Gergely Csaba

14 papers C 1Journal 12
YearRankTypeTitle / Venue / Authors
2021 J jnl
Toward a gold standard for benchmarking gene set enrichment analysis.
Briefings Bioinform.
Ludwig Geistlinger, Gergely Csaba, Mara Santarelli, Marcel Ramos, Lucas Schiffer, Nitesh Turaga, Charity W. Law, Sean Davis, Vincent J. Carey, Martin Morgan, Ralf Zimmer, Levi Waldron
2019 J jnl
Comparison of six breast cancer classifiers using qPCR.
Bioinform.
Evi Berchtold, Martina Vetter, Melanie Gündert, Gergely Csaba, Christine Fathke, Susanne E. Ulbrich, Christoph Thomssen, Ralf Zimmer, Eva J. Kantelhardt
2019 J jnl
YESdb: integrative analysis of environmental stress in yeast.
Database J. Biol. Databases Curation
Evi Berchtold, Gergely Csaba, Ralf Zimmer
2017 J jnl
RelExplain - integrating data and networks to explain biological processes.
Bioinform.
Evi Berchtold, Gergely Csaba, Ralf Zimmer
2016 J jnl
Bioconductor's EnrichmentBrowser: seamless navigation through combined results of set- & network-based enrichment analysis.
BMC Bioinform.
Ludwig Geistlinger, Gergely Csaba, Ralf Zimmer
2015 J jnl
ContextMap 2: fast and accurate context-based RNA-seq mapping.
BMC Bioinform.
Thomas Bonfert, Evelyn Kirner, Gergely Csaba, Ralf Zimmer, Caroline C. Friedel
2013 — —
Context based bioinformatics.
Gergely Csaba
2012 J jnl
A context-based approach to identify the most likely mapping for RNA-seq experiments.
BMC Bioinform.
Thomas Bonfert, Gergely Csaba, Ralf Zimmer, Caroline C. Friedel
2011 J jnl
From sets to graphs: towards a realistic enrichment analysis of transcriptomic systems.
Bioinform.
Ludwig Geistlinger, Gergely Csaba, Robert Küffner, Nicola J. Mulder, Ralf Zimmer
2010 J jnl
Vorescore - fold recognition improved by rescoring of protein structure models.
Bioinform.
Gergely Csaba, Ralf Zimmer
2010 J jnl
miRSel: Automated extraction of associations between microRNAs and genes from the biomedical literature.
BMC Bioinform.
Haroon Naeem, Robert Küffner, Gergely Csaba, Ralf Zimmer
2009 J jnl
Algorithmische Systembiologie mit Petrinetzen - Von qualitativen zu quantitativen Systemmodellen.
Inform. Spektrum
Fabian Birzele, Gergely Csaba, Florian Erhard, Caroline C. Friedel, Robert Küffner, Tobias Petri, Lukas Windhager, Ralf Zimmer
2008 C conf
Protein structure alignment considering phenotypic plasticity.
ECCB
Gergely Csaba, Fabian Birzele, Ralf Zimmer
2007 J jnl
Vorolign - fast structural alignment using Voronoi contacts.
Bioinform.
Fabian Birzele, Jan E. Gewehr, Gergely Csaba, Ralf Zimmer