Gene J. Yu

21 papers Journal 8Unranked 13
YearRankTypeTitle / Venue / Authors
2024 J jnl
Circuits and mechanisms for TMS-induced corticospinal waves: Connecting sensitivity analysis to the network graph.
PLoS Comput. Biol.
Gene J. Yu, Federico Ranieri, Vincenzo Di Lazzaro, Marc A. Sommer, Angel V. Peterchev, Warren M. Grill
2021 J jnl
Bridging Hierarchies in Multi-Scale Models of Neural Systems: Look-Up Tables Enable Computationally Efficient Simulations of Non-linear Synaptic Dynamics.
Frontiers Comput. Neurosci.
Duy-Tan J. Pham, Gene J. Yu, Jean-Marie C. Bouteiller, Theodore W. Berger
2020 J jnl
A Computational Model of the Cholinergic Modulation of CA1 Pyramidal Cell Activity.
Frontiers Comput. Neurosci.
Adam Mergenthal, Jean-Marie C. Bouteiller, Gene J. Yu, Theodore W. Berger
2020 J jnl
Generation of Granule Cell Dendritic Morphologies by Estimating the Spatial Heterogeneity of Dendritic Branching.
Frontiers Comput. Neurosci.
Zane Z. Chou, Gene J. Yu, Theodore W. Berger
2020 J jnl
Topographic Organization of Correlation Along the Longitudinal and Transverse Axes in Rat Hippocampal CA3 Due to Excitatory Afferents.
Frontiers Comput. Neurosci.
Gene J. Yu, Jean-Marie C. Bouteiller, Theodore W. Berger
2019 J jnl
Axonal Anatomy Optimizes Spatial Encoding in the Rat Entorhinal-Dentate System: A Computational Study.
IEEE Trans. Biomed. Eng.
Gene J. Yu, Jean-Marie C. Bouteiller, Dong Song, Theodore W. Berger
2019 — conf
Network Activity Due to Topographic Organization of Schaffer Collaterals in a Large-Scale Model of Rat CA1.
EMBC
Gene J. Yu, Zhicheng Feng, Theodore W. Berger
2018 J jnl
Model-Based Analysis of Electrode Placement and Pulse Amplitude for Hippocampal Stimulation.
IEEE Trans. Biomed. Eng.
Clayton S. Bingham, Kyle Loizos, Gene J. Yu, Andrew Gilbert, Jean-Marie C. Bouteiller, Dong Song, Gianluca Lazzi, Theodore W. Berger
2018 — conf
Modeling Nonlinear Synaptic Dynamics: A Laguerre-Volterra Network Framework for Improved Computational Efficiency in Large Scale Simulations.
EMBC
Eric Y. Hu, Gene J. Yu, Dong Song, Jean-Marie C. Bouteiller, Theodore W. Berger
2018 — conf
Point Process Filtering Estimates of Branching Rate for Neural Dendritic Morphology Generation.
EMBC
Zane Z. Chou, Gene J. Yu, Theodore W. Berger
2016 J jnl
A Million-Plus Neuron Model of the Hippocampal Dentate Gyrus: Critical Role for Topography in Determining Spatiotemporal Network Dynamics.
IEEE Trans. Biomed. Eng.
Phillip J. Hendrickson, Gene J. Yu, Dong Song, Theodore W. Berger
2016 — conf
A large-scale detailed neuronal model of electrical stimulation of the dentate gyrus and perforant path as a platform for electrode design and optimization.
EMBC
Clayton S. Bingham, Kyle Loizos, Gene J. Yu, Andrew Gilbert, Jean-Marie Bouteiller, Dong Song, Gianluca Lazzi, Theodore W. Berger
2016 — conf
Place field detection using grid-based clustering in a large-scale computational model of the rat dentate gyrus.
EMBC
Gene J. Yu, Dong Song, Theodore W. Berger
2015 — conf
A million-plus neuron model of the hippocampal dentate gyrus: Dependency of spatio-temporal network dynamics on topography.
EMBC
Phillip J. Hendrickson, Gene J. Yu, Dong Song, Theodore W. Berger
2015 — conf
Topography-dependent spatio-temporal correlations in the entorhinal-dentate-CA3 circuit in a large-scale computational model of the Rat Hippocampus.
EMBC
Gene J. Yu, Phillip J. Hendrickson, Dong Song, Theodore W. Berger
2014 — conf
Implementation of the excitatory entorhinal-dentate-CA3 topography in a large-scale computational model of the rat hippocampus.
EMBC
Gene J. Yu, Dong Song, Theodore W. Berger
2013 — conf
The contribution of relative activation levels between populations of cells to network activity in a large-scale biologically realistic model of the hippocampus.
EMBC
Phillip J. Hendrickson, Gene J. Yu, Brian S. Robinson, Dong Song, Theodore W. Berger
2013 — conf
The role of topography in the transformation of spatiotemporal patterns by a large-scale, biologically realistic model of the rat dentate gyrus.
EMBC
Gene J. Yu, Phillip J. Hendrickson, Brian S. Robinson, Dong Song, Theodore W. Berger
2012 — conf
Implementation of activity-dependent synaptic plasticity rules for a large-scale biologically realistic model of the hippocampus.
EMBC
Brian S. Robinson, Gene J. Yu, Phillip J. Hendrickson, Dong Song, Theodore W. Berger
2012 — conf
Implementation of topographically constrained connectivity for a large-scale biologically realistic model of the hippocampus.
EMBC
Gene J. Yu, Brian S. Robinson, Phillip J. Hendrickson, Dong Song, Theodore W. Berger
2012 — conf
Towards a large-scale biologically realistic model of the hippocampus.
EMBC
Phillip J. Hendrickson, Gene J. Yu, Brian S. Robinson, Dong Song, Theodore W. Berger