Haicang Zhang

21 papers A* 4Journal 17
YearRankTypeTitle / Venue / Authors
2025 J jnl
A survey on deep learning-based algorithms for the traveling salesman problem.
Frontiers Comput. Sci.
Jingyan Sui, Shizhe Ding, Xulin Huang, Yue Yu, Ruizhi Liu, Boyang Xia, Zhenxin Ding, Liming Xu, Haicang Zhang, Chungong Yu, Dongbo Bu
2025 J jnl
ILETIA: An AI-enhanced method for individualized trigger-oocyte pickup interval estimation of progestin-primed ovarian stimulation protocol.
CoRR
Binjian Wu, Qian Li, Zhe Kuang, Hongyuan Gao, Xinyi Liu, Haiyan Guo, Qiuju Chen, Yangruizhe Jiang, Yuqi Zhang, Jinyin Zha, Mingyu Li, Qiuhan Ren, Sishuo Feng, Haicang Zhang, Xuefeng Lu, Jian Zhang
2025 A* conf
Multi-objective antibody design with constrained preference optimization.
ICLR
Milong Ren, ZaiKai He, Haicang Zhang
2024 J jnl
Accurate and robust protein sequence design with CarbonDesign.
Nat. Mac. Intell.
Milong Ren, Chungong Yu, Dongbo Bu, Haicang Zhang
2024 A* conf
Antibody Design Using a Score-based Diffusion Model Guided by Evolutionary, Physical and Geometric Constraints.
ICML
Tian Zhu, Milong Ren, Haicang Zhang
2024 A* conf
CarbonNovo: Joint Design of Protein Structure and Sequence Using a Unified Energy-based Model.
ICML
Milong Ren, Tian Zhu, Haicang Zhang
2024 J jnl
GPCR-BSD: a database of binding sites of human G-protein coupled receptors under diverse states.
BMC Bioinform.
Fan Liu, Han Zhou, Xiaonong Li, Liangliang Zhou, Chungong Yu, Haicang Zhang, Dongbo Bu, Xinmiao Liang
2023 J jnl
Accurate and efficient protein sequence design through learning concise local environment of residues.
Bioinform.
Bin Huang, Tingwen Fan, Kaiyue Wang, Haicang Zhang, Chungong Yu, Shuyu Nie, Yangshuo Qi, Wei-Mou Zheng, Jian Han, Zheng Fan, Shiwei Sun, Sheng Ye, Huaiyi Yang, Dongbo Bu
2023 A* conf
Predicting mutational effects on protein-protein binding via a side-chain diffusion probabilistic model.
NeurIPS
Shiwei Liu, Tian Zhu, Milong Ren, Chungong Yu, Dongbo Bu, Haicang Zhang
2023 J jnl
Predicting mutational effects on protein-protein binding via a side-chain diffusion probabilistic model.
CoRR
Shiwei Liu, Tian Zhu, Milong Ren, Chungong Yu, Dongbo Bu, Haicang Zhang
2023 J jnl
Protein Structure Prediction: Challenges, Advances, and the Shift of Research Paradigms.
Genom. Proteom. Bioinform.
Bin Huang, Lupeng Kong, Chao Wang, Fusong Ju, Qi Zhang, Jianwei Zhu, Tiansu Gong, Haicang Zhang, Chungong Yu, Wei-Mou Zheng, Dongbo Bu
2022 J jnl
Predicting functional effect of missense variants using graph attention neural networks.
Nat. Mac. Intell.
Haicang Zhang, Michelle S. Xu, Xiao Fan, Wendy K. Chung, Yufeng Shen
2021 J jnl
FALCON2: a web server for high-quality prediction of protein tertiary structures.
BMC Bioinform.
Lupeng Kong, Fusong Ju, Haicang Zhang, Shiwei Sun, Dongbo Bu
2019 J jnl
Constructing effective energy functions for protein structure prediction through broadening attraction-basin and reverse Monte Carlo sampling.
BMC Bioinform.
Chao Wang, Yi Wei, Haicang Zhang, Lupeng Kong, Shiwei Sun, Wei-Mou Zheng, Dongbo Bu
2019 J jnl
Correction to: Predicting protein inter-residue contacts using composite likelihood maximization and deep learning.
BMC Bioinform.
Haicang Zhang, Qi Zhang, Fusong Ju, Jianwei Zhu, Yujuan Gao, Ziwei Xie, Minghua Deng, Shiwei Sun, Wei-Mou Zheng, Dongbo Bu
2019 J jnl
Predicting protein inter-residue contacts using composite likelihood maximization and deep learning.
BMC Bioinform.
Haicang Zhang, Qi Zhang, Fusong Ju, Jianwei Zhu, Yujuan Gao, Ziwei Xie, Minghua Deng, Shiwei Sun, Wei-Mou Zheng, Dongbo Bu
2018 J jnl
Predicting protein inter-residue contacts using composite likelihood maximization and deep learning.
CoRR
Haicang Zhang, Qi Zhang, Fusong Ju, Jianwei Zhu, Shiwei Sun, Yujuan Gao, Ziwei Xie, Minghua Deng, Wei-Mou Zheng, Dongbo Bu
2017 J jnl
Improving prediction of burial state of residues by exploiting correlation among residues.
BMC Bioinform.
Hai'e Gong, Haicang Zhang, Jianwei Zhu, Chao Wang, Shiwei Sun, Wei-Mou Zheng, Dongbo Bu
2017 J jnl
Improving protein fold recognition by extracting fold-specific features from predicted residue-residue contacts.
Bioinform.
Jianwei Zhu, Haicang Zhang, Shuai Cheng Li, Chao Wang, Lupeng Kong, Shiwei Sun, Wei-Mou Zheng, Dongbo Bu
2016 J jnl
FALCON@home: a high-throughput protein structure prediction server based on remote homologue recognition.
Bioinform.
Chao Wang, Haicang Zhang, Wei-Mou Zheng, Dong Xu, Jianwei Zhu, Bing Wang, Kang Ning, Shiwei Sun, Shuai Cheng Li, Dongbo Bu
2014 J jnl
On the inapproximability of minimizing cascading failures under the deterministic threshold model.
Inf. Process. Lett.
Lei Nie, Jingjie Liu, Haicang Zhang, Zhiwei Xu