Fredrik Ronquist

13 papers A 3Journal 8Unranked 2
YearRankTypeTitle / Venue / Authors
2025 J jnl
HAPP: High-accuracy pipeline for processing deep metabarcoding data.
PLoS Comput. Biol.
John Sundh, Emma Granqvist, Ela Iwaszkiewicz-Eggebrecht, Lokeshwaran Manoharan, Laura van Dijk, Robert Goodsell, Nerivania N. Godeiro, Bruno C. Bellini, Johanna Orsholm, Piotr Lukasik, Andreia Miraldo, Tomas Roslin, Ayco J. M. Tack, Anders F. Andersson, Fredrik Ronquist
2023 J jnl
ASV portal: an interface to DNA-based biodiversity data in the Living Atlas.
BMC Bioinform.
Maria Prager, Daniel Lundin, Fredrik Ronquist, Anders F. Andersson
2023 A conf
Automatic Alignment in Higher-Order Probabilistic Programming Languages.
ESOP
Daniel Lundén, Gizem Çaylak, Fredrik Ronquist, David Broman
2023 J jnl
Automatic Alignment in Higher-Order Probabilistic Programming Languages.
CoRR
Daniel Lundén, Gizem Çaylak, Fredrik Ronquist, David Broman
2022 A conf
Compiling Universal Probabilistic Programming Languages with Efficient Parallel Sequential Monte Carlo Inference.
ESOP
Daniel Lundén, Joey Öhman, Jan Kudlicka, Viktor Senderov, Fredrik Ronquist, David Broman
2021 J jnl
Universal Probabilistic Programming Language Compilation with Parallel Efficient Sequential Monte Carlo Inference.
CoRR
Daniel Lundén, Joey Öhman, Jan Kudlicka, Viktor Senderov, Fredrik Ronquist, David Broman
2019 A conf
Probabilistic Programming for Birth-Death Models of Evolution Using an Alive Particle Filter with Delayed Sampling.
UAI
Jan Kudlicka, Lawrence M. Murray, Fredrik Ronquist, Thomas B. Schön
2018 J jnl
Automatic Alignment of Sequential Monte Carlo Inference in Higher-Order Probabilistic Programs.
CoRR
Daniel Lundén, David Broman, Fredrik Ronquist, Lawrence M. Murray
2006 — conf
A Biodiversity Semantic Associative Annotation Tool.
International Conference on Internet Computing
David Gaitros, Wei Zhang, Austin Mast, Gregory A. Riccardi, Fredrik Ronquist
2005 — conf
MorphBank, The Development of a General Purpose Bioinformatics Database.
International Conference on Internet Computing
Fredrik Ronquist, Gregory A. Riccardi, David Gaitros, Neelima Jammigumpula, Wifredo Blanco
2004 J jnl
Parallel Metropolis coupled Markov chain Monte Carlo for Bayesian phylogenetic inference.
Bioinform.
Gautam Altekar, Sandhya Dwarkadas, John P. Huelsenbeck, Fredrik Ronquist
2003 J jnl
MrBayes 3: Bayesian phylogenetic inference under mixed models.
Bioinform.
Fredrik Ronquist, John P. Huelsenbeck
2001 J jnl
MRBAYES: Bayesian inference of phylogenetic trees.
Bioinform.
John P. Huelsenbeck, Fredrik Ronquist