Frank DiMaio - RankMe

13 papers A* 1A 1B 1Journal 7Unranked 3

Year	Rank	Type	Title / Venue / Authors
2024	J	`jnl`	Growing Glycans in Rosetta: Accurate de novo glycan modeling, density fitting, and rational sequon design. PLoS Comput. Biol. Jared Adolf-Bryfogle, Jason W. Labonte, John C. Kraft, Maxim Shapovalov, Sebastian Raemisch, Thomas Lütteke, Frank DiMaio, Christopher D. Bahl, Jesper Pallesen, Neil P. King, Jeffrey J. Gray, Daniel W. Kulp, William R. Schief
2020	J	`jnl`	Efficient consideration of coordinated water molecules improves computational protein-protein and protein-ligand docking discrimination. PLoS Comput. Biol. Ryan E. Pavlovicz, Hahnbeom Park, Frank DiMaio
2019	J	`jnl`	De novo protein design by citizen scientists. Nat. Brian Koepnick, Jeff Flatten, Tamir Husain, Alex Ford, Daniel-Adriano Silva, Matthew J. Bick, Aaron Bauer, Gaohua Liu, Yojiro Ishida, Alexander Boykov, Roger D. Estep, Susan Kleinfelter, Toke Nørgård-Solano, Linda Wei, Foldit players, Gaetano T. Montelione, Frank DiMaio, Zoran Popovic, Firas Khatib, Seth Cooper, David Baker
2019	J	`jnl`	Programmable design of orthogonal protein heterodimers. Nat. Zibo Chen, Scott E. Boyken, Mengxuan Jia, Florian Busch, David Flores-Solis, Matthew J. Bick, Peilong Lu, Zachary L. VanAernum, Aniruddha Sahasrabuddhe, Robert A. Langan, Sherry Bermeo, T. J. Brunette, Vikram Khipple Mulligan, Lauren P. Carter, Frank DiMaio, Nikolaos G. Sgourakis, Vicki H. Wysocki, David Baker
2017	J	`jnl`	Cryo-EM structure of the protein-conducting ERAD channel Hrd1 in complex with Hrd3. Nat. Stefan Schoebel, Wei Mi, Alexander Stein, Sergey Ovchinnikov, Ryan E. Pavlovicz, Frank DiMaio, David Baker, Melissa G. Chambers, Huayou Su, Dongsheng Li, Tom A. Rapoport, Maofu Liao
2009	J	`jnl`	Spherical-harmonic decomposition for molecular recognition in electron-density maps. Int. J. Data Min. Bioinform. Frank DiMaio, Ameet Soni, George N. Phillips, Jude W. Shavlik
2007	J	`jnl`	Creating protein models from electron-density maps using particle-filtering methods. Bioinform. Frank DiMaio, Dmitry A. Kondrashov, Eduard Bitto, Ameet Soni, Craig A. Bingman, George N. Phillips Jr., Jude W. Shavlik
2007	—	`conf`	Improved Methods for Template-Matching in Electron-Density Maps Using Spherical Harmonics. BIBM Frank DiMaio, Ameet Soni, George N. Phillips, Jude W. Shavlik
2006	—	`conf`	A probabilistic approach to protein backbone tracing in electron density maps. ISMB (Supplement of Bioinformatics) Frank DiMaio, Jude W. Shavlik, George N. Phillips
2006	A*	`conf`	Belief Propagation in Large, Highly Connected Graphs for 3D Part-Based Object Recognition. ICDM Frank DiMaio, Jude W. Shavlik
2004	B	`conf`	Learning an Approximation to Inductive Logic Programming Clause Evaluation. ILP Frank DiMaio, Jude W. Shavlik
2004	A	`conf`	Numeric Domains with Summarized Dimensions. TACAS Denis Gopan, Frank DiMaio, Nurit Dor, Thomas W. Reps, Shmuel Sagiv
2004	—	`conf`	Pictorial Structures for Molecular Modeling: Interpreting Density Maps. NIPS Frank DiMaio, Jude W. Shavlik, George N. Phillips