Giovanni Birolo

30 papers B 1Journal 19Unranked 10
YearRankTypeTitle / Venue / Authors
2025 J jnl
Beyond Cox Models: Assessing the Performance of Machine-Learning Methods in Non-Proportional Hazards and Non-Linear Survival Analysis.
CoRR
Ivan Rossi, Flavio Sartori, Cesare Rollo, Giovanni Birolo, Piero Fariselli, Tiziana Sanavia
2025 J jnl
Beyond Cox models: Assessing the performance of machine-learning methods in non-proportional hazards and non-linear survival analysis.
Comput. Biol. Medicine
Giovanni Birolo, Ivan Rossi, Flavio Sartori, Cesare Rollo, Piero Fariselli, Tiziana Sanavia
2025 J jnl
Neural Diffusion Processes for Physically Interpretable Survival Prediction.
CoRR
Alessio Cristofoletto, Cesare Rollo, Giovanni Birolo, Piero Fariselli
2025 J jnl
SurvHive: a package to consistently access multiple survival-analysis packages.
CoRR
Giovanni Birolo, Ivan Rossi, Flavio Sartori, Cesare Rollo, Tiziana Sanavia, Piero Fariselli
2025 J jnl
VAE-Surv: A novel approach for genetic-based clustering and prognosis prediction in myelodysplastic syndromes.
Comput. Methods Programs Biomed.
Cesare Rollo, Corrado Pancotti, Flavio Sartori, Isabella Caranzano, Saverio D'Amico, Luciana Carota, Francesco Casadei, Giovanni Birolo, Luca Lanino, Elisabetta Sauta, Gianluca Asti, Alessandro Buizza, Mattia Delleani, Elena Zazzetti, Marilena Bicchieri, Giulia Maggioni, Pierre Fenaux, Uwe Platzbecker, Maria Diez-Campelo, Torsten Haferlach, Gastone C. Castellani, Matteo Giovanni Della Porta, Piero Fariselli, Tiziana Sanavia
2024 — conf
ALSFRS-R Score Prediction for Amyotrophic Lateral Sclerosis.
CLEF (Working Notes)
Guido Barducci, Flavio Sartori, Giovanni Birolo, Tiziana Sanavia, Piero Fariselli
2024 — conf
Intelligent Disease Progression Prediction: Overview of iDPP@CLEF 2024.
CLEF (2)
Giovanni Birolo, Pietro Bosoni, Guglielmo Faggioli, Helena Aidos, Roberto Bergamaschi, Paola Cavalla, Adriano Chiò, Arianna Dagliati, Mamede de Carvalho, Giorgio Maria Di Nunzio, Piero Fariselli, Jose Manuel García Dominguez, Marta Gromicho, Alessandro Guazzo, Enrico Longato, Sara C. Madeira, Umberto Manera, Stefano Marchesin, Laura Menotti, Gianmaria Silvello, Eleonora Tavazzi, Erica Tavazzi, Isotta Trescato, Martina Vettoretti, Barbara Di Camillo, Nicola Ferro
2024 J jnl
MUSE-XAE: MUtational Signature Extraction with eXplainable AutoEncoder enhances tumour types classification.
Bioinform.
Corrado Pancotti, Cesare Rollo, Francesco Codicè, Giovanni Birolo, Piero Fariselli, Tiziana Sanavia
2024 — conf
Overview of iDPP@CLEF 2024: The Intelligent Disease Progression Prediction Challenge.
CLEF (Working Notes)
Giovanni Birolo, Pietro Bosoni, Guglielmo Faggioli, Helena Aidos, Roberto Bergamaschi, Paola Cavalla, Adriano Chiò, Arianna Dagliati, Mamede de Carvalho, Giorgio Maria Di Nunzio, Piero Fariselli, Jose Manuel García Dominguez, Marta Gromicho, Alessandro Guazzo, Enrico Longato, Sara C. Madeira, Umberto Manera, Stefano Marchesin, Laura Menotti, Gianmaria Silvello, Eleonora Tavazzi, Erica Tavazzi, Isotta Trescato, Martina Vettoretti, Barbara Di Camillo, Nicola Ferro
2024 J jnl
Parallel intersection counting on shared-memory multiprocessors and GPUs.
Future Gener. Comput. Syst.
Moreno Marzolla, Giovanni Birolo, Gabriele D'Angelo, Piero Fariselli
2024 J jnl
SYNDSURV: A simple framework for survival analysis with data distributed across multiple institutions.
Comput. Biol. Medicine
Cesare Rollo, Corrado Pancotti, Giovanni Birolo, Ivan Rossi, Tiziana Sanavia, Piero Fariselli
2023 J jnl
Artificial intelligence and statistical methods for stratification and prediction of progression in amyotrophic lateral sclerosis: A systematic review.
Artif. Intell. Medicine
Erica Tavazzi, Enrico Longato, Martina Vettoretti, Helena Aidos, Isotta Trescato, Chiara Roversi, Andreia S. Martins, Eduardo N. Castanho, Ruben Branco, Diogo F. Soares, Alessandro Guazzo, Giovanni Birolo, Daniele Pala, Pietro Bosoni, Adriano Chiò, Umberto Manera, Mamede de Carvalho, Bruno Miranda, Marta Gromicho, Inês Alves, Riccardo Bellazzi, Arianna Dagliati, Piero Fariselli, Sara C. Madeira, Barbara Di Camillo
2023 J jnl
How good Neural Networks interpretation methods really are? A quantitative benchmark.
CoRR
Antoine Passemiers, Pietro Folco, Daniele Raimondi, Giovanni Birolo, Yves Moreau, Piero Fariselli
2023 — conf
Intelligent Disease Progression Prediction: Overview of iDPP@CLEF 2023.
CLEF
Guglielmo Faggioli, Alessandro Guazzo, Stefano Marchesin, Laura Menotti, Isotta Trescato, Helena Aidos, Roberto Bergamaschi, Giovanni Birolo, Paola Cavalla, Adriano Chiò, Arianna Dagliati, Mamede de Carvalho, Giorgio Maria Di Nunzio, Piero Fariselli, Jose Manuel García Dominguez, Marta Gromicho, Enrico Longato, Sara C. Madeira, Umberto Manera, Gianmaria Silvello, Eleonora Tavazzi, Erica Tavazzi, Martina Vettoretti, Barbara Di Camillo, Nicola Ferro
2023 — conf
Multiple Sclerosis Survival Prediction Results from DSM-COMPBIO UNITO.
CLEF (Working Notes)
Ivan Rossi, Giovanni Birolo, Piero Fariselli
2023 — conf
Overview of iDPP@CLEF 2023: The Intelligent Disease Progression Prediction Challenge.
CLEF (Working Notes)
Guglielmo Faggioli, Alessandro Guazzo, Stefano Marchesin, Laura Menotti, Isotta Trescato, Helena Aidos, Roberto Bergamaschi, Giovanni Birolo, Paola Cavalla, Adriano Chiò, Arianna Dagliati, Mamede de Carvalho, Giorgio Maria Di Nunzio, Piero Fariselli, Jose Manuel García Dominguez, Marta Gromicho, Enrico Longato, Sara C. Madeira, Umberto Manera, Gianmaria Silvello, Eleonora Tavazzi, Erica Tavazzi, Martina Vettoretti, Barbara Di Camillo, Nicola Ferro
2023 J jnl
Recombulator-X: A fast and user-friendly tool for estimating X chromosome recombination rates in forensic genetics.
PLoS Comput. Biol.
Serena Aneli, Piero Fariselli, Elena Chierto, Carla Bini, Carlo Robino, Giovanni Birolo
2022 J jnl
BamToCov: an efficient toolkit for sequence coverage calculations.
Bioinform.
Giovanni Birolo, Andrea Telatin
2022 J jnl
DDGun: an untrained predictor of protein stability changes upon amino acid variants.
Nucleic Acids Res.
Ludovica Montanucci, Emidio Capriotti, Giovanni Birolo, Silvia Benevenuta, Corrado Pancotti, Dennis Lal, Piero Fariselli
2022 — conf
Intelligent Disease Progression Prediction: Overview of iDPP@CLEF 2022.
CLEF
Alessandro Guazzo, Isotta Trescato, Enrico Longato, Enidia Hazizaj, Dennis Dosso, Guglielmo Faggioli, Giorgio Maria Di Nunzio, Gianmaria Silvello, Martina Vettoretti, Erica Tavazzi, Chiara Roversi, Piero Fariselli, Sara C. Madeira, Mamede de Carvalho, Marta Gromicho, Adriano Chiò, Umberto Manera, Arianna Dagliati, Giovanni Birolo, Helena Aidos, Barbara Di Camillo, Nicola Ferro
2022 — conf
Multi-Event Survival Prediction for Amyotrophic Lateral Sclerosis.
CLEF (Working Notes)
Corrado Pancotti, Giovanni Birolo, Tiziana Sanavia, Cesare Rollo, Piero Fariselli
2022 — conf
Overview of iDPP@CLEF 2022: The Intelligent Disease Progression Prediction Challenge.
CLEF (Working Notes)
Alessandro Guazzo, Isotta Trescato, Enrico Longato, Enidia Hazizaj, Dennis Dosso, Guglielmo Faggioli, Giorgio Maria Di Nunzio, Gianmaria Silvello, Martina Vettoretti, Erica Tavazzi, Chiara Roversi, Piero Fariselli, Sara C. Madeira, Mamede de Carvalho, Marta Gromicho, Adriano Chiò, Umberto Manera, Arianna Dagliati, Giovanni Birolo, Helena Aidos, Barbara Di Camillo, Nicola Ferro
2022 J jnl
Predicting protein stability changes upon single-point mutation: a thorough comparison of the available tools on a new dataset.
Briefings Bioinform.
Corrado Pancotti, Silvia Benevenuta, Giovanni Birolo, Virginia Alberini, Valeria Repetto, Tiziana Sanavia, Emidio Capriotti, Piero Fariselli
2020 J jnl
covtobed: a simple and fast tool to extract coverage tracks from BAM files.
J. Open Source Softw.
Giovanni Birolo, Andrea Telatin
2017 J jnl
QueryOR: a comprehensive web platform for genetic variant analysis and prioritization.
BMC Bioinform.
Loris Bertoldi, Claudio Forcato, Nicola Vitulo, Giovanni Birolo, Fabio De Pascale, Erika Feltrin, Riccardo Schiavon, Franca Anglani, Susanna Negrisolo, Alessandra Zanetti, Francesca D'Avanzo, Rosella Tomanin, Georgine Faulkner, Alessandro Vezzi, Giorgio Valle
2013 J jnl
A Monadic Framework for Interactive Realizability.
CoRR
Giovanni Birolo
2013 J jnl
A Witness Extraction Technique by Proof Normalization Based on Interactive Realizability
CoRR
Giovanni Birolo
2013 J jnl
Interactive Realizability, Monads and Witness Extraction
CoRR
Giovanni Birolo
2013 — conf
Interpreting a Classical Geometric Proof with Interactive Realizability.
COS
Giovanni Birolo
2013 B conf
Realizability and Strong Normalization for a Curry-Howard Interpretation of HA + EM1.
CSL
Federico Aschieri, Stefano Berardi, Giovanni Birolo