Gilchan Park

28 papers A* 1B 3Misc 1Journal 17Unranked 5
YearRankTypeTitle / Venue / Authors
2025 J jnl
Comparative Performance Evaluation of Large Language Models for Extracting Molecular Interactions and Pathway Knowledge.
J. Comput. Biol.
Gilchan Park, Byung-Jun Yoon, Xihaier Luo, Vanessa López-Marrero, Shinjae Yoo, Shantenu Jha
2025 — conf
Enhancing Future Link Prediction in Quantum Computing Semantic Networks through LLM-Initiated Node Features.
COLING (Industry)
Gilchan Park, Paul Baity, Byung-Jun Yoon, Adolfy Hoisie
2025 A* conf
Pareto Prompt Optimization.
ICLR
Guang Zhao, Byung-Jun Yoon, Gilchan Park, Shantenu Jha, Shinjae Yoo, Xiaoning Qian
2025 J jnl
Uncertainty-Aware Adaptation of Large Language Models for Protein-Protein Interaction Analysis.
CoRR
Sanket R. Jantre, Tianle Wang, Gilchan Park, Kriti Chopra, Nicholas Jeon, Xiaoning Qian, Nathan M. Urban, Byung-Jun Yoon
2024 J jnl
Density estimation via measure transport: Outlook for applications in the biological sciences.
Stat. Anal. Data Min.
Vanessa López-Marrero, Patrick R. Johnstone, Gilchan Park, Xihaier Luo
2024 J jnl
Enhancing Future Link Prediction in Quantum Computing Semantic Networks through LLM-Initiated Node Features.
CoRR
Gilchan Park, Paul Baity, Byung-Jun Yoon, Adolfy Hoisie
2024 — conf
Evaluating Large Language Models for Predicting Protein Behavior under Radiation Exposure and Disease Conditions.
BioNLP@ACL
Ryan Engel, Gilchan Park
2024 J jnl
Extracting Protein-Protein Interactions (PPIs) from Biomedical Literature using Attention-based Relational Context Information.
CoRR
Gilchan Park, Sean McCorkle, Carlos Soto, Ian Blaby, Shinjae Yoo
2024 — conf
Leveraging LLMs and Web-based Visualizations for Profiling Bacterial Host Organisms and Genetic Toolboxes.
BioNLP@ACL
Gilchan Park, Vivek Mutalik, Christopher Neely, Carlos Soto, Shinjae Yoo, Paramvir S. Dehal
2024 J jnl
Parallel hybrid quantum-classical machine learning for kernelized time-series classification.
Quantum Mach. Intell.
Jack S. Baker, Gilchan Park, Kwangmin Yu, Ara Ghukasyan, Oktay Göktas, Santosh Kumar Radha
2024 J jnl
Pathway-based analyses of gene expression profiles at low doses of ionizing radiation.
Frontiers Bioinform.
Xihaier Luo, Seyednami Niyakan, Patrick R. Johnstone, Sean McCorkle, Gilchan Park, Vanessa López-Marrero, Shinjae Yoo, Edward R. Dougherty, Xiaoning Qian, Francis J. Alexander, Shantenu Jha, Byung-Jun Yoon
2023 — conf
Automated Extraction of Molecular Interactions and Pathway Knowledge using Large Language Model, Galactica: Opportunities and Challenges.
BioNLP@ACL
Gilchan Park, Byung-Jun Yoon, Xihaier Luo, Vanessa López-Marrero, Patrick R. Johnstone, Shinjae Yoo, Francis J. Alexander
2023 J jnl
Comparative Performance Evaluation of Large Language Models for Extracting Molecular Interactions and Pathway Knowledge.
CoRR
Gilchan Park, Byung-Jun Yoon, Xihaier Luo, Vanessa López-Marrero, Patrick R. Johnstone, Shinjae Yoo, Francis J. Alexander
2023 J jnl
Comprehensive analysis of gene expression profiles to radiation exposure reveals molecular signatures of low-dose radiation response.
CoRR
Xihaier Luo, Sean McCorkle, Gilchan Park, Vanessa López-Marrero, Shinjae Yoo, Edward R. Dougherty, Xiaoning Qian, Francis J. Alexander, Byung-Jun Yoon
2023 J jnl
Density Estimation via Measure Transport: Outlook for Applications in the Biological Sciences.
CoRR
Vanessa López-Marrero, Patrick R. Johnstone, Gilchan Park, Xihaier Luo
2023 J jnl
Quantum multi-programming for Grover's search.
Quantum Inf. Process.
Gilchan Park, Kun Zhang, Kwangmin Yu, Vladimir E. Korepin
2022 — conf
Comprehensive analysis of gene expression profiles to radiation exposure reveals molecular signatures of low-dose radiation response.
BIBM
Xihaier Luo, Sean McCorkle, Gilchan Park, Vanessa López-Marrero, Shinjae Yoo, Edward R. Dougherty, Xiaoning Qian, Francis J. Alexander, Byung-Jun Yoon
2022 B conf
Extracting Protein-Protein Interactions (PPIs) from Biomedical Literature using Attention-based Relational Context Information.
IEEE Big Data
Gilchan Park, Sean McCorkle, Carlos Soto, Ian Blaby, Shinjae Yoo
2022 J jnl
Figure Descriptive Text Extraction using Ontological Representation.
CoRR
Gilchan Park, Julia Rayz, Line Pouchard
2021 J jnl
Advances in scientific literature mining for interpreting materials characterization.
Mach. Learn. Sci. Technol.
Gilchan Park, Line Pouchard
2021 J jnl
Towards Text-based Phishing Detection.
CoRR
Gilchan Park, Julia M. Taylor
2021 J jnl
Towards The Automatic Coding of Medical Transcripts to Improve Patient-Centered Communication.
CoRR
Gilchan Park, Julia Taylor Rayz, Cleveland G. Shields
2020 Misc conf
Figure Descriptive Text Extraction Using Ontological Representation.
FLAIRS
Gilchan Park, Julia Taylor Rayz, Line Pouchard
2020 J jnl
Supercomputer-Based Ensemble Docking Drug Discovery Pipeline with Application to Covid-19.
J. Chem. Inf. Model.
Atanu Acharya, Rupesh Agarwal, Matthew B. Baker, Jérôme Baudry, Debsindhu Bhowmik, Swen Böhm, Kendall G. Byler, Sam Yen-Chi Chen, Leighton Coates, Connor J. Cooper, Omar Demerdash, Isabella Daidone, John D. Eblen, Sally R. Ellingson, Stefano Forli, Jens Glaser, James C. Gumbart, John Gunnels, Oscar R. Hernandez, Stephan Irle, Daniel W. Kneller, Andrey Kovalevsky, Jeffrey M. Larkin, Travis J. Lawrence, Scott LeGrand, Shih-Hsien Liu, Julie C. Mitchell, Gilchan Park, Jerry M. Parks, Anna Pavlova, Loukas Petridis, Duncan Poole, Line Pouchard, Arvind Ramanathan, David M. Rogers, Diogo Santos-Martins, Aaron Scheinberg, Ada Sedova, Yue Shen, Jeremy C. Smith, Micholas Dean Smith, Carlos Soto, Aristides Tsaris, Mathialakan Thavappiragasam, Andreas F. Tillack, Josh Vincent Vermaas, Van Quan Vuong, Junqi Yin, Shinjae Yoo, Mai Zahran, Laura Zanetti Polzi
2018 B conf
Ontological Detection of Phishing Emails.
SMC
Gilchan Park, Julia Rayz
2018 — —
Towards Ontology-Based Phishing Detection
Gilchan Park
2015 J jnl
Using Syntactic Features for Phishing Detection.
CoRR
Gilchan Park, Julia M. Taylor
2014 B conf
Comparing machine and human ability to detect phishing emails.
SMC
Gilchan Park, Lauren M. Stuart, Julia M. Taylor, Victor Raskin