Giuseppe Narzisi

21 papers Misc 1Journal 10Unranked 8

Year	Rank	Type	Title / Venue / Authors
2021	J	`jnl`	Somatic variant analysis of linked-reads sequencing data with Lancet. Bioinform. Rajeeva Musunuri, Kanika Arora, André Corvelo, Minita Shah, Jennifer Shelton, Michael C. Zody, Giuseppe Narzisi
2020	J	`jnl`	A crowdsourced set of curated structural variants for the human genome. PLoS Comput. Biol. Lesley M. Chapman, Noah Spies, Patrick Pai, Chun Shen Lim, Andrew Carroll, Giuseppe Narzisi, Christopher M. Watson, Christos Proukakis, Wayne E. Clarke, Naoki Nariai, Eric T. Dawson, Garan Jones, Daniel J. Blankenberg, Christian Brueffer, Chunlin Xiao, Sree Rohit Raj Kolora, Noah Alexander, Paul Wolujewicz, Azza E. Ahmed, Graeme Smith, Saadlee Shehreen, Aaron M. Wenger, Marc Salit, Justin M. Zook
2019	J	`jnl`	ExpansionHunter: a sequence-graph-based tool to analyze variation in short tandem repeat regions. Bioinform. Egor Dolzhenko, Viraj Deshpande, Felix Schlesinger, Peter Krusche, Roman Petrovski, Sai Chen, Dorothea Emig-Agius, Andrew Gross, Giuseppe Narzisi, Brett Bowman, Konrad Scheffler, Joke J. F. A van Vugt, Courtney E. French, Alba Sanchis-Juan, Kristina Ibáñez, Arianna Tucci, Bryan R. Lajoie, Jan H. Veldink, F. Lucy Raymond, Ryan J. Taft, David R. Bentley, Michael A. Eberle
2014	—	`conf`	On Algorithmic Complexity of Biomolecular Sequence Assembly Problem. AlCoB Giuseppe Narzisi, Bud Mishra, Michael C. Schatz
2014	J	`jnl`	The contribution of Nat. Ivan Iossifov, Brian J. O'Roak, Stephan J. Sanders, Michael Ronemus, Niklas Krumm, Dan Levy, Holly A. Stessman, Kali T. Witherspoon, Laura Vives, Karynne E. Patterson, Joshua D. Smith, Bryan Paeper, Deborah A. Nickerson, Jeanselle Dea, Shan Dong, Luis E. Gonzalez, Jeffrey D. Mandell, Shrikant M. Mane, Michael T. Murtha, Catherine A. Sullivan, Michael F. Walker, Zainulabedin Waqar, Liping Wei, A. Jeremy Willsey, Boris Yamrom, Yoon-ha Lee, Ewa Grabowska, Ertugrul Dalkic, Zi-Hua Wang, Steven Marks, Peter Andrews, Anthony Leotta, Jude Kendall, Inessa Hakker, Julie Rosenbaum, Beicong Ma, Linda Rodgers, Jennifer Troge, Giuseppe Narzisi, Seungtai Yoon, Michael C. Schatz, Kenny Ye, W. Richard McCombie, Jay Shendure, Evan E. Eichler, Matthew W. State, Michael Wigler
2013	J	`jnl`	Hawkeye and AMOS: visualizing and assessing the quality of genome assemblies. Briefings Bioinform. Michael C. Schatz, Adam M. Phillippy, Daniel D. Sommer, Arthur L. Delcher, Daniela Puiu, Giuseppe Narzisi, Steven L. Salzberg, Mihai Pop
2012	J	`jnl`	Clonal selection: an immunological algorithm for global optimization over continuous spaces. J. Glob. Optim. Mario Pavone, Giuseppe Narzisi, Giuseppe Nicosia
2012	J	`jnl`	Reevaluating Assembly Evaluations with Feature Response Curves: GAGE and Assemblathons CoRR Francesco Vezzi, Giuseppe Narzisi, Bud Mishra
2011	—	`—`	Scoring-and-Unfolding Trimmed Tree Assembler: Algorithms for Assembling Genome Sequences Accurately and Efficiently. Giuseppe Narzisi
2011	J	`jnl`	Scoring-and-unfolding trimmed tree assembler: concepts, constructs and comparisons. Bioinform. Giuseppe Narzisi, Bud Mishra
2011	J	`jnl`	TotalReCaller: improved accuracy and performance via integrated alignment and base-calling. Bioinform. Fabian Menges, Giuseppe Narzisi, Bud Mishra
2008	—	`ch.`	Computational Studies of Peptide and Protein Structure Prediction Problems via Multiobjective Evolutionary Algorithms. Multiobjective Problem Solving from Nature Vincenzo Cutello, Giuseppe Narzisi, Giuseppe Nicosia
2008	Misc	`conf`	Modeling and simulation of e-mail social networks: A new stochastic agent-based approach. WSC Fabian Menges, Bud Mishra, Giuseppe Narzisi
2007	J	`jnl`	Determination of protein structure and dynamics combining immune algorithms and pattern search methods. Nat. Comput. Angelo Marcello Anile, Vincenzo Cutello, Giuseppe Narzisi, Giuseppe Nicosia, Salvatore Spinella
2007	—	`conf`	Resilience in the Face of Disaster: Accounting for Varying Disaster Magnitudes, Resource Topologies, and (Sub)Population Distributions in the PLAN C Emergency Planning Tool. HoloMAS Giuseppe Narzisi, Joshua S. Mincer, Silas Smith, Bud Mishra
2006	—	`conf`	Multi-objective evolutionary optimization of agent-based models: An application to emergency response planning. Computational Intelligence Giuseppe Narzisi, Venkatesh Mysore, Bud Mishra
2005	—	`conf`	A Class of Pareto Archived Evolution Strategy Algorithms Using Immune Inspired Operators for Ab-Initio Protein Structure Prediction. EvoWorkshops Vincenzo Cutello, Giuseppe Narzisi, Giuseppe Nicosia
2005	—	`conf`	An Immunological Algorithm for Global Numerical Optimization. Artificial Evolution Vincenzo Cutello, Giuseppe Narzisi, Giuseppe Nicosia, Mario Pavone
2005	—	`conf`	Clonal Selection Algorithms: A Comparative Case Study Using Effective Mutation Potentials. ICARIS Vincenzo Cutello, Giuseppe Narzisi, Giuseppe Nicosia, Mario Pavone
2005	—	`conf`	Lipschitzian Pattern Search and Immunological Algorithm with Quasi-Newton Method for the Protein Folding Problem: An Innovative Multistage Approach. WIRN/NAIS Angelo Marcello Anile, Vincenzo Cutello, Giuseppe Narzisi, Giuseppe Nicosia, Salvatore Spinella
2004	—	`conf`	How to Escape Traps Using Clonal Selection Algorithms. ICINCO (1) Vincenzo Cutello, Giuseppe Narzisi, Giuseppe Nicosia, Mario Pavone, Giuseppe Sorace