Gasper Tkacik

24 papers B 1Journal 20Unranked 2
YearRankTypeTitle / Venue / Authors
2025 J jnl
ML-PWS: Estimating the Mutual Information Between Experimental Time Series Using Neural Networks.
CoRR
Manuel Reinhardt, Gasper Tkacik, Pieter Rein ten Wolde
2025 J jnl
Meta-Learning Theory-Informed Inductive Biases using Deep Kernel Gaussian Processes.
CoRR
Bahti Zakirov, Gasper Tkacik
2023 J jnl
Statistical modeling of adaptive neural networks explains co-existence of avalanches and oscillations in resting human brain.
Nat. Comput. Sci.
Fabrizio Lombardi, Selver Pepic, Oren Shriki, Gasper Tkacik, Daniele De Martino
2022 J jnl
Path Weight Sampling: Exact Monte Carlo Computation of the Mutual Information between Stochastic Trajectories.
CoRR
Manuel Reinhardt, Gasper Tkacik, Pieter Rein ten Wolde
2021 J jnl
Minimal biophysical model of combined antibiotic action.
PLoS Comput. Biol.
Bor Kavcic, Gasper Tkacik, Tobias Bollenbach
2020 J jnl
Clustering of Neural Activity: A Design Principle for Population Codes.
Frontiers Comput. Neurosci.
Michael J. Berry II, Gasper Tkacik
2019 B conf
A Tight Upper Bound on Mutual Information.
ITW
Michal Hledík, Thomas R. Sokolowski, Gasper Tkacik
2019 J jnl
Estimating information in time-varying signals.
PLoS Comput. Biol.
Sarah Anhala Cepeda-Humerez, Jakob Ruess, Gasper Tkacik
2019 J jnl
Molecular noise of innate immunity shapes bacteria-phage ecologies.
PLoS Comput. Biol.
Jakob Ruess, Maros Pleska, Calin C. Guet, Gasper Tkacik
2018 J jnl
A Tight Upper Bound on Mutual Information.
CoRR
Michal Hledík, Thomas R. Sokolowski, Gasper Tkacik
2018 J jnl
Nonlinear decoding of a complex movie from the mammalian retina.
PLoS Comput. Biol.
Vicente Botella-Soler, Stéphane Deny, Georg Martius, Olivier Marre, Gasper Tkacik
2017 J jnl
Probabilistic models for neural populations that naturally capture global coupling and criticality.
PLoS Comput. Biol.
Jan Humplik, Gasper Tkacik
2016 J jnl
Error-Robust Modes of the Retinal Population Code.
PLoS Comput. Biol.
Jason S. Prentice, Olivier Marre, Mark L. Ioffe, Adrianna Loback, Gasper Tkacik, Michael J. Berry II
2016 — conf
Estimating Nonlinear Neural Response Functions using GP Priors and Kronecker Methods.
NIPS
Cristina Savin, Gasper Tkacik
2016 — conf
Relevant sparse codes with variational information bottleneck.
NIPS
Matthew Chalk, Olivier Marre, Gasper Tkacik
2015 J jnl
High Accuracy Decoding of Dynamical Motion from a Large Retinal Population.
PLoS Comput. Biol.
Olivier Marre, Vicente Botella-Soler, Kristina D. Simmons, Thierry Mora, Gasper Tkacik, Michael J. Berry II
2014 J jnl
Searching for Collective Behavior in a Large Network of Sensory Neurons.
PLoS Comput. Biol.
Gasper Tkacik, Olivier Marre, Dario Amodei, Elad Schneidman, William Bialek, Michael J. Berry II
2013 J jnl
Learning Quadratic Receptive Fields from Neural Responses to Natural Stimuli.
Neural Comput.
Kanaka Rajan, Olivier Marre, Gasper Tkacik
2013 J jnl
Stimulus-dependent Maximum Entropy Models of Neural Population Codes.
PLoS Comput. Biol.
Einat Granot-Atedgi, Gasper Tkacik, Ronen Segev, Elad Schneidman
2013 J jnl
Transformation of Stimulus Correlations by the Retina.
PLoS Comput. Biol.
Kristina D. Simmons, Jason S. Prentice, Gasper Tkacik, Jan Homann, Heather K. Yee, Stephanie E. Palmer, Philip C. Nelson, Vijay Balasubramanian
2011 J jnl
Natural images from the birthplace of the human eye
CoRR
Gasper Tkacik, Patrick Garrigan, Charles P. Ratliff, Grega Milcinski, Jennifer M. Klein, Lucia H. Seyfarth, Peter Sterling, David H. Brainard, Vijay Balasubramanian
2009 — ch.
Cell Biology: Networks, Regulation and Pathways.
Encyclopedia of Complexity and Systems Science
Gasper Tkacik, William Bialek
2008 J jnl
Decoding spike timing: The differential reverse-correlation method.
Biosyst.
Gasper Tkacik, Marcelo O. Magnasco
2005 J jnl
Estimating mutual information and multi-information in large networks
CoRR
Noam Slonim, Gurinder S. Atwal, Gasper Tkacik, William Bialek