Goro Terai

13 papers Journal 13
YearRankTypeTitle / Venue / Authors
2025 J jnl
Deep generative model of RNAs based on variational autoencoder with context-free grammar.
Bioinform.
Goro Terai, Kiyoshi Asai
2025 J jnl
PseudoknotVisualizer: Visualization of pseudoknots on three-dimensional RNA structures.
PLoS Comput. Biol.
Takumi Otagaki, Goro Terai, Kiyoshi Asai, Junichi Iwakiri
2020 J jnl
Finding the direct optimal RNA barrier energy and improving pathways with an arbitrary energy model.
Bioinform.
Hiroki Takizawa, Junichi Iwakiri, Goro Terai, Kiyoshi Asai
2017 J jnl
Evolutionary design of multiple genes encoding the same protein.
Bioinform.
Goro Terai, Satoshi Kamegai, Akito Taneda, Kiyoshi Asai
2016 J jnl
CDSfold: an algorithm for designing a protein-coding sequence with the most stable secondary structure.
Bioinform.
Goro Terai, Satoshi Kamegai, Kiyoshi Asai
2016 J jnl
Comprehensive prediction of lncRNA-RNA interactions in human transcriptome.
BMC Genom.
Goro Terai, Junichi Iwakiri, Tomoshi Kameda, Michiaki Hamada, Kiyoshi Asai
2015 J jnl
Ustiloxins, fungal cyclic peptides, are ribosomally synthesized in
Bioinform.
Takahiro Tsukui, Nozomi Nagano, Myco Umemura, Toshitaka Kumagai, Goro Terai, Masayuki Machida, Kiyoshi Asai
2011 J jnl
A detailed investigation of accessibilities around target sites of siRNAs and miRNAs.
Bioinform.
Hisanori Kiryu, Goro Terai, Osamu Imamura, Hiroyuki Yoneyama, Kenji Suzuki, Kiyoshi Asai
2009 J jnl
The Functional RNA Database 3.0: databases to support mining and annotation of functional RNAs.
Nucleic Acids Res.
Toutai Mituyama, Kouichirou Yamada, Emi Hattori, Hiroaki Okida, Yukiteru Ono, Goro Terai, Aya Yoshizawa, Takashi Komori, Kiyoshi Asai
2008 J jnl
Software.ncrna.org: web servers for analyses of RNA sequences.
Nucleic Acids Res.
Kiyoshi Asai, Hisanori Kiryu, Michiaki Hamada, Yasuo Tabei, Kengo Sato, Hiroshi Matsui, Yasubumi Sakakibara, Goro Terai, Toutai Mituyama
2007 J jnl
fRNAdb: a platform for mining/annotating functional RNA candidates from non-coding RNA sequences.
Nucleic Acids Res.
Taishin Kin, Kouichirou Yamada, Goro Terai, Hiroaki Okida, Yasuhiko Yoshinari, Yukiteru Ono, Aya Kojima, Yuki Kimura, Takashi Komori, Kiyoshi Asai
2004 J jnl
Predicting rules on organization of cis-regulatory elements, taking the order of elements into account.
Bioinform.
Goro Terai, Toshihisa Takagi
2001 J jnl
DBTBS: a database of Bacillus subtilis promoters and transcription factors.
Nucleic Acids Res.
Takahiro Ishii, Ken-ichi Yoshida, Goro Terai, Yasutaro Fujita, Kenta Nakai