Hahnbeom Park

14 papers A* 1Journal 13
YearRankTypeTitle / Venue / Authors
2025 J jnl
Deep learning molecular interaction motifs from receptor structures alone.
J. Cheminformatics
Seeun Kim, Simaek Oh, Hyeonuk Woo, Jiho Sim, Chaok Seok, Hahnbeom Park
2025 J jnl
SHARP: Generating Synthesizable Molecules via Fragment-Based Hierarchical Action-Space Reinforcement Learning for Pareto Optimization.
J. Chem. Inf. Model.
Jeonghyeon Kim, Seongok Ryu, Woohyeong Lee, Ansoo Lee, Hahnbeom Park, Chaok Seok
2024 J jnl
Recent advances in interpretable machine learning using structure-based protein representations.
CoRR
Luiz Felipe Vecchietti, Minji Lee, Begench Hangeldiyev, Hyunkyu Jung, Hahnbeom Park, Tae-Kyun Kim, Meeyoung Cha, Ho Min Kim
2023 J jnl
Benchmarking applicability of medium-resolution cryo-EM protein structures for structure-based drug design.
J. Comput. Chem.
Seho Lee, Chaok Seok, Hahnbeom Park
2020 J jnl
Efficient consideration of coordinated water molecules improves computational protein-protein and protein-ligand docking discrimination.
PLoS Comput. Biol.
Ryan E. Pavlovicz, Hahnbeom Park, Frank DiMaio
2019 A* conf
Conditioning by adaptive sampling for robust design.
ICML
David H. Brookes, Hahnbeom Park, Jennifer Listgarten
2019 J jnl
Conditioning by adaptive sampling for robust design.
CoRR
David H. Brookes, Hahnbeom Park, Jennifer Listgarten
2018 J jnl
De novo design of a fluorescence-activating β-barrel.
Nat.
Jiayi Dou, Anastassia A. Vorobieva, William Sheffler, Lindsey Doyle, Hahnbeom Park, Matthew J. Bick, Binchen Mao, Glenna W. Foight, Min-Yen Lee, Lauren A. Gagnon, Lauren P. Carter, Banumathi Sankaran, Sergey Ovchinnikov, Enrique Marcos, Po-Ssu Huang, Joshua C. Vaughan, Barry L. Stoddard, David Baker
2018 J jnl
GalaxyGPCRloop: Template-Based and Ab Initio Structure Sampling of the Extracellular Loops of G-Protein-Coupled Receptors.
J. Chem. Inf. Model.
Jonghun Won, Gyu Rie Lee, Hahnbeom Park, Chaok Seok
2013 J jnl
GalaxyGemini: a web server for protein homo-oligomer structure prediction based on similarity.
Bioinform.
Hasup Lee, Hahnbeom Park, Junsu Ko, Chaok Seok
2013 J jnl
GalaxyRefine: protein structure refinement driven by side-chain repacking.
Nucleic Acids Res.
Lim Heo, Hahnbeom Park, Chaok Seok
2012 J jnl
GalaxyTBM: template-based modeling by building a reliable core and refining unreliable local regions.
BMC Bioinform.
Junsu Ko, Hahnbeom Park, Chaok Seok
2012 J jnl
GalaxyWEB server for protein structure prediction and refinement.
Nucleic Acids Res.
Junsu Ko, Hahnbeom Park, Lim Heo, Chaok Seok
2011 J jnl
The FALC-Loop web server for protein loop modeling.
Nucleic Acids Res.
Junsu Ko, Dongseon Lee, Hahnbeom Park, Evangelos A. Coutsias, Julian Lee, Chaok Seok