Guillaume Bret

14 papers Journal 14
YearRankTypeTitle / Venue / Authors
2026 J jnl
Assessing Boltz-2 Performance for the Binding Classification of Docking Hits.
J. Chem. Inf. Model.
Guillaume Bret, François Sindt, Didier Rognan
2025 J jnl
On the Difficulty to Rescore Hits from Ultralarge Docking Screens.
J. Chem. Inf. Model.
François Sindt, Guillaume Bret, Didier Rognan
2024 J jnl
Benchmarking AlphaFold-Generated Structures of Chemokine-Chemokine Receptor Complexes.
J. Chem. Inf. Model.
Lauri Urvas, Luca Chiesa, Guillaume Bret, Célien Jacquemard, Esther Kellenberger
2024 J jnl
CACHE Challenge #1: Targeting the WDR Domain of LRRK2, A Parkinson's Disease Associated Protein.
J. Chem. Inf. Model.
Fengling Li, Suzanne Ackloo, Cheryl H. Arrowsmith, Fuqiang Ban, Christopher J. Barden, Hartmut Beck, Jan Beránek, Francois Berenger, Albina Bolotokova, Guillaume Bret, Marko Breznik, Emanuele Carosati, Irene Chau, Yu Chen, Artem Cherkasov, Dennis Della Corte, Katrin Denzinger, Aiping Dong, Sorin Draga, Ian Dunn, Kristina Edfeldt, Aled M. Edwards, Merveille K. I. Eguida, Paul Eisenhuth, Lukas Friedrich, Alexander Fuerll, Spencer S. Gardiner, Francesco Gentile, Pegah Ghiabi, Elisa Gibson, Marta Glavatskikh, Christoph Gorgulla, Judith Guenther, Anders Gunnarsson, Filipp Gusev, Evgeny Gutkin, Levon Halabelian, Rachel J. Harding, Alexander Hillisch, Laurent Hoffer, Anders Hogner, Scott Houliston, John J. Irwin, Olexandr Isayev, Aleksandra Ivanova, Célien Jacquemard, Austin J. Jarrett, Jan H. Jensen, Dmitri Kireev, Julian Kleber, S. Benjamin Koby, David Koes, Ashutosh Kumar, Maria G. Kurnikova, Alina Kutlushina, Uta F. Lessel, Fabian Liessmann, Sijie Liu, Wei Lu, Jens Meiler, Akhila Mettu, Guzel Minibaeva, Rocco Moretti, Connor J. Morris, Chamali Narangoda, Theresa Noonan, Leon Obendorf, Szymon Pach, Amit Pandit, Sumera Perveen, Gennady Poda, Pavel G. Polishchuk, Kristina Puls, Vera Pütter, Didier Rognan, Dylan Roskams-Edris, Christina E. M. Schindler, François Sindt, Vojtech Spiwok, Casper Steinmann, Rick L. Stevens, Valerij Talagayev, Damon Tingey, Oanh Vu, W. Patrick Walters, Xiaowen Wang, Zhenyu Wang, Gerhard Wolber, Clemens Alexander Wolf, Lars Wortmann, Hong Zeng, Carlos A. Zepeda, Kam Y. J. Zhang, Jixian Zhang, Shuangjia Zheng, Matthieu Schapira
2024 J jnl
Subpocket Similarity-Based Hit Identification for Challenging Targets: Application to the WDR Domain of LRRK2.
J. Chem. Inf. Model.
Merveille K. I. Eguida, Guillaume Bret, François Sindt, Fengling Li, Irene Chau, Suzanne Ackloo, Cheryl H. Arrowsmith, Albina Bolotokova, Pegah Ghiabi, Elisa Gibson, Levon Halabelian, Scott Houliston, Rachel J. Harding, Ashley Hutchinson, Peter Loppnau, Sumera Perveen, Almagul Seitova, Hong Zeng, Matthieu Schapira, Didier Rognan
2022 J jnl
Comparing transmembrane protein structures with ATOLL.
Bioinform.
Célien Jacquemard, Guillaume Bret, Thomas Grutter, Esther Kellenberger
2021 J jnl
True Accuracy of Fast Scoring Functions to Predict High-Throughput Screening Data from Docking Poses: The Simpler the Better.
J. Chem. Inf. Model.
Viet-Khoa Tran-Nguyen, Guillaume Bret, Didier Rognan
2019 J jnl
All in One: Cavity Detection, Druggability Estimate, Cavity-Based Pharmacophore Perception, and Virtual Screening.
J. Chem. Inf. Model.
Viet-Khoa Tran-Nguyen, Franck Da Silva, Guillaume Bret, Didier Rognan
2018 J jnl
Ranking docking poses by graph matching of protein-ligand interactions: lessons learned from the D3R Grand Challenge 2.
J. Comput. Aided Mol. Des.
Priscila da Silva Figueiredo Celestino Gomes, Franck Da Silva, Guillaume Bret, Didier Rognan
2016 J jnl
Docking pose selection by interaction pattern graph similarity: application to the D3R grand challenge 2015.
J. Comput. Aided Mol. Des.
Inna Slynko, Franck Da Silva, Guillaume Bret, Didier Rognan
2015 J jnl
IChemPIC: A Random Forest Classifier of Biological and Crystallographic Protein-Protein Interfaces.
J. Chem. Inf. Model.
Franck Da Silva, Jérémy Desaphy, Guillaume Bret, Didier Rognan
2015 J jnl
sc-PDB: a 3D-database of ligandable binding sites - 10 years on.
Nucleic Acids Res.
Jérémy Desaphy, Guillaume Bret, Didier Rognan, Esther Kellenberger
2006 J jnl
Assessing the Scaffold Diversity of Screening Libraries.
J. Chem. Inf. Model.
Mireille Krier, Guillaume Bret, Didier Rognan
2006 J jnl
sc-PDB: an Annotated Database of Druggable Binding Sites from the Protein Data Bank.
J. Chem. Inf. Model.
Esther Kellenberger, Pascal Muller, Claire Schalon, Guillaume Bret, Nicolas Foata, Didier Rognan