Guergana Savova

79 papers A* 2A 1Misc 24Journal 20Unranked 29

Year	Rank	Type	Title / Venue / Authors
2025	A*	`conf`	Aspect-Oriented Summarization for Psychiatric Short-Term Readmission Prediction. EMNLP Wonjin Yoon, Boyu Ren, Spencer Thomas, Chanhwi Kim, Guergana Savova, Mei-Hua Hall, Tim Miller
2025	J	`jnl`	Aspect-Oriented Summarization for Psychiatric Short-Term Readmission Prediction. CoRR Wonjin Yoon, Boyu Ren, Spencer Thomas, Chanwhi Kim, Guergana Savova, Mei-Hua Hall, Timothy Miller
2025	J	`jnl`	Assessing the Macro and Micro Effects of Random Seeds on Fine-Tuning Large Language Models. CoRR Hao Zhou, Guergana Savova, Lijing Wang
2025	J	`jnl`	Identifying task groupings for multi-task learning using pointwise V-usable information. J. Biomed. Informatics Yingya Li, Timothy A. Miller, Steven Bethard, Guergana Savova
2024	—	`conf`	Adapting Abstract Meaning Representation Parsing to the Clinical Narrative - the SPRING THYME parser. ClinicalNLP@NAACL Jon Z. Cai, Kristin Wright-Bettner, Martha Palmer, Guergana Savova, James H. Martin
2024	J	`jnl`	Artificial Intelligence in the Legal Field: Law Students Perspective. CoRR Daniela Andreeva, Guergana Savova
2024	J	`jnl`	Identifying Task Groupings for Multi-Task Learning Using Pointwise V-Usable Information. CoRR Yingya Li, Timothy Miller, Steven Bethard, Guergana Savova
2024	—	`conf`	Overview of the 2024 Shared Task on Chemotherapy Treatment Timeline Extraction. ClinicalNLP@NAACL Jiarui Yao, Harry Hochheiser, Wonjin Yoon, Eli Goldner, Guergana Savova
2024	J	`jnl`	WorldMedQA-V: a multilingual, multimodal medical examination dataset for multimodal language models evaluation. CoRR João Matos, Shan Chen, Siena Placino, Yingya Li, Juan Carlos Climent Pardo, Daphna Idan, Takeshi Tohyama, David S. Restrepo, Luis Filipe Nakayama, Jose M. M. Pascual-Leone, Guergana Savova, Hugo J. W. L. Aerts, Leo A. Celi, An-Kwok Ian Wong, Danielle S. Bitterman, Jack Gallifant
2023	—	`conf`	End-to-end clinical temporal information extraction with multi-head attention. BioNLP@ACL Timothy Miller, Steven Bethard, Dmitriy Dligach, Guergana Savova
2023	J	`jnl`	Improving model transferability for clinical note section classification models using continued pretraining. J. Am. Medical Informatics Assoc. Weipeng Zhou, Meliha Yetisgen, Majid Afshar, Yanjun Gao, Guergana Savova, Timothy A. Miller
2023	J	`jnl`	Measuring Pointwise $\mathcal{V}$-Usable Information In-Context-ly. CoRR Sheng Lu, Shan Chen, Yingya Li, Danielle S. Bitterman, Guergana Savova, Iryna Gurevych
2023	—	`conf`	Measuring Pointwise \mathcalV-Usable Information In-Context-ly. EMNLP (Findings) Sheng Lu, Shan Chen, Yingya Li, Danielle S. Bitterman, Guergana Savova, Iryna Gurevych
2023	—	`conf`	Textual Entailment for Temporal Dependency Graph Parsing. ClinicalNLP@ACL Jiarui Yao, Steven Bethard, Kristin Wright-Bettner, Eli Goldner, David Harris, Guergana Savova
2023	—	`conf`	Two-Stage Fine-Tuning for Improved Bias and Variance for Large Pretrained Language Models. ACL (1) Lijing Wang, Yingya Li, Timothy Miller, Steven Bethard, Guergana Savova
2022	Misc	`conf`	DeepPhe: Natural Language Processing Tools for Cancer Research and Surveillance. AMIA Harry Hochheiser, Sean Finan, Zhou Yuan, John D. Levander, Eric B. Durbin, Isaac Hands, Ramakanth Kavuluru, Jeremy L. Warner, Guergana Savova
2021	—	`conf`	EntityBERT: Entity-centric Masking Strategy for Model Pretraining for the Clinical Domain. BioNLP@NAACL-HLT Chen Lin, Timothy Miller, Dmitriy Dligach, Steven Bethard, Guergana Savova
2020	—	`conf`	A BERT-based One-Pass Multi-Task Model for Clinical Temporal Relation Extraction. BioNLP Chen Lin, Timothy Miller, Dmitriy Dligach, Farig Sadeque, Steven Bethard, Guergana Savova
2020	Misc	`conf`	De-Identification of Clinical Text: Stakeholders' Perspectives and Acceptance of Automatic De-Identification. AMIA Stéphane M. Meystre, Jonathan C. Silverstein, Guergana Savova, Valentina Petkov, Bradley A. Malin
2020	—	`conf`	Defining and Learning Refined Temporal Relations in the Clinical Narrative. LOUHI@EMNLP Kristin Wright-Bettner, Chen Lin, Timothy Miller, Steven Bethard, Dmitriy Dligach, Martha Palmer, James H. Martin, Guergana Savova
2020	J	`jnl`	Diagnosis Prevalence vs. Efficacy in Machine-learning Based Diagnostic Decision Support. CoRR Gil Alon, Elizabeth Chen, Guergana Savova, Carsten Eickhoff
2020	J	`jnl`	Does BERT need domain adaptation for clinical negation detection? J. Am. Medical Informatics Assoc. Chen Lin, Steven Bethard, Dmitriy Dligach, Farig Sadeque, Guergana Savova, Timothy A. Miller
2020	—	`conf`	Extracting Relations between Radiotherapy Treatment Details. ClinicalNLP@EMNLP Danielle S. Bitterman, Timothy Miller, David Harris, Chen Lin, Sean Finan, Jeremy L. Warner, Raymond H. Mak, Guergana Savova
2020	J	`jnl`	Mining Misdiagnosis Patterns from Biomedical Literature. CoRR Cindy Li, Elizabeth Chen, Guergana Savova, Hamish Fraser, Carsten Eickhoff
2020	Misc	`conf`	Training Women for Leadership in Informatics and Digital Health: A Report from the Inaugural Women in AMIA Leadership Program. AMIA Wendy W. Chapman, Adela Grando, Merida L. Johns, Guergana Savova, Maia Hightower
2019	—	`conf`	Cross-document coreference: An approach to capturing coreference without context. LOUHI@EMNLP Kristin Wright-Bettner, Martha Palmer, Guergana Savova, Piet C. de Groen, Timothy Miller
2018	Misc	`conf`	ADEPT: An End-to-End System for High-Throughput Pharmacovigilance. AMIA Alon Geva, Jason P. Stedman, Guergana Savova, Chen Lin, Shannon F. Manzi, Paul Avillach, Kenneth D. Mandl
2018	J	`jnl`	Clinical Natural Language Processing in languages other than English: opportunities and challenges. J. Biomed. Semant. Aurélie Névéol, Hercules Dalianis, Sumithra Velupillai, Guergana Savova, Pierre Zweigenbaum
2018	Misc	`conf`	Computable Longitudinal Patient Trajectories. AMIA Jeremy L. Warner, Guergana Savova, Noemie Elhadad, Lisa Bastarache, David Gotz
2018	—	`conf`	Self-training improves Recurrent Neural Networks performance for Temporal Relation Extraction. Louhi@EMNLP Chen Lin, Timothy Miller, Dmitriy Dligach, Hadi Amiri, Steven Bethard, Guergana Savova
2018	—	`conf`	Spotting Spurious Data with Neural Networks. NAACL-HLT Hadi Amiri, Timothy Miller, Guergana Savova
2018	Misc	`conf`	Toward Large-scale and Multi-facet Analysis of First Person Alcohol Drinking. AMIA Hadi Amiri, Kara M. Magane, Lauren E. Wisk, Guergana Savova, Elissa R. Weitzman
2018	Misc	`conf`	Women in AMIA - Resources for Emerging Leaders. AMIA Guergana Savova, Merida L. Johns, Nancy M. Lorenzi, Patricia F. Brennan, Rebecca Crowley Jacobson
2017	Misc	`conf`	Clinical Natural Language Processing in Languages Other Than English. AMIA Aurélie Névéol, Noémie Elhadad, Sumithra Velupillai, Hua Xu, Guergana Savova
2017	Misc	`conf`	DeepPhe - A Natural Language Processing System for Extracting Cancer Phenotypes from Clinical Records. AMIA Guergana Savova, Eugene Tseytlin, Sean Finan, Melissa Castine, Timothy A. Miller, Olga Medvedeva, David Harris, Harry Hochheiser, Chen Lin, Girish Chavan, Rebecca Jacobson
2017	—	`conf`	Neural Temporal Relation Extraction. EACL (2) Dmitriy Dligach, Timothy Miller, Chen Lin, Steven Bethard, Guergana Savova
2017	—	`ed.`	Proceedings of the Biomedical NLP Workshop associated with RANLP 2017, Varna, Bulgaria, September 2017 BiomedicalNLP@RANLP Svetla Boytcheva, Kevin Bretonnel Cohen, Guergana Savova, Galia Angelova
2017	A*	`conf`	Repeat before Forgetting: Spaced Repetition for Efficient and Effective Training of Neural Networks. EMNLP Hadi Amiri, Timothy Miller, Guergana Savova
2017	—	`conf`	Representations of Time Expressions for Temporal Relation Extraction with Convolutional Neural Networks. BioNLP Chen Lin, Timothy Miller, Dmitriy Dligach, Steven Bethard, Guergana Savova
2017	—	`conf`	SemEval-2017 Task 12: Clinical TempEval. SemEval@ACL Steven Bethard, Guergana Savova, Martha Palmer, James Pustejovsky
2017	J	`jnl`	Towards generalizable entity-centric clinical coreference resolution. J. Biomed. Informatics Timothy Miller, Dmitriy Dligach, Steven Bethard, Chen Lin, Guergana Savova
2017	—	`conf`	Unsupervised Domain Adaptation for Clinical Negation Detection. BioNLP Timothy A. Miller, Steven Bethard, Hadi Amiri, Guergana Savova
2016	J	`jnl`	An information model for computable cancer phenotypes. BMC Medical Informatics Decis. Mak. Harry Hochheiser, Melissa Castine, David Harris, Guergana Savova, Rebecca S. Jacobson
2016	J	`jnl`	Developing an Algorithm to Detect Early Childhood Obesity in Two Tertiary Pediatric Medical Centers. Appl. Clin. Inform. Cassandra Brady, Bahram Namjou, Stephanie Kennebeck, Jonathan Bickel, Nandan Patibandla, Yizhao Ni, Sara Van Driest, Lixin Chen, Ashton Roach, Beth Cobb, Jacqueline Kirby, Joshua C. Denny, Lisa Bailey-Davis, Marc S. Williams, Keith Marsolo, Imre Solti, Ingrid A. Holm, John Harley, Isaac S. Kohane, Guergana Savova, Nancy Crimmins, Todd Lingren, Vidhu Thaker
2016	Misc	`conf`	Feature Portability in Cross-domain Clinical Coreference. AMIA Timothy A. Miller, Dmitriy Dligach, Chen Lin, Steven Bethard, Guergana Savova
2016	—	`conf`	Improving Temporal Relation Extraction with Training Instance Augmentation. BioNLP@ACL Chen Lin, Timothy Miller, Dmitriy Dligach, Steven Bethard, Guergana Savova
2016	J	`jnl`	Normalizing acronyms and abbreviations to aid patient understanding of clinical texts: ShARe/CLEF eHealth Challenge 2013, Task 2. J. Biomed. Semant. Danielle L. Mowery, Brett R. South, Lee M. Christensen, Jianwei Leng, Laura-Maria Peltonen, Sanna Salanterä, Hanna Suominen, David Martínez, Sumithra Velupillai, Noémie Elhadad, Guergana Savova, Sameer Pradhan, Wendy W. Chapman
2016	J	`jnl`	PheKB: a catalog and workflow for creating electronic phenotype algorithms for transportability. J. Am. Medical Informatics Assoc. Jacqueline Kirby, Peter Speltz, Luke V. Rasmussen, Melissa A. Basford, Omri Gottesman, Peggy L. Peissig, Jennifer A. Pacheco, Gerard Tromp, Jyotishman Pathak, David S. Carrell, Stephen B. Ellis, Todd Lingren, William K. Thompson, Guergana Savova, Jonathan L. Haines, Dan M. Roden, Paul A. Harris, Joshua C. Denny
2016	—	`conf`	SemEval-2016 Task 12: Clinical TempEval. SemEval@NAACL-HLT Steven Bethard, Guergana Savova, Wei-Te Chen, Leon Derczynski, James Pustejovsky, Marc Verhagen
2016	—	`conf`	Unsupervised Document Classification with Informed Topic Models. BioNLP@ACL Timothy Miller, Dmitriy Dligach, Guergana Savova
2015	Misc	`conf`	Demonstrating the Advantages of Applying Data Mining Techniques on Time-Dependent Electronic Medical Records. AMIA Uri Kartoun, Vishesh Kumar, Su-Chun Cheng, Sheng Yu, Katherine P. Liao, Elizabeth W. Karlson, Ashwin N. Ananthakrishnan, Zongqi Xia, Vivian S. Gainer, Andrew Cagan, Guergana Savova, Pei J. Chen, Shawn N. Murphy, Susanne E. Churchill, Isaac S. Kohane, Peter Szolovits, Tianxi Cai, Stanley Y. Shaw
2015	J	`jnl`	Evaluating the state of the art in disorder recognition and normalization of the clinical narrative. J. Am. Medical Informatics Assoc. Sameer Pradhan, Noémie Elhadad, Brett R. South, David Martínez, Lee M. Christensen, Amy Vogel, Hanna Suominen, Wendy W. Chapman, Guergana Savova
2015	—	`conf`	Extracting Time Expressions from Clinical Text. BioNLP@IJCNLP Timothy Miller, Steven Bethard, Dmitriy Dligach, Chen Lin, Guergana Savova
2015	Misc	`conf`	Natural Language Processing for Phenotype Extraction: Challenges in Extraction and Representation. AMIA Guergana Savova, Rebecca S. Jacobson, Joshua C. Denny, Nicole L. Washington, Harry Hochheiser
2015	Misc	`conf`	Robust Sentence Segmentation for Clinical Text. AMIA Timothy A. Miller, Sean Finan, Dmitriy Dligach, Guergana Savova
2015	—	`conf`	SemEval-2015 Task 6: Clinical TempEval. SemEval@NAACL-HLT Steven Bethard, Leon Derczynski, Guergana Savova, James Pustejovsky, Marc Verhagen
2015	Misc	`conf`	Semi-supervised Learning for Phenotyping Tasks. AMIA Dmitriy Dligach, Timothy A. Miller, Guergana Savova
2014	Misc	`conf`	Clinical Natural Language Processing in Languages Other Than English. AMIA Aurélie Névéol, Hercules Dalianis, Guergana Savova, Pierre Zweigenbaum
2014	—	`conf`	Descending-Path Convolution Kernel for Syntactic Structures. ACL (2) Chen Lin, Timothy Miller, Alvin Kho, Steven Bethard, Dmitriy Dligach, Sameer Pradhan, Guergana Savova
2014	Misc	`conf`	Developing a Section Labeler for Clinical Documents. AMIA Peter J. Haug, Xinzi Wu, Jeffrey P. Ferraro, Guergana Savova, Stanley M. Huff, Christopher G. Chute
2014	Misc	`conf`	Narrative Event and Temporal Relation Visualization Tool. AMIA Sean Finan, Piet C. de Groen, Guergana Savova
2014	—	`conf`	SemEval-2014 Task 7: Analysis of Clinical Text. SemEval@COLING Sameer Pradhan, Noémie Elhadad, Wendy W. Chapman, Suresh Manandhar, Guergana Savova
2013	—	`conf`	Active Learning for Phenotyping Tasks. RANLP (Medicine and Biology) Dmitriy Dligach, Timothy Miller, Guergana Savova
2013	Misc	`conf`	Automatic Prediction of Rheumatoid Arthritis Disease Activity from the Electronic Medical Records. AMIA Chen Lin, Elizabeth W. Karlson, Helena Canhão, Timothy A. Miller, Dmitriy Dligach, Pei J. Chen, Raúl N. Pérez, Yuanyuan Shen, Michael E. Weinblatt, Nancy A. Shadick, Robert M. Plenge, Guergana Savova
2013	Misc	`conf`	Discovering Body Site and Severity Modifiers in Clinical Texts. AMIA Dmitriy Dligach, Timothy A. Miller, Guergana Savova
2013	—	`conf`	Discovering Temporal Narrative Containers in Clinical Text. BioNLP@ACL Timothy Miller, Steven Bethard, Dmitriy Dligach, Sameer Pradhan, Chen Lin, Guergana Savova
2013	J	`jnl`	Improved de-identification of physician notes through integrative modeling of both public and private medical text. BMC Medical Informatics Decis. Mak. Andrew J. McMurry, Britt Fitch, Guergana Savova, Isaac S. Kohane, Ben Y. Reis
2013	J	`jnl`	Large-scale evaluation of automated clinical note de-identification and its impact on information extraction. J. Am. Medical Informatics Assoc. Louise Deléger, Katalin Molnár, Guergana Savova, Fei Xia, Todd Lingren, Qi Li, Keith Marsolo, Anil G. Jegga, Megan Kaiser, Laura Stoutenborough, Imre Solti
2013	Misc	`conf`	Panel: Shared Resources, Shared Code, and Shared Activities in Clinical Natural Language Processing. AMIA Guergana Savova, Wendy Webber Chapman, Noemie Elhadad, Martha Palmer
2013	—	`ed.`	Proceedings of the Workshop on NLP for Medicine and Biology associated with RANLP 2013, Hissar, Bulgaria, September 13, 2013 RANLP (Medicine and Biology) Guergana Savova, Kevin Bretonnel Cohen, Galia Angelova
2012	—	`conf`	Active Learning for Coreference Resolution. BioNLP@HLT-NAACL Timothy A. Miller, Dmitriy Dligach, Guergana Savova
2009	—	`ed.`	Proceedings of the Workshop on Biomedical Information Extraction@RANLP 2009, Borovets, Bulgaria, September 18, 2009 BiomedicalIE@RANLP Guergana Savova, Vangelis Karkaletsis, Galia Angelova
2009	Misc	`conf`	Towards Temporal Relation Discovery from the Clinical Narrative. AMIA Guergana Savova, Steven Bethard, William F. Styler IV, James H. Martin, Martha Palmer, James J. Masanz, Wayne H. Ward
2008	—	`conf`	Conditional Random Fields and Support Vector Machines for Disorder Named Entity Recognition in Clinical Texts. BioNLP Dingcheng Li, Guergana Savova, Karin Kipper Schuler
2006	Misc	`conf`	Building and Evaluating Annotated Corpora for Medical NLP Systems. AMIA Philip V. Ogren, Guergana Savova, James D. Buntrock, Christopher G. Chute
2005	Misc	`conf`	Frame Semantics and the Domain of Functioning, Disability and Health. AMIA Guergana Savova, Marcelline R. Harris, Serguei Pakhomov, Christopher G. Chute
2005	—	`conf`	Using Volunteers to Annotate Biomedical Corpora for Anaphora Resolution. AAAI Spring Symposium: Knowledge Collection from Volunteer Contributors Shana Watters, Brian McInnes, David McKoskey, Tim Miller, Daniel Boley, Maria L. Gini, William Schuler, A. Polukeyeva, Jeanette K. Gundel, Sergey V. Pakhomov, Guergana Savova
2003	Misc	`conf`	Testing the Generalizability of the ISO Model for Nursing Diagnoses. AMIA Marcelline R. Harris, Hyeoneui Kim, Lori Rhudy, Guergana Savova, Christopher G. Chute
2000	A	`conf`	Improving language model perplexity and recognition accuracy for medical dictations via within-domain interpolation with literal and semi-literal corpora. INTERSPEECH Guergana Savova, Michael Schonwetter, Sergey V. Pakhomov