Frauke Wilm

46 papers Journal 25Unranked 21
YearRankTypeTitle / Venue / Authors
2026 — conf
Abstract: Investigation of Class Separability within Object Detection Models in Histopathology.
Bildverarbeitung für die Medizin
Jonas Ammeling, Jonathan Ganz, Frauke Wilm, Katharina Breininger, Marc Aubreville
2026 J jnl
Analyzing and adapting diffusion segmentation behavior for medical images.
Biomed. Signal Process. Control.
Mathias Öttl, Siyuan Mei, Frauke Wilm, Jingna Qiu, Jana Steenpass, Matthias Rübner, Arndt Hartmann, Hanna Hübner, Peter A. Fasching, Andreas K. Maier, Ramona Erber, Katharina Breininger
2025 J jnl
A COCO-Formatted Instance-Level Dataset for Plasmodium Falciparum Detection in Giemsa-Stained Blood Smears.
CoRR
Frauke Wilm, Luis Carlos Rivera Monroy, Mathias Öttl, Lukas Mürdter, Leonid Mill, Andreas K. Maier
2025 — conf
Abstract: Leveraging Image Captions for Selective Whole Slide Image Annotation.
Bildverarbeitung für die Medizin
Jingna Qiu, Marc Aubreville, Frauke Wilm, Mathias Öttl, Jonas Utz, Maja Schlereth, Katharina Breininger
2025 — conf
Abstract: Multi-level Cancer Profiling through Joint Cell-graph Representations.
Bildverarbeitung für die Medizin
Luis Carlos Rivera Monroy, Leonhard Rist, Frauke Wilm, Christian Ostalecki, Andreas Baur, Julio Vera, Katharina Breininger, Andreas K. Maier
2025 J jnl
Dataset creation for supervised deep learning-based analysis of microscopic images - review of important considerations and recommendations.
CoRR
Christof A. Bertram, Viktoria Weiss, Jonas Ammeling, F. Maria Schabel, Taryn A. Donovan, Frauke Wilm, Christian Marzahl, Katharina Breininger, Marc Aubreville
2025 J jnl
Decomposition Sampling for Efficient Region Annotations in Active Learning.
CoRR
Jingna Qiu, Frauke Wilm, Mathias Öttl, Jonas Utz, Maja Schlereth, Moritz Schillinger, Marc Aubreville, Katharina Breininger
2025 J jnl
Investigation of Class Separability Within Object Detection Models in Histopathology.
IEEE Trans. Medical Imaging
Jonas Ammeling, Jonathan Ganz, Frauke Wilm, Katharina Breininger, Marc Aubreville
2024 — conf
Abstract: Adaptive Region Selection for Active Learning in Whole Slide Image Semantic Segmentation.
Bildverarbeitung für die Medizin
Jingna Qiu, Frauke Wilm, Mathias Öttl, Maja Schlereth, Chang Liu, Tobias Heimann, Marc Aubreville, Katharina Breininger
2024 — conf
Abstract: Comprehensive Multi-domain Dataset for Mitotic Figure Detection.
Bildverarbeitung für die Medizin
Marc Aubreville, Frauke Wilm, Nikolas Stathonikos, Katharina Breininger, Taryn A. Donovan, Samir Jabari, Robert Klopfleisch, Mitko Veta, Jonathan Ganz, Jonas Ammeling, Paul J. van Diest, Christof A. Bertram
2024 J jnl
Analysing Diffusion Segmentation for Medical Images.
CoRR
Mathias Öttl, Siyuan Mei, Frauke Wilm, Jana Steenpass, Matthias Rübner, Arndt Hartmann, Matthias W. Beckmann, Peter A. Fasching, Andreas K. Maier, Ramona Erber, Katharina Breininger
2024 — conf
Appearance-based Debiasing of Deep Learning Models in Medical Imaging.
Bildverarbeitung für die Medizin
Frauke Wilm, Marcel Reimann, Oliver Taubmann, Alexander Mühlberg, Katharina Breininger
2024 J jnl
Domain and Content Adaptive Convolutions for Cross-Domain Adenocarcinoma Segmentation.
CoRR
Frauke Wilm, Mathias Öttl, Marc Aubreville, Katharina Breininger
2024 J jnl
Domain generalization across tumor types, laboratories, and species - Insights from the 2022 edition of the Mitosis Domain Generalization Challenge.
Medical Image Anal.
Marc Aubreville, Nikolas Stathonikos, Taryn A. Donovan, Robert Klopfleisch, Jonas Ammeling, Jonathan Ganz, Frauke Wilm, Mitko Veta, Samir Jabari, Markus Eckstein, Jonas Annuscheit, Christian Krumnow, Engin Bozaba, Sercan Çayir, Hongyan Gu, Xiang Anthony Chen, Mostafa Jahanifar, Adam Shephard, Satoshi Kondo, Satoshi Kasai, Sujatha Kotte, VG Saipradeep, Maxime W. Lafarge, Viktor H. Koelzer, Ziyue Wang, Yongbing Zhang, Sen Yang, Xiyue Wang, Katharina Breininger, Christof A. Bertram
2024 — conf
Leveraging Image Captions for Selective Whole Slide Image Annotation.
MICCAI (12)
Jingna Qiu, Marc Aubreville, Frauke Wilm, Mathias Öttl, Jonas Utz, Maja Schlereth, Katharina Breininger
2024 J jnl
Leveraging image captions for selective whole slide image annotation.
CoRR
Jingna Qiu, Marc Aubreville, Frauke Wilm, Mathias Öttl, Jonas Utz, Maja Schlereth, Katharina Breininger
2024 J jnl
Rethinking U-net Skip Connections for Biomedical Image Segmentation.
CoRR
Frauke Wilm, Jonas Ammeling, Mathias Öttl, Rutger H. J. Fick, Marc Aubreville, Katharina Breininger
2024 J jnl
Style-Extracting Diffusion Models for Semi-Supervised Histopathology Segmentation.
CoRR
Mathias Öttl, Frauke Wilm, Jana Steenpass, Jingna Qiu, Matthias Rübner, Arndt Hartmann, Matthias W. Beckmann, Peter A. Fasching, Andreas K. Maier, Ramona Erber, Bernhard Kainz, Katharina Breininger
2024 — conf
Style-Extracting Diffusion Models for Semi-supervised Histopathology Segmentation.
ECCV (75)
Mathias Öttl, Frauke Wilm, Jana Steenpass, Jingna Qiu, Matthias Rübner, Arndt Hartmann, Matthias W. Beckmann, Peter A. Fasching, Andreas Maier, Ramona Erber, Bernhard Kainz, Katharina Breininger
2023 — conf
Abstract: Pan-tumor CAnine CuTaneous Cancer Histology (CATCH) Dataset.
Bildverarbeitung für die Medizin
Frauke Wilm, Marco Fragoso, Christian Marzahl, Jingna Qiu, Chloé Puget, Laura Diehl, Christof A. Bertram, Robert Klopfleisch, Andreas K. Maier, Katharina Breininger, Marc Aubreville
2023 — conf
Abstract: the MIDOG Challenge 2021 - Mitosis Domain Generalization in Histopathology Images.
Bildverarbeitung für die Medizin
Marc Aubreville, Nikolas Stathonikos, Christof A. Bertram, Robert Klopfleisch, Natalie D. ter Hoeve, Francesco Ciompi, Frauke Wilm, Christian Marzahl, Taryn A. Donovan, Andreas K. Maier, Mitko Veta, Katharina Breininger
2023 — conf
Adaptive Region Selection for Active Learning in Whole Slide Image Semantic Segmentation.
MICCAI (2)
Jingna Qiu, Frauke Wilm, Mathias Öttl, Maja Schlereth, Chang Liu, Tobias Heimann, Marc Aubreville, Katharina Breininger
2023 J jnl
Adaptive Region Selection for Active Learning in Whole Slide Image Semantic Segmentation.
CoRR
Jingna Qiu, Frauke Wilm, Mathias Öttl, Maja Schlereth, Chang Liu, Tobias Heimann, Marc Aubreville, Katharina Breininger
2023 J jnl
Domain generalization across tumor types, laboratories, and species - insights from the 2022 edition of the Mitosis Domain Generalization Challenge.
CoRR
Marc Aubreville, Nikolas Stathonikos, Taryn A. Donovan, Robert Klopfleisch, Jonathan Ganz, Jonas Ammeling, Frauke Wilm, Mitko Veta, Samir Jabari, Markus Eckstein, Jonas Annuscheit, Christian Krumnow, Engin Bozaba, Sercan Cayir, Hongyan Gu, Xiang 'Anthony' Chen, Mostafa Jahanifar, Adam Shephard, Satoshi Kondo, Satoshi Kasai, Sujatha Kotte, VG Saipradeep, Maxime W. Lafarge, Viktor H. Koelzer, Ziyue Wang, Yongbing Zhang, Sen Yang, Xiyue Wang, Katharina Breininger, Christof A. Bertram
2023 — conf
Improved HER2 Tumor Segmentation with Subtype Balancing Using Deep Generative Networks.
ISBI
Mathias Öttl, Jana Steenpass, Matthias Rübner, Carol I. Geppert, Jingna Qiu, Frauke Wilm, Arndt Hartmann, Matthias W. Beckmann, Peter A. Fasching, Andreas Maier, Ramona Erber, Katharina Breininger
2023 — conf
Mind the Gap: Scanner-Induced Domain Shifts Pose Challenges for Representation Learning in Histopathology.
ISBI
Frauke Wilm, Marco Fragoso, Christof A. Bertram, Nikolas Stathonikos, Mathias Öttl, Jingna Qiu, Robert Klopfleisch, Andreas Maier, Marc Aubreville, Katharina Breininger
2023 J jnl
Mitosis domain generalization in histopathology images - The MIDOG challenge.
Medical Image Anal.
Marc Aubreville, Nikolas Stathonikos, Christof A. Bertram, Robert Klopfleisch, Natalie D. ter Hoeve, Francesco Ciompi, Frauke Wilm, Christian Marzahl, Taryn A. Donovan, Andreas K. Maier, Jack Breen, Nishant Ravikumar, Youjin Chung, Jinah Park, Ramin Nateghi, Fattaneh Pourakpour, Rutger H. J. Fick, Saima Ben Hadj, Mostafa Jahanifar, Adam Shephard, Jakob Dexl, Thomas Wittenberg, Satoshi Kondo, Maxime W. Lafarge, Viktor H. Koelzer, Jingtang Liang, Yubo Wang, Xi Long, Jingxin Liu, Salar Razavi, April Khademi, Sen Yang, Xiyue Wang, Ramona Erber, Andrea Klang, Karoline Lipnik, Pompei Bolfa, Michael J. Dark, Gabriel Wasinger, Mitko Veta, Katharina Breininger
2023 J jnl
Multi-Scanner Canine Cutaneous Squamous Cell Carcinoma Histopathology Dataset.
CoRR
Frauke Wilm, Marco Fragoso, Christof A. Bertram, Nikolas Stathonikos, Mathias Öttl, Jingna Qiu, Robert Klopfleisch, Andreas K. Maier, Katharina Breininger, Marc Aubreville
2023 — conf
Multi-scanner Canine Cutaneous Squamous Cell Carcinoma Histopathology Dataset.
Bildverarbeitung für die Medizin
Frauke Wilm, Marco Fragoso, Christof A. Bertram, Nikolas Stathonikos, Mathias Öttl, Jingna Qiu, Robert Klopfleisch, Andreas K. Maier, Katharina Breininger, Marc Aubreville
2022 J jnl
Improved HER2 Tumor Segmentation with Subtype Balancing using Deep Generative Networks.
CoRR
Mathias Öttl, Jana Mönius, Matthias Rübner, Carol I. Geppert, Jingna Qiu, Frauke Wilm, Arndt Hartmann, Matthias W. Beckmann, Peter A. Fasching, Andreas K. Maier, Ramona Erber, Katharina Breininger
2022 J jnl
Mind the Gap: Scanner-induced domain shifts pose challenges for representation learning in histopathology.
CoRR
Frauke Wilm, Marco Fragoso, Christof A. Bertram, Nikolas Stathonikos, Mathias Öttl, Jingna Qiu, Robert Klopfleisch, Andreas K. Maier, Marc Aubreville, Katharina Breininger
2022 J jnl
Mitosis domain generalization in histopathology images - The MIDOG challenge.
CoRR
Marc Aubreville, Nikolas Stathonikos, Christof A. Bertram, Robert Klopfleisch, Natalie D. ter Hoeve, Francesco Ciompi, Frauke Wilm, Christian Marzahl, Taryn A. Donovan, Andreas K. Maier, Jack Breen, Nishant Ravikumar, Youjin Chung, Jinah Park, Ramin Nateghi, Fattaneh Pourakpour, Rutger H. J. Fick, Saima Ben Hadj, Mostafa Jahanifar, Nasir M. Rajpoot, Jakob Dexl, Thomas Wittenberg, Satoshi Kondo, Maxime W. Lafarge, Viktor H. Koelzer, Jingtang Liang, Yubo Wang, Xi Long, Jingxin Liu, Salar Razavi, April Khademi, Sen Yang, Xiyue Wang, Mitko Veta, Katharina Breininger
2022 J jnl
Pan-Tumor CAnine cuTaneous Cancer Histology (CATCH) Dataset.
CoRR
Frauke Wilm, Marco Fragoso, Christian Marzahl, Jingna Qiu, Christof A. Bertram, Robert Klopfleisch, Andreas K. Maier, Katharina Breininger, Marc Aubreville
2022 — conf
Reference Algorithms for the Mitosis Domain Generalization (MIDOG) 2022 Challenge.
MIDOG/DRAC@MICCAI
Jonas Ammeling, Frauke Wilm, Jonathan Ganz, Katharina Breininger, Marc Aubreville
2021 — conf
Cell Detection for Asthma on Partially Annotated Whole Slide Images - Learning to be EXACT.
Bildverarbeitung für die Medizin
Christian Marzahl, Christof A. Bertram, Frauke Wilm, Jörn Voigt, Ann K. Barton, Robert Klopfleisch, Katharina Breininger, Andreas Maier, Marc Aubreville
2021 J jnl
Dataset on Bi- and Multi-Nucleated Tumor Cells in Canine Cutaneous Mast Cell Tumors.
CoRR
Christof A. Bertram, Taryn A. Donovan, Marco Tecilla, Florian Bartenschlager, Marco Fragoso, Frauke Wilm, Christian Marzahl, Katharina Breininger, Andreas Maier, Robert Klopfleisch, Marc Aubreville
2021 — conf
Dataset on Bi- and Multi-nucleated Tumor Cells in Canine Cutaneous Mast Cell Tumors.
Bildverarbeitung für die Medizin
Christof A. Bertram, Taryn A. Donovan, Marco Tecilla, Florian Bartenschlager, Marco Fragoso, Frauke Wilm, Christian Marzahl, Katharina Breininger, Andreas Maier, Robert Klopfleisch, Marc Aubreville
2021 J jnl
Domain Adversarial RetinaNet as a Reference Algorithm for the MItosis DOmain Generalization (MIDOG) Challenge.
CoRR
Frauke Wilm, Katharina Breininger, Marc Aubreville
2021 — conf
Domain Adversarial RetinaNet as a Reference Algorithm for the MItosis DOmain Generalization Challenge.
MIDOG/MOOD/Learn2Reg@MICCAI
Frauke Wilm, Christian Marzahl, Katharina Breininger, Marc Aubreville
2021 J jnl
Fast whole-slide cartography in colon cancer histology using superpixels and CNN classification.
CoRR
Frauke Wilm, Michaela Benz, Volker Bruns, Serop Baghdadlian, Jakob Dexl, David Hartmann, Petr Kuritcyn, Martin Weidenfeller, Thomas Wittenberg, Susanne Merkel, Arndt Hartmann, Markus Eckstein, Carol I. Geppert
2021 — conf
Influence of Inter-Annotator Variability on Automatic Mitotic Figure Assessment.
Bildverarbeitung für die Medizin
Frauke Wilm, Christof A. Bertram, Christian Marzahl, Alexander Bartel, Taryn A. Donovan, Charles-Antoine Assenmacher, Kathrin Becker, Mark Bennett, Sarah Corner, Brieuc Cossic, Daniela Denk, Martina Dettwiler, Beatriz Garcia Gonzalez, Corinne Gurtner, Annabelle Heier, Annika Lehmbecker, Sophie Merz, Stephanie Plog, Anja Schmidt, Franziska Sebastian, Rebecca C. Smedley, Marco Tecilla, Tuddow Thaiwong, Katharina Breininger, Matti Kiupel, Andreas Maier, Robert Klopfleisch, Marc Aubreville
2021 J jnl
Inter-Species Cell Detection: Datasets on pulmonary hemosiderophages in equine, human and feline specimens.
CoRR
Christian Marzahl, Jenny Hill, Jason Stayt, Dorothee Bienzle, Lutz Welker, Frauke Wilm, Jörn Voigt, Marc Aubreville, Andreas K. Maier, Robert Klopfleisch, Katharina Breininger, Christof A. Bertram
2021 — conf
Iterative Cross-Scanner Registration for Whole Slide Images.
ICCVW
Luisa Theelke, Frauke Wilm, Christian Marzahl, Christof A. Bertram, Robert Klopfleisch, Andreas Maier, Marc Aubreville, Katharina Breininger
2021 J jnl
Learning to be EXACT, Cell Detection for Asthma on Partially Annotated Whole Slide Images.
CoRR
Christian Marzahl, Christof A. Bertram, Frauke Wilm, Jörn Voigt, Ann K. Barton, Robert Klopfleisch, Katharina Breininger, Andreas Maier, Marc Aubreville
2021 — conf
Robust Quad-Tree based Registration on Whole Slide Images.
COMPAY@MICCAI
Christian Marzahl, Frauke Wilm, Franz F. Dressler, Lars Tharun, Sven Perner, Christof A. Bertram, Christine Kröger, Jörn Voigt, Robert Klopfleisch, Andreas K. Maier, Marc Aubreville, Katharina Breininger
2020 J jnl
How Many Annotators Do We Need? - A Study on the Influence of Inter-Observer Variability on the Reliability of Automatic Mitotic Figure Assessment.
CoRR
Frauke Wilm, Christof A. Bertram, Christian Marzahl, Alexander Bartel, Taryn A. Donovan, Charles-Antoine Assenmacher, Kathrin Becker, Mark Bennett, Sarah Corner, Brieuc Cossic, Daniela Denk, Martina Dettwiler, Beatriz Garcia Gonzalez, Corinne Gurtner, Annika Lehmbecker, Sophie Merz, Stephanie Plog, Anja Schmidt, Rebecca C. Smedley, Marco Tecilla, Tuddow Thaiwong, Katharina Breininger, Matti Kiupel, Andreas Maier, Robert Klopfleisch, Marc Aubreville