Gabriel Renaud

11 papers Journal 11
YearRankTypeTitle / Venue / Authors
2025 J jnl
<tt>AdDeam</tt> : a fast and scalable tool for estimating and clustering reference-level damage profiles.
Bioinform.
Louis Kraft, Thorfinn Sand Korneliussen, Peter Wad Sackett, Gabriel Renaud
2023 J jnl
Benchmarking software tools for trimming adapters and merging next-generation sequencing data for ancient DNA.
Frontiers Bioinform.
Annette Lien, Leonardo Pestana Legori, Louis Kraft, Peter Wad Sackett, Gabriel Renaud
2023 J jnl
HaploCart: Human mtDNA haplogroup classification using a pangenomic reference graph.
PLoS Comput. Biol.
Joshua Daniel Rubin, Nicola Alexandra Vogel, Shyam Gopalakrishnan, Peter Wad Sackett, Gabriel Renaud
2020 J jnl
A likelihood method for estimating present-day human contamination in ancient male samples using low-depth X-chromosome data.
Bioinform.
José Víctor Moreno-Mayar, Thorfinn Sand Korneliussen, Jyoti Dalal, Gabriel Renaud, Anders Albrechtsen, Rasmus Nielsen, Anna-Sapfo Malaspinas
2018 J jnl
glactools: a command-line toolset for the management of genotype likelihoods and allele counts.
Bioinform.
Gabriel Renaud
2017 J jnl
gargammel: a sequence simulator for ancient DNA.
Bioinform.
Gabriel Renaud, Kristian Hanghøj, Eske Willerslev, Ludovic Orlando
2015 J jnl
deML: robust demultiplexing of Illumina sequences using a likelihood-based approach.
Bioinform.
Gabriel Renaud, Udo Stenzel, Tomislav Maricic, Victor Wiebe, Janet Kelso
2014 J jnl
trieFinder: an efficient program for annotating digital gene expression (DGE) tags.
BMC Bioinform.
Gabriel Renaud, Matthew C. LaFave, Jin Liang, Tyra G. Wolfsberg, Shawn M. Burgess
2013 J jnl
freeIbis: an efficient basecaller with calibrated quality scores for Illumina sequencers.
Bioinform.
Gabriel Renaud, Martin Kircher, Udo Stenzel, Janet Kelso
2012 J jnl
Identical sequence patterns in the ends of exons and introns of human protein-coding genes.
Comput. Biol. Chem.
Raphael Tavares, Gabriel Renaud, Paulo Sergio Lopes Oliveira, Carlos G. Ferreira, Emmanuel Dias-Neto, Fabio Passetti
2009 J jnl
Development and evaluation of new mask protocols for gene expression profiling in humans and chimpanzees.
BMC Bioinform.
Donna M. Toleno, Gabriel Renaud, Tyra G. Wolfsberg, Munirul Islam, Derek E. Wildman, Kimberly D. Siegmund, Joseph G. Hacia