr, Sebastian Bartschat, Peter F. Stadler, Hakim Tafer
2011 J jnl
RNApredator: fast accessibility-based prediction of sRNA targets.
Nucleic Acids Res.
Florian Eggenhofer, Hakim Tafer, Peter F. Stadler, Ivo L. Hofacker
2011 J jnl
ViennaRNA Package 2.0.
Algorithms Mol. Biol.
Ronny Lorenz, Stephan H. Bernhart, Christian Höner zu Siederdissen, Hakim Tafer, Christoph Flamm, Peter F. Stadler, Ivo L. Hofacker
2008 J jnl
RNAplex: a fast tool for RNA-RNA interaction search.
Bioinform.
Hakim Tafer, Ivo L. Hofacker
2008 — conf
Translational Control by RNA-RNA Interaction: Improved Computation of RNA-RNA Binding Thermodynamics.
BIRD
Ulrike Mückstein, Hakim Tafer, Stephan H. Bernhart, Maribel Hernandez-Rosales, Jörg Vogel, Peter F. Stadler, Ivo L. Hofacker
2008 J jnl
www.rnaworkbench.com: A new program for analyzing RNA interference.
Comput. Methods Programs Biomed.
Radka Svobodová Vareková, Ivan Bradác, Martin Plchút, Michal Skrdla, Michael Wacenovsky, Helmuth Mahr, Georg Mayer, Herbert Tanner, Hermann Brugger, Josef Withalm, Peter Lederer, Heinrich J. Huber, Gerhard Gierlinger, Ronald Graf, Hakim Tafer, Ivo L. Hofacker, Peter Schuster, Martin Polcík
2007 — conf
RNAplex a Fast and Flexible RNA-RNA Interaction Search Tool.
German Conference on Bioinformatics
Hakim Tafer
2006 J jnl
Partition function and base pairing probabilities of RNA heterodimers.
Algorithms Mol. Biol.
Stephan H. Bernhart, Hakim Tafer, Ulrike Mückstein, Christoph Flamm, Peter F. Stadler, Ivo L. Hofacker
2006 J jnl
Thermodynamics of RNA-RNA binding.
Bioinform.
Ulrike Mückstein, Hakim Tafer, Jörg Hackermüller, Stephan H. Bernhart, Peter F. Stadler, Ivo L. Hofacker
2005 — conf
Thermodynamics of RNA-RNA Binding.
German Conference on Bioinformatics
Ulrike Mückstein, Hakim Tafer, Jörg Hackermüller, Stephan H. Bernhart, Peter F. Stadler, Ivo L. Hofacker