Gordon Broderick

17 papers C 3Journal 7Unranked 7
YearRankTypeTitle / Venue / Authors
2025 J jnl
GPU-accelerated Modeling of Biological Regulatory Networks.
CoRR
Joyce Reimer, Pranta Saha, Chris Chen, Neeraj Dhar, Brook Byrns, Steven Rayan, Gordon Broderick
2025 J jnl
Identifying Protein Co-regulatory Network Logic by Solving B-SAT Problems through Gate-based Quantum Computing.
CoRR
Aspen Erlandsson Brisebois, Jason Broderick, Zahed Khatooni, Heather L. Wilson, Steven Rayan, Gordon Broderick
2025 J jnl
Reconstructing Biological Pathways by Applying Selective Incremental Learning to (Very) Small Language Models.
CoRR
Pranta Saha, Joyce Reimer, Brook Byrns, Connor Burbridge, Neeraj Dhar, Jeffrey Chen, Steven Rayan, Gordon Broderick
2024 — conf
Incorporating Regional Brain Connectivity Profiles into the Inference of Exposure-Related Neurobehavioral Burden in Explosive Ordnance Disposal Veterans.
HCI (27)
Jeffrey M. Page, Hyuk Oh, Thomas Chacko, Immanuel Babu Henry Samuel, Calvin Lu, Robert D. Forsten, Matthew J. Reinhard, Michelle E. Costanzo, Gordon Broderick
2024 — conf
Mapping Signaling Mechanisms in Neurotoxic Injury from Sparsely Sampled Data Using a Constraint Satisfaction Framework.
HCI (11)
Jeffrey M. Page, Kimberly A. Kelly, Lindsay T. Michalovicz, James P. O'Callahghan, Shichen Shen, Xiaoyu Zhu, Jun Qu, Jonathan Boyd, Gordon Broderick
2022 — conf
Refinement of Biological Regulatory Graphs using Functional Enrichment.
BIBM
Jeffrey M. Page, Matthew C. Morris, Gary R. Skuse, Gordon Broderick
2021 — conf
High Fidelity Modeling of Pulse Dynamics using Logic Networks.
BIBM
Cole A. Lyman, Matthew C. Morris, Spencer Richman, Hong Bao Cao, Antony Scerri, Chris Cheadle, Gordon Broderick
2021 — conf
Leveraging Drug-Target Interaction Data for the Translation of Computational Models into Clinically Actionable Interventions.
BIBM
Spencer C. Richmanz, Cole A. Lyman, Matthew C. Morris, Hongbao Cao, Anastasia Nesterovay, Anton Yuryevy, Chris Cheadle, Gordon Broderick
2020 C conf
Hacking the Immune Response to Infection in Chronic Obstructive Pulmonary Disease.
BIBE
Matthew C. Morris, Spencer Richman, Cole A. Lyman, Jun Qu, Manoj J. Mammen, Sanjay Sethi, Gordon Broderick
2020 C conf
Predicting the Immune Response to Repurposed Drugs in Coronavirus-induced Cytokine Storm.
BIBE
Matthew C. Morris, Cole A. Lyman, Spencer Richman, Hong Bao Cao, Chris Cheadle, Gordon Broderick
2019 — conf
Feedback Regulation of Immune Response to Maximum Exercise in Gulf War Illness.
BCB
Cole A. Lyman, Mark J. Clement, Travis J. A. Craddock, Mary Fletcher, Nancy G. Klimas, Gordon Broderick
2019 — conf
When the How Outweighs the What: the Pivotal Importance of Context.
BIBM
Cole A. Lyman, Connor Anderson, Matthew C. Morris, Umesh K. Nandal, Marianna J. Martindale, Mark J. Clement, Gordon Broderick
2018 J jnl
High-fidelity discrete modeling of the HPA axis: a study of regulatory plasticity in biology.
BMC Syst. Biol.
Hooman Sedghamiz, Matthew C. Morris, Travis J. A. Craddock, L. Darrell Whitley, Gordon Broderick
2017 C conf
Selecting Optimal Models Based on Efficiency and Robustness in Multi-valued Biological Networks.
BIBE
Hooman Sedghamiz, Wenxiang Chen, Mark Rice, L. Darrell Whitley, Gordon Broderick
2009 J jnl
Model-Based Therapeutic Correction of Hypothalamic-Pituitary-Adrenal Axis Dysfunction.
PLoS Comput. Biol.
Amos Ben-Zvi, Suzanne D. Vernon, Gordon Broderick
2008 J jnl
Extraction of elementary rate constants from global network analysis of E. coli central metabolism.
BMC Syst. Biol.
Jiao Zhao, Douglas Ridgway, Gordon Broderick, Andriy Kovalenko, Michael J. Ellison
2004 J jnl
A life-like virtual cell membrane using discrete automata.
Silico Biol.
Gordon Broderick, Melania Rúaini, Eugene Chan, Michael J. Ellison