Gwo-Yu Chuang

12 papers Journal 12
YearRankTypeTitle / Venue / Authors
2024 J jnl
mtx-COBRA: Subcellular localization prediction for bacterial proteins.
Comput. Biol. Medicine
Isha Arora, Arkadij Kummer, Hao Zhou, Mihaela Gadjeva, Eric J. Ma, Gwo-Yu Chuang, Edison Ong
2022 J jnl
GLYCO: a tool to quantify glycan shielding of glycosylated proteins.
Bioinform.
Myungjin Lee, Mateo Reveiz, Reda Rawi, Peter D. Kwong, Gwo-Yu Chuang
2020 J jnl
BCrystal: an interpretable sequence-based protein crystallization predictor.
Bioinform.
Abdurrahman Elbasir, Raghvendra Mall, Khalid Kunji, Reda Rawi, Zeyaul Islam, Gwo-Yu Chuang, Prasanna R. Kolatkar, Halima Bensmail
2018 J jnl
CRISPro: An Automated Pipeline for Protein Conformation Stabilization by Proline.
J. Chem. Inf. Model.
Reda Rawi, Chen-Hsiang Shen, Peter D. Kwong, Gwo-Yu Chuang
2018 J jnl
DeepSol: a deep learning framework for sequence-based protein solubility prediction.
Bioinform.
Sameer Khurana, Reda Rawi, Khalid Kunji, Gwo-Yu Chuang, Halima Bensmail, Raghvendra Mall
2018 J jnl
PaRSnIP: sequence-based protein solubility prediction using gradient boosting machine.
Bioinform.
Reda Rawi, Raghvendra Mall, Khalid Kunji, Chen-Hsiang Shen, Peter D. Kwong, Gwo-Yu Chuang
2014 J jnl
NEP: web server for epitope prediction based on antibody neutralization of viral strains with diverse sequences.
Nucleic Acids Res.
Gwo-Yu Chuang, David Liou, Peter D. Kwong, Ivelin Georgiev
2014 J jnl
Structure and immune recognition of trimeric pre-fusion HIV-1 Env.
Nat.
Marie Pancera, Tongqing Zhou, Aliaksandr Druz, Ivelin S. Georgiev, Cinque S. Soto, Jason Gorman, Jinghe Huang, Priyamvada Acharya, Gwo-Yu Chuang, Gilad Ofek, Guillaume B. E. Stewart-Jones, Jonathan Stuckey, Robert T. Bailer, M. Gordon Joyce, Mark K. Louder, Nancy Tumba, Yongping Yang, Baoshan Zhang, Myron S. Cohen, Barton F. Haynes, John R. Mascola, Lynn Morris, James B. Munro, Scott C. Blanchard, Walther Mothes, Mark Connors, Peter D. Kwong
2012 J jnl
Application of asymmetric statistical potentials to antibody-protein docking.
Bioinform.
Ryan Brenke, David R. Hall, Gwo-Yu Chuang, Stephen R. Comeau, Tanggis Bohnuud, Dmitri Beglov, Ora Schueler-Furman, Sandor Vajda, Dima Kozakov
2012 J jnl
Computational prediction of N-linked glycosylation incorporating structural properties and patterns.
Bioinform.
Gwo-Yu Chuang, Jeffrey C. Boyington, M. Gordon Joyce, Jiang Zhu, Gary J. Nabel, Peter D. Kwong, Ivelin Georgiev
2009 J jnl
Detection of ligand binding hot spots on protein surfaces via fragment-based methods: application to DJ-1 and glucocerebrosidase.
J. Comput. Aided Mol. Des.
Melissa R. Landon, Raquel L. Lieberman, Quyen Q. Hoang, Shulin Ju, Jose M. M. Caaveiro, Susan D. Orwig, Dima Kozakov, Ryan Brenke, Gwo-Yu Chuang, Dmitri Beglov, Sandor Vajda, Gregory A. Petsko, Dagmar Ringe
2009 J jnl
Fragment-based identification of druggable 'hot spots' of proteins using Fourier domain correlation techniques.
Bioinform.
Ryan Brenke, Dima Kozakov, Gwo-Yu Chuang, Dmitri Beglov, David R. Hall, Melissa R. Landon, Carla Mattos, Sandor Vajda