Genki Terashi

15 papers Journal 9Unranked 4
YearRankTypeTitle / Venue / Authors
2023 J jnl
Enhancing cryo-EM maps with 3D deep generative networks for assisting protein structure modeling.
Bioinform.
Sai Raghavendra Maddhuri Venkata Subramaniya, Genki Terashi, Daisuke Kihara
2021 J jnl
Efficient Flexible Fitting Refinement with Automatic Error Fixing for De Novo Structure Modeling from Cryo-EM Density Maps.
J. Chem. Inf. Model.
Takaharu Mori, Genki Terashi, Daisuke Matsuoka, Daisuke Kihara, Yuji Sugita
2021 J jnl
Protein contact map refinement for improving structure prediction using generative adversarial networks.
Bioinform.
Sai Raghavendra Maddhuri Venkata Subramaniya, Genki Terashi, Aashish Jain, Yuki Kagaya, Daisuke Kihara
2021 — conf
SHREC 2021: Surface-based Protein Domains Retrieval.
3DOR
Florent Langenfeld, Tunde Aderinwale, Charles Christoffer, Woong-Hee Shin, Genki Terashi, Xiao Wang, Daisuke Kihara, Halim Benhabiles, Karim Hammoudi, Adnane Cabani, Féryal Windal, Mahmoud Melkemi, Ekpo Otu, Reyer Zwiggelaar, David Hunter, Yonghuai Liu, Léa Sirugue, Huu-Nghia H. Nguyen, Tuan-Duy H. Nguyen, Vinh-Thuyen Nguyen-Truong, Danh Le, Hai-Dang Nguyen, Minh-Triet Tran, Matthieu Montès
2020 J jnl
MAINMASTseg: Automated Map Segmentation Method for Cryo-EM Density Maps with Symmetry.
J. Chem. Inf. Model.
Genki Terashi, Yuki Kagaya, Daisuke Kihara
2020 — ch.
Path-LZerD: Predicting Assembly Order of Multimeric Protein Complexes.
Protein-Protein Interaction Networks
Genki Terashi, Charles Christoffer, Daisuke Kihara
2020 J jnl
Protein docking model evaluation by 3D deep convolutional neural networks.
Bioinform.
Xiao Wang, Genki Terashi, Charles Christoffer, Mengmeng Zhu, Daisuke Kihara
2020 J jnl
SHREC 2020: Multi-domain protein shape retrieval challenge.
Comput. Graph.
Florent Langenfeld, Yuxu Peng, Yu-Kun Lai, Paul L. Rosin, Tunde Aderinwale, Genki Terashi, Charles Christoffer, Daisuke Kihara, Halim Benhabiles, Karim Hammoudi, Adnane Cabani, Féryal Windal, Mahmoud Melkemi, Andrea Giachetti, Stelios K. Mylonas, Apostolos Axenopoulos, Petros Daras, Ekpo Otu, Matthieu Montès
2019 — conf
Classification in Cryo-Electron Tomograms.
3DOR@Eurographics
Ilja Gubins, Gijs van der Schot, Remco C. Veltkamp, Friedrich Förster, Xuefeng Du, Xiangrui Zeng, Zhenxi Zhu, Lufan Chang, Min Xu, Emmanuel Moebel, Antonio Martínez-Sánchez, Charles Kervrann, Tuan Manh Lai, Xusi Han, Genki Terashi, Daisuke Kihara, Benjamin A. Himes, Xiaohua Wan, Jingrong Zhang, Shan Gao, Yu Hao, Zhilong Lv, Xiaohua Wan, Zhidong Yang, Zijun Ding, Xuefeng Cui, Fa Zhang
2019 — conf
Protein Shape Retrieval Contest.
3DOR@Eurographics
Florent Langenfeld, Apostolos Axenopoulos, Halim Benhabiles, Petros Daras, Andrea Giachetti, Xusi Han, Karim Hammoudi, Daisuke Kihara, Tuan Manh Lai, Haiguang Liu, Mahmoud Melkemi, Stelios K. Mylonas, Genki Terashi, Yufan Wang, Féryal Windal, Matthieu Montès
2019 — ch.
Study of the Variability of the Native Protein Structure.
Encyclopedia of Bioinformatics and Computational Biology (3)
Xusi Han, Woong-Hee Shin, Charles Christoffer, Genki Terashi, Lyman Monroe, Daisuke Kihara
2018 J jnl
Modeling the assembly order of multimeric heteroprotein complexes.
PLoS Comput. Biol.
Lenna X. Peterson, Yoichiro Togawa, Juan Esquivel-Rodríguez, Genki Terashi, Charles Christoffer, Amitava Roy, Woong-Hee Shin, Daisuke Kihara
2017 J jnl
Modeling disordered protein interactions from biophysical principles.
PLoS Comput. Biol.
Lenna X. Peterson, Amitava Roy, Charles Christoffer, Genki Terashi, Daisuke Kihara
2017 — conf
Protein Shape Retrieval.
3DOR@Eurographics
Na Song, Daniela Craciun, Charles Christoffer, Xusi Han, Daisuke Kihara, Guillaume Levieux, Matthieu Montès, Hong Qin, Pranjal Sahu, Genki Terashi, Haiguang Liu
2012 J jnl
LB3D: A Protein Three-Dimensional Substructure Search Program Based on the Lower Bound of a Root Mean Square Deviation Value.
J. Comput. Biol.
Genki Terashi, Tetsuo Shibuya, Mayuko Takeda-Shitaka