François Képès

18 papers C 1Journal 14Unranked 3
YearRankTypeTitle / Venue / Authors
2016 J jnl
Analysis tools for the interplay between genome layout and regulation.
BMC Bioinform.
Costas Bouyioukos, Mohamed Elati, François Képès
2016 J jnl
GREAT: a web portal for Genome Regulatory Architecture Tools.
Nucleic Acids Res.
Costas Bouyioukos, François Bucchini, Mohamed Elati, François Képès
2013 — conf
Parallel stepwise stochastic simulation: harnessing GPUs to explore possible futures states of a chromosome folding model thanks to the possible futures algorithm (PFA).
SIGSIM-PADS
Jonathan Passerat-Palmbach, Jonathan Caux, Yannick Le Pennec, Romain Reuillon, Ivan Junier, François Képès, David R. C. Hill
2011 C conf
Boosting Binding Sites Prediction Using Gene's Positions.
WABI
Mohamed Elati, Rim Fekih, Rémy Nicolle, Ivan Junier, Joan Hérisson, François Képès
2011 J jnl
Computing with bacterial constituents, cells and populations: from bioputing to bactoputing.
Theory Biosci.
Vic Norris, Abdallah Zemirline, Patrick Amar, Jean Nicolas Audinot, Pascal Ballet, Eshel Ben-Jacob, Gilles Bernot, Guillaume Beslon, Armelle Cabin, Eric Fanchon, Jean-Louis Giavitto, Nicolas Glade, Patrick Greussay, Yohann Grondin, James A. Foster, Guillaume Hutzler, Jürgen Jost, François Képès, Olivier Michel, Franck Molina, Jacqueline Signorini, Pasquale Stano, Alain R. Thierry
2011 J jnl
Introduction to special issue ECCS'09 in Theory in Biosciences.
Theory Biosci.
Markus Kirkilionis, François Képès
2010 J jnl
Challenges in experimental data integration within genome-scale metabolic models.
Algorithms Mol. Biol.
Pierre-Yves Bourguignon, Areejit Samal, François Képès, Jürgen Jost, Olivier C. Martin
2010 J jnl
Periodic pattern detection in sparse boolean sequences.
Algorithms Mol. Biol.
Ivan Junier, Joan Hérisson, François Képès
2010 J jnl
Spatial and Topological Organization of DNA Chains Induced by Gene Co-localization.
PLoS Comput. Biol.
Ivan Junier, Olivier C. Martin, François Képès
2009 — conf
Spatial Information and Boolean Genetic Regulatory Networks.
BICoB
Matthieu Manceny, Marc Aiguier, Pascale Le Gall, Joan Hérisson, Ivan Junier, François Képès
2008 J jnl
Topology-based abstraction of complex biological systems: application to the Golgi apparatus.
Theory Biosci.
Mathieu Poudret, Agnès Arnould, Jean-Paul Comet, Pascale Le Gall, Philippe Meseure, François Képès
2007 J jnl
Chronique : Le programme d'épigénomique.
Tech. Sci. Informatiques
Gilles Bernot, François Képès
2007 J jnl
From MIN model to ordinary differential equations.
J. Integr. Bioinform.
Anastasia Yartseva, Raymond Devillers, Hanna Klaudel, François Képès
2007 J jnl
Incremental and unifying modelling formalism for biological interaction networks.
BMC Bioinform.
Anastasia Yartseva, Hanna Klaudel, Raymond Devillers, François Képès
2006 J jnl
Property-Driven Statistics of Biological Networks.
Trans. Comp. Sys. Biology
Pierre-Yves Bourguignon, Vincent Danos, François Képès, Serge Smidtas, Vincent Schächter
2006 — conf
Yeast Naked DNA Spatial Organization Predisposes to Transcriptional Regulation.
ICCSA (1)
Oriane Matte-Tailliez, Joan Hérisson, Nicolas Férey, Olivier Magneau, Pierre-Emmanuel Gros, François Képès, Rachid Gherbi
2004 J jnl
Transcription/replication collisions cause bacterial transcription units to be longer on the leading strand of replication.
Bioinform.
Nicolas Omont, François Képès
2003 J jnl
Codon adaptation index as a measure of dominating codon bias.
Bioinform.
Alessandra Carbone, Andrei Yu. Zinovyev, François Képès