Frank Eisenhaber

38 papers B 1Journal 37
YearRankTypeTitle / Venue / Authors
2023 J jnl
Generalized metabolic flux analysis framework provides mechanism-based predictions of ophthalmic complications in type 2 diabetes patients.
Health Inf. Sci. Syst.
Arsen O. Batagov, Rinkoo Dalan, Andrew Wu, Wenbin Lai, Colin S. Tan, Frank Eisenhaber
2019 J jnl
AllerCatPro - prediction of protein allergenicity potential from the protein sequence.
Bioinform.
Sebastian Maurer-Stroh, Nora L. Krutz, Petra S. Kern, Vithiagaran Gunalan, Minh N. Nguyen, Vachiranee Limviphuvadh, Frank Eisenhaber, G. Frank Gerberick
2019 J jnl
In Memory of Vladimir B. Bajic (1952-2019).
Genom. Proteom. Bioinform.
Zhang Zhang, Jun Yu, Frank Eisenhaber, Xin Gao, Takashi Gojobori
2019 J jnl
Translational Informatics Management System (TIMS): Towards OMICS based clinical data management for long term curation of clinical studies.
J. Open Source Softw.
Weihong Tay, Erwin Tantoso, Frank Eisenhaber, Wing-Cheong Wong
2015 J jnl
HPMV: Human protein mutation viewer - relating sequence mutations to protein sequence architecture and function changes.
J. Bioinform. Comput. Biol.
Westley Arthur Sherman, Durga Kuchibhatla, Vachiranee Limviphuvadh, Sebastian Maurer-Stroh, Birgit Eisenhaber, Frank Eisenhaber
2014 J jnl
10 years for the Journal of Bioinformatics and Computational Biology (2003-2013) - A retrospective.
J. Bioinform. Comput. Biol.
Frank Eisenhaber, Westley Arthur Sherman
2014 J jnl
Guest Editorial for the International Conference on Genome Informatics (GIW 2013).
IEEE ACM Trans. Comput. Biol. Bioinform.
Frank Eisenhaber, Wing-Kin Sung, Limsoon Wong
2014 J jnl
On the necessity of dissecting sequence similarity scores into segment-specific contributions for inferring protein homology, function prediction and annotation.
BMC Bioinform.
Wing-Cheong Wong, Sebastian Maurer-Stroh, Birgit Eisenhaber, Frank Eisenhaber
2014 J jnl
Unix interfaces, Kleisli, bucandin structure, etc. - The heroic beginning of bioinformatics in Singapore.
J. Bioinform. Comput. Biol.
Frank Eisenhaber
2013 J jnl
A Simple Shortcut to Unsupervised Alignment-Free phylogenetic genome Groupings, even from Unassembled sequencing reads.
J. Bioinform. Comput. Biol.
Sebastian Maurer-Stroh, Vithiagaran Gunalan, Wing-Cheong Wong, Frank Eisenhaber
2013 J jnl
Automatic phylogenetic Classification of bacterial beta-Lactamase Sequences including Structural and Antibiotic substrate Preference Information.
J. Bioinform. Comput. Biol.
Jianmin Ma, Frank Eisenhaber, Sebastian Maurer-Stroh
2013 J jnl
How bioinformatics influences health informatics: usage of biomolecular sequences, expression profiles and automated microscopic image analyses for clinical needs and public health.
Health Inf. Sci. Syst.
Vladimir A. Kuznetsov, Hwee Kuan Lee, Sebastian Maurer-Stroh, Maria Judit Molnár, Sándor Pongor, Birgit Eisenhaber, Frank Eisenhaber
2013 J jnl
International Conference on Genome Informatics (GIW 2013) in Singapore: introduction to the systems biology contributions.
BMC Syst. Biol.
Frank Eisenhaber, Wing-Kin Sung, Limsoon Wong
2013 J jnl
Motif Discovery with Data Mining in 3D protein Structure Databases: Discovery, Validation and Prediction of the U-Shape zinc binding ("Huf-zinc") Motif.
J. Bioinform. Comput. Biol.
Sebastian Maurer-Stroh, He Gao, Hao Han, Lies Baeten, Joost Schymkowitz, Frederic Rousseau, Louxin Zhang, Frank Eisenhaber
2013 J jnl
SPACER: server for predicting allosteric communication and effects of regulation.
Nucleic Acids Res.
Alexander Goncearenco, Simon Mitternacht, Taipang Yong, Birgit Eisenhaber, Frank Eisenhaber, Igor N. Berezovsky
2013 J jnl
The 24th International Conference on genome Informatics, Giw2013, in Singapore.
J. Bioinform. Comput. Biol.
Frank Eisenhaber, Wing-Kin Sung, Limsoon Wong
2012 J jnl
A Decade after the First Full Human genome sequencing: when will We Understand our Own genome?
J. Bioinform. Comput. Biol.
Frank Eisenhaber
2012 J jnl
Beware of Moving targets: Reference proteome Content Fluctuates substantially over the Years.
J. Bioinform. Comput. Biol.
Fernanda L. Sirota, Arsen O. Batagov, Georg Schneider, Birgit Eisenhaber, Frank Eisenhaber, Sebastian Maurer-Stroh
2012 J jnl
Tachyon search speeds up retrieval of similar sequences by several orders of magnitude.
Bioinform.
Joshua Tan, Durga Kuchibhatla, Fernanda L. Sirota, Westley A. Sherman, Tobias Gattermayer, Chia Yee Kwoh, Frank Eisenhaber, Georg Schneider, Sebastian Maurer-Stroh
2012 J jnl
Transmembrane helix: simple or complex.
Nucleic Acids Res.
Wing-Cheong Wong, Sebastian Maurer-Stroh, Georg Schneider, Frank Eisenhaber
2011 J jnl
The Janus-Faced E-Values of Hmmer2: Extreme Value Distribution or logistic Function?
J. Bioinform. Comput. Biol.
Wing-Cheong Wong, Sebastian Maurer-Stroh, Frank Eisenhaber
2010 J jnl
Is Lgi2 the Candidate Gene for Partial Epilepsy with Pericentral Spikes?
J. Bioinform. Comput. Biol.
Vachiranee Limviphuvadh, Ling Ling Chua, Frank Eisenhaber, Sharmila Adhikari, Sebastian Maurer-Stroh
2010 J jnl
More Than 1, 001 Problems with Protein Domain Databases: Transmembrane Regions, Signal Peptides and the Issue of Sequence Homology.
PLoS Comput. Biol.
Wing-Cheong Wong, Sebastian Maurer-Stroh, Frank Eisenhaber
2009 J jnl
ANNIE: integrated
Nucleic Acids Res.
Hong Sain Ooi, Chia Yee Kwoh, Michael Wildpaner, Fernanda L. Sirota, Birgit Eisenhaber, Sebastian Maurer-Stroh, Wing-Cheong Wong, Alexander Schleiffer, Frank Eisenhaber, Georg Schneider
2009 J jnl
Brief Overview of Bioinformatics Activities in Singapore.
PLoS Comput. Biol.
Frank Eisenhaber, Chee Keong Kwoh, See-Kiong Ng, Wing-Kin Sung, Limsoon Wong
2007 J jnl
Towards Complete Sets of Farnesylated and Geranylgeranylated Proteins.
PLoS Comput. Biol.
Sebastian Maurer-Stroh, Manfred Koranda, Wolfgang Benetka, Georg Schneider, Fernanda L. Sirota, Frank Eisenhaber
2006 J jnl
Application of a sensitive collection heuristic for very large protein families: Evolutionary relationship between adipose triglyceride lipase (ATGL) and classic mammalian lipases.
BMC Bioinform.
Georg Schneider, Georg Neuberger, Michael Wildpaner, Sun Tian, Igor N. Berezovsky, Frank Eisenhaber
2006 J jnl
DOUTfinder - identification of distant domain outliers using subsignificant sequence similarity.
Nucleic Acids Res.
Maria Novatchkova, Georg Schneider, Richard Fritz, Frank Eisenhaber, Alexander Schleiffer
2005 J jnl
PhyloDome - visualization of taxonomic distributions of domains occurring in eukaryote protein sequence sets.
Nucleic Acids Res.
Maria Novatchkova, Michael Wildpaner, Dieter Schweizer, Frank Eisenhaber
2005 J jnl
Proteins with two SUMO-like domains in chromatin-associated complexes: The RENi (Rad60-Esc2-NIP45) family.
BMC Bioinform.
Maria Novatchkova, Andreas Bachmair, Birgit Eisenhaber, Frank Eisenhaber
2004 J jnl
TM or not TM: transmembrane protein prediction with low false positive rate using DAS-TMfilter.
Bioinform.
Miklós Cserzo, Frank Eisenhaber, Birgit Eisenhaber, István Simon
2003 J jnl
Prediction of lipid posttranslational modifications and localization signals from protein sequences: big-, NMT and PTS1.
Nucleic Acids Res.
Frank Eisenhaber, Birgit Eisenhaber, Werner Kubina, Sebastian Maurer-Stroh, Georg Neuberger, Georg Schneider, Michael Wildpaner
2003 J jnl
Reannotation of the CELO genome characterizes a set of previously unassigned open reading frames and points to novel modes of host interaction in avian adenoviruses.
BMC Bioinform.
Stefan Washietl, Frank Eisenhaber
2001 J jnl
Taxonomy workbench.
Bioinform.
Michael Wildpaner, Georg Schneider, Alexander Schleiffer, Frank Eisenhaber
1999 J jnl
Evaluation of human-readable annotation in biomolecular sequence databases with biological rule libraries.
Bioinform.
Frank Eisenhaber, Peer Bork
1998 B conf
Analysis of the position dependent amino acid probabilities and its application to the search for remote homologues.
RECOMB
Shamil R. Sunyaev, Igor V. Rodchenkov, Frank Eisenhaber, Eugene N. Kuznetsov
1995 J jnl
The Double Cubic Lattice Method: Efficient Approaches to Numerical Integration of Surface Area and Volume and to Dot Surface Contouring of Molecular Assemblies.
J. Comput. Chem.
Frank Eisenhaber, Philip Lijnzaad, Patrick Argos, Chris Sander, Michael Scharf
1993 J jnl
Improved strategy in analytic surface calculation for molecular systems: Handling of singularities and computational efficiency.
J. Comput. Chem.
Frank Eisenhaber, Patrick Argos