Gabriel Moreno-Hagelsieb

13 papers A 1Misc 1Journal 8Unranked 3
YearRankTypeTitle / Venue / Authors
2024 J jnl
AnnoView enables large-scale analysis, comparison, and visualization of microbial gene neighborhoods.
Briefings Bioinform.
Xin Wei, Huagang Tan, Briallen Lobb, William Zhen, Zijing Wu, Donovan H. Parks, Josh D. Neufeld, Gabriel Moreno-Hagelsieb, Andrew C. Doxey
2024 — conf
Gene function prediction using an AnnoTree-based genomic language model.
BIBM
Huagang Tan, Gabriel Moreno-Hagelsieb, Andrew C. Doxey
2024 — conf
Transcription Factors Across the Escherichia coli Pangenome: A 3D Perspective.
RECOMB-CG
Gabriel Moreno-Hagelsieb
2021 J jnl
The Transporter Classification Database (TCDB): 2021 update.
Nucleic Acids Res.
Milton H. Saier Jr., Vamsee S. Reddy, Gabriel Moreno-Hagelsieb, Kevin J. Hendargo, Yichi Zhang, Vasu Iddamsetty, Katie Jing Kay Lam, Nuo Tian, Steven Russum, Jianing Wang, Arturo Medrano-Soto
2016 J jnl
The Transporter Classification Database (TCDB): recent advances.
Nucleic Acids Res.
Milton H. Saier Jr., Vamsee S. Reddy, Brian V. Tsu, Muhammad Saad Ahmed, Chun Li, Gabriel Moreno-Hagelsieb
2015 J jnl
The functional landscape bound to the transcription factors of Escherichia coli K-12.
Comput. Biol. Chem.
Ernesto Pérez-Rueda, Silvia Tenorio-Salgado, Alejandro Huerta-Saquero, Yalbi I. Balderas-Martínez, Gabriel Moreno-Hagelsieb
2013 J jnl
Phylogenomic clustering for selecting non-redundant genomes for comparative genomics.
Bioinform.
Gabriel Moreno-Hagelsieb, Zilin Wang, Stephanie Walsh, Aisha ElSherbiny
2008 J jnl
Choosing BLAST options for better detection of orthologs as reciprocal best hits.
Bioinform.
Gabriel Moreno-Hagelsieb, Kristen Latimer
2008 J jnl
GeConT 2: gene context analysis for orthologous proteins, conserved domains and metabolic pathways.
Nucleic Acids Res.
Cristian E. Martinez-Guerrero, Ricardo Ciria, Cei Abreu-Goodger, Gabriel Moreno-Hagelsieb, Enrique Merino
2005 Misc conf
Modelling Dynamics of Genetic Networks as a Multiscale Process.
International Conference on Computational Science (3)
Xilin Wei, Roderick V. N. Melnik, Gabriel Moreno-Hagelsieb
2002 A conf
A powerful non-homology method for the prediction of operons in prokaryotes.
ISMB
Gabriel Moreno-Hagelsieb, Julio Collado-Vides
2002 — conf
Genomics of Gene Regulation: The View from Escherichia coli.
Gene Regulations and Metabolism
Julio Collado-Vides, Gabriel Moreno-Hagelsieb, Ernesto Pérez-Rueda, Heladia Salgado, Araceli M. Huerta, Rosa María Gutiérrez, David A. Rosenblueth, Andrés Christen, Esperanza Benítez-Bellón, Arturo Medrano-Soto, Socorro Gama-Castro, Alberto Santos-Zavaleta, César Bonavides-Martínez, Edgar Díaz-Peredo, Fabiola Sánchez-Solano, Dulce María Millá
2002 J jnl
Operon conservation from the point of view of Escherichia coli, and inference of functional inter-dependence of gene products from genome context.
Silico Biol.
Gabriel Moreno-Hagelsieb, Julio Collado-Vides