Funda Meric-Bernstam

21 papers Misc 4Journal 12Unranked 5

Year	Rank	Type	Title / Venue / Authors
2020	Misc	`conf`	Learning Patient Representations from Electronic Health Records across Diverse Data Types. AMIA Timothy A. Miller, Dmitriy Dligach, Fei Wang, Yuqi Si, Funda Meric-Bernstam
2020	J	`jnl`	Rate of change in investigational treatment options: An analysis of reports from a large precision oncology decision support effort. Int. J. Medical Informatics Alejandro Araya, Jia Zeng, Amber M. Johnson, Md Abu Shufean, Jordi Rodon, Funda Meric-Bernstam, Elmer V. Bernstam
2020	J	`jnl`	Recommendations for patient similarity classes: results of the AMIA 2019 workshop on defining patient similarity. J. Am. Medical Informatics Assoc. Nathan D. Seligson, Jeremy L. Warner, William S. Dalton, David Martin, Robert S. Miller, Debra Patt, Kenneth L. Kehl, Matvey B. Palchuk, Gil Alterovitz, Laura K. Wiley, Ming Huang, Feichen Shen, Yanshan Wang, Khoa A. Nguyen, Anthony F. Wong, Funda Meric-Bernstam, Elmer V. Bernstam, James L. Chen
2019	Misc	`conf`	Decision Support for Genomically-Informed Cancer Therapy. AMIA Funda Meric-Bernstam, Matthew J. Rioth, Assaf Halevy, Pete Stetson
2019	—	`conf`	Overview of the TREC 2019 Precision Medicine Track. TREC Kirk Roberts, Dina Demner-Fushman, Ellen M. Voorhees, William R. Hersh, Steven Bedrick, Alexander J. Lazar, Shubham Pant, Funda Meric-Bernstam
2019	J	`jnl`	Rapamycin-mTOR+BRAF=? Using relational similarity to find therapeutically relevant drug-gene relationships in unstructured text. J. Biomed. Informatics Safa Fathiamini, Amber M. Johnson, Jia Zeng, Vijaykumar Holla, Nora S. Sanchez, Funda Meric-Bernstam, Elmer V. Bernstam, Trevor Cohen
2016	J	`jnl`	Automated identification of molecular effects of drugs (AIMED). J. Am. Medical Informatics Assoc. Safa Fathiamini, Amber M. Johnson, Jia Zeng, Alejandro Araya, Vijaykumar Holla, Ann M. Bailey, Beate Litzenburger, Nora S. Sanchez, Yekaterina Khotskaya, Hua Xu, Funda Meric-Bernstam, Elmer V. Bernstam, Trevor Cohen
2016	J	`jnl`	Extracting genetic alteration information for personalized cancer therapy from ClinicalTrials.gov. J. Am. Medical Informatics Assoc. Jun Xu, Hee-Jin Lee, Jia Zeng, Yonghui Wu, Yaoyun Zhang, Liang-Chin Huang, Amber M. Johnson, Vijaykumar Holla, Ann M. Bailey, Trevor Cohen, Funda Meric-Bernstam, Elmer V. Bernstam, Hua Xu
2016	J	`jnl`	Patient knowledge and information-seeking about personalized cancer therapy. Int. J. Medical Informatics Deevakar Rogith, Rafeek A. Yusuf, Shelley R. Hovick, Bryan M. Fellman, Susan K. Peterson, Allison M. Burton-Chase, Yisheng Li, Elmer V. Bernstam, Funda Meric-Bernstam
2015	J	`jnl`	Using Ontology Fingerprints to disambiguate gene name entities in the biomedical literature. Database J. Biol. Databases Curation Guocai Chen, Jieyi Zhao, Trevor Cohen, Cui Tao, Jingchun Sun, Hua Xu, Elmer V. Bernstam, Andrew Lawson, Jia Zeng, Amber M. Johnson, Vijaykumar Holla, Ann M. Bailey, Humberto Lara-Guerra, Beate Litzenburger, Funda Meric-Bernstam, W. Jim Zheng
2014	J	`jnl`	Bias from removing read duplication in ultra-deep sequencing experiments. Bioinform. Wanding Zhou, Tenghui Chen, Hao Zhao, Agda Karina Eterovic, Funda Meric-Bernstam, Gordon B. Mills, Ken Chen
2014	Misc	`conf`	Exploring the Use of SemRep Predications to Help Identify Secondary Drug Targets for Personalized Cancer Therapy. AMIA Safa Fathiamini, Amber M. Johnson, Vijaykumar Holla, Ann M. Bailey, Jia Zeng, Lauren Brusco, Funda Meric-Bernstam, Elmer V. Bernstam, Trevor Cohen
2014	—	`conf`	Using Ontology Fingerprints to Disambiguate Gene Name Entities in the Biomedical Literature. ICBO Guocai Chen, Jieyi Zhao, Trevor Cohen, Cui Tao, Jingchun Sun, Hua Xu, Elmer V. Bernstam, Jia Zeng, Amber M. Johnson, Vijaykumar Holla, Ann Balley, Funda Meric-Bernstam, W. Jim Zheng
2013	Misc	`conf`	Informatics Infrastructure for Routine Personalized Medicine. AMIA Elmer V. Bernstam, Ken Chen, Hua Xu, Funda Meric-Bernstam
2012	J	`jnl`	PurityEst: estimating purity of human tumor samples using next-generation sequencing data. Bioinform. Xiaoping Su, Li Zhang, Jianping Zhang, Funda Meric-Bernstam, John N. Weinstein
2007	—	`conf`	Currency of Online Breast Cancer Information. MedInfo Funda Meric-Bernstam, Muhammad F. Walji, Smitha Sagaram, Deepak Sagaram, Elmer V. Bernstam
2005	J	`jnl`	Instruments to assess the quality of health information on the World Wide Web: what can our patients actually use? Int. J. Medical Informatics Elmer V. Bernstam, Dawn M. Shelton, Muhammad F. Walji, Funda Meric-Bernstam
2005	J	`jnl`	Searching for cancer-related information online: Unintended retrieval of complementary and alternative medicine information. Int. J. Medical Informatics Muhammad F. Walji, Smitha Sagaram, Funda Meric-Bernstam, Craig W. Johnson, Elmer V. Bernstam
2005	J	`jnl`	Usability of quality measures for online health information: Can commonly used technical quality criteria be reliably assessed? Int. J. Medical Informatics Elmer V. Bernstam, Smitha Sagaram, Muhammad F. Walji, Craig W. Johnson, Funda Meric-Bernstam
2004	—	`conf`	Cancer-related Complementary and Alternative Medicine Online: Factors Affecting Information Retrieval. MedInfo Muhammad F. Walji, Smitha Sagaram, Funda Meric-Bernstam, Craig W. Johnson, Elmer V. Bernstam
2004	—	`conf`	Inter-Observer Agreement for Quality Measures Applied to Online Health Information. MedInfo Smitha Sagaram, Muhammad F. Walji, Funda Meric-Bernstam, Craig W. Johnson, Elmer V. Bernstam