Guillaume Bouvier

14 papers Journal 13
YearRankTypeTitle / Venue / Authors
2024 J jnl
AlignScape, displaying sequence similarity using self-organizing maps.
Frontiers Bioinform.
Isaac Filella-Merce, Vincent Mallet, Eric Durand, Michael Nilges, Guillaume Bouvier, Riccardo Pellarin
2022 J jnl
InDeep: 3D fully convolutional neural networks to assist in silico drug design on protein-protein interactions.
Bioinform.
Vincent Mallet, Luis Checa Ruano, Alexandra Moine-Franel, Michael Nilges, Karen Druart, Guillaume Bouvier, Olivier Sperandio
2021 J jnl
quicksom: Self-Organizing Maps on GPUs for clustering of molecular dynamics trajectories.
Bioinform.
Vincent Mallet, Michael Nilges, Guillaume Bouvier
2018 J jnl
Meet-U: Educating through research immersion.
PLoS Comput. Biol.
Nika Abdollahi, Alexandre Albani, Éric Anthony, Agnes Baud, Mélissa Cardon, Robert Clerc, Dariusz Czernecki, Romain Conte, Laurent David, Agathe Delaune, Samia Djerroud, Pauline Fourgoux, Nadège Guiglielmoni, Jeanne Laurentie, Nathalie Lehmann, Camille Lochard, Rémi Montagne, Vasiliki Myrodia, Vaitea Opuu, Elise Parey, Lélia Polit, Sylvain Privé, Chloé Quignot, Maria Ruiz-Cuevas, Mariam Sissoko, Nicolas Sompairac, Audrey Vallerix, Violaine Verrecchia, Marc Delarue, Raphaël Guérois, Yann Ponty, Sophie Sacquin-Mora, Alessandra Carbone, Christine Froidevaux, Stéphane Le Crom, Olivier Lespinet, Martin Weigt, Samer Abboud, Juliana S. Bernardes, Guillaume Bouvier, Chloé Dequeker, Arnaud Ferré, Patrick Fuchs, Gaëlle Lelandais, Pierre Poulain, Hugues Richard, Hugo Schweke, Elodie Laine, Anne Lopes
2016 J jnl
Building Graphs To Describe Dynamics, Kinetics, and Energetics in the d-ALa: d-Lac Ligase VanA.
J. Chem. Inf. Model.
Nathalie Duclert-Savatier, Guillaume Bouvier, Michael Nilges, Thérèse E. Malliavin
2016 J jnl
Improved large-scale prediction of growth inhibition patterns using the NCI60 cancer cell line panel.
Bioinform.
Isidro Cortes-Ciriano, Gerard J. P. van Westen, Guillaume Bouvier, Michael Nilges, John P. Overington, Andreas Bender, Thérèse E. Malliavin
2015 J jnl
An algorithm to enumerate all possible protein conformations verifying a set of distance constraints.
BMC Bioinform.
Andrea Cassioli, Benjamin Bardiaux, Guillaume Bouvier, Antonio Mucherino, Rafael Alves, Leo Liberti, Michael Nilges, Carlile Lavor, Thérèse E. Malliavin
2015 J jnl
An automatic tool to analyze and cluster macromolecular conformations based on self-organizing maps.
Bioinform.
Guillaume Bouvier, Nathan Desdouits, Mathias Ferber, Arnaud Blondel, Michael Nilges
2015 J jnl
Identification of binding sites and favorable ligand binding moieties by virtual screening and self-organizing map analysis.
BMC Bioinform.
Emna Harigua-Souiai, Isidro Cortes-Ciriano, Nathan Desdouits, Thérèse E. Malliavin, Ikram Guizani, Michael Nilges, Arnaud Blondel, Guillaume Bouvier
2014 J jnl
Functional Motions Modulating VanA Ligand Binding Unraveled by Self-Organizing Maps.
J. Chem. Inf. Model.
Guillaume Bouvier, Nathalie Duclert-Savatier, Nathan Desdouits, Djalal Meziane-Cherif, Arnaud Blondel, Patrice Courvalin, Michael Nilges, Thérèse E. Malliavin
2013 J jnl
A convective replica-exchange method for sampling new energy basins.
J. Comput. Chem.
Yannick G. Spill, Guillaume Bouvier, Michael Nilges
2013 J jnl
Erratum: A convective replica-exchange method for sampling new energy basins.
J. Comput. Chem.
Yannick G. Spill, Guillaume Bouvier, Michael Nilges
2010 J jnl
Automatic clustering of docking poses in virtual screening process using self-organizing map.
Bioinform.
Guillaume Bouvier, Nathalie Evrard-Todeschi, Jean-Pierre Girault, Gildas Bertho
2010 — —
Étude d'inhibiteurs de l'intégrase du VIH-1 par RMN et modélisation moléculaire : Développement et validation d'un outil de criblage virtuel. (HIV-1 integrase inhibitors study by NMR and molecular modeling).
Guillaume Bouvier